Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 2.5e-87 325.5 170 100.0
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.6e-54 216.5 130 92.3
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 1.4e-34 150.2 137 65.0
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 5.6e-31 138.3 134 60.4
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 7.3e-31 137.9 144 54.2
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 1.6e-30 136.7 136 61.8
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 2.8e-30 136.0 133 60.9
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 6.2e-30 134.8 144 54.2
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 2.3e-29 132.9 150 54.7
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 5.2e-29 131.7 146 60.3
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 6.8e-29 131.3 135 60.0
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 2.2e-27 126.3 140 58.6
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 6.4e-27 124.8 134 55.2
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 8.4e-27 124.4 139 57.6
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 8.4e-27 124.4 136 58.1
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 2.4e-26 122.9 137 58.4
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 2.4e-26 122.9 138 55.8
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 4.1e-26 122.1 142 52.8
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 4.1e-26 122.1 141 55.3
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 7.1e-26 121.3 136 55.1
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 1.2e-25 120.6 149 53.7
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 1.6e-25 120.2 127 52.8
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 2.7e-25 119.4 88 68.2
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 2.7e-25 119.4 88 68.2
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 2.7e-25 119.4 155 52.3
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.5e-25 119.0 144 50.7
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 1.0e-24 117.5 133 53.4
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 1.7e-24 116.7 138 51.4
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 2.3e-24 116.3 143 52.4
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 3.0e-24 115.9 141 54.6
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 5.1e-24 115.2 137 51.8
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 6.6e-24 114.8 136 54.4
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 6.6e-24 114.8 162 47.5
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 8.6e-24 114.4 138 51.4
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 4.3e-23 112.1 162 46.9
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 4.7e-22 108.6 146 50.0
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 6.2e-22 108.2 114 57.9
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 1.4e-21 107.1 103 60.2
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 1.4e-21 107.1 89 62.9
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.4e-21 106.3 144 47.2
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 2.4e-21 106.3 89 62.9
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 2.4e-21 106.3 89 62.9
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 3.1e-21 105.9 91 64.8
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 5.2e-21 105.1 113 54.9
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 1.2e-20 104.0 200 39.5
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 1.2e-20 104.0 102 57.8
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 1.2e-20 104.0 144 49.3
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.5e-20 103.6 117 52.1
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 1.5e-20 103.6 86 65.1
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 2.0e-20 103.2 120 53.3
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 2.0e-20 103.2 135 51.9
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 3.4e-20 102.4 90 61.1
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 3.4e-20 102.4 136 50.7
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 4.4e-20 102.1 114 55.3
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.3e-19 100.5 92 63.0
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 1.3e-19 100.5 92 63.0
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 2.2e-19 99.8 121 53.7
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 2.9e-19 99.4 100 58.0
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 2.9e-19 99.4 165 43.6
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.1e-18 97.4 135 50.4
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 1.4e-18 97.1 121 52.9
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.4e-18 97.1 137 49.6
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 2.4e-18 96.3 115 49.6
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 2.4e-18 96.3 103 54.4
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 4.2e-18 95.5 92 58.7
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 5.4e-18 95.1 88 62.5
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 1.2e-17 94.0 142 45.8
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.6e-17 93.6 142 46.5
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.6e-17 93.6 142 46.5
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 2.7e-17 92.8 134 46.3
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-17 92.4 137 47.4
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 3.5e-17 92.4 85 56.5
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 3.5e-17 92.4 116 50.0
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 6.0e-17 91.7 142 45.8
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 1.0e-16 90.9 138 48.6
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 1.3e-16 90.5 145 44.1
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 3.0e-16 89.4 134 42.5
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 3.0e-16 89.4 140 45.7
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 5.1e-16 88.6 142 44.4
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 5.1e-16 88.6 142 44.4
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 8.7e-16 87.8 112 48.2
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 1.5e-15 87.0 150 46.7
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.9e-15 86.7 71 64.8
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 3.3e-15 85.9 111 47.7
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 3.3e-15 85.9 135 43.0
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 7.3e-15 84.7 100 50.0
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 9.6e-15 84.3 125 46.4
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 9.6e-15 84.3 125 46.4
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 9.6e-15 84.3 137 41.6
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 2.1e-14 83.2 123 44.7
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 4.8e-14 82.0 143 39.2
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 4.8e-14 82.0 122 45.9
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 3.1e-13 79.3 89 52.8
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 4.0e-13 79.0 99 48.5
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 9.0e-13 77.8 147 37.4
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 1.2e-12 77.4 132 41.7
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 2.0e-12 76.6 81 55.6
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 7.1e-10 68.2 74 55.4
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 9.3e-10 67.8 140 40.0
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 1.2e-09 67.4 107 43.0
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 1.2e-09 67.4 133 35.3
Os01g0940600 Oryza sativa ssp. japonica HOM05D007435 ORTHO05D009338 1.6e-09 67.0 141 39.0
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 6.0e-09 65.1 87 47.1
Glyma.04G142000 Glycine max HOM05D007435 ORTHO05D009338 3.7e-06 55.8 86 37.2


User provided reference genes

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