Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR057G0001 Trochodendron aralioides HOM05D009417 ORTHO05D011990 6.0e-115 417.5 214 100.0
TAR063G0002 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.1e-23 114.4 122 53.3
TAR368G0001 Trochodendron aralioides HOM05D009417 ORTHO05D011990 9.5e-20 101.3 126 44.4
TAR626G0829 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.0e-18 95.9 144 40.3
TAR622G1424 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.5e-17 94.0 86 60.5
TAR630G0005 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.5e-17 94.0 121 47.9
TAR346G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 2.0e-17 93.6 154 39.6
TAR374G0904 Trochodendron aralioides HOM05D000350 ORTHO05D000228 1.3e-16 90.9 114 47.4
TAR362G0668 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.1e-15 87.8 122 45.9
TAR383G0324 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.1e-15 87.8 134 39.6
TAR648G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.4e-15 87.4 120 42.5
TAR351G0004 Trochodendron aralioides HOM05D000003 ORTHO05D009135 5.4e-15 85.5 108 46.3
TAR381G0792 Trochodendron aralioides HOM05D009417 ORTHO05D011990 6.0e-14 82.0 94 47.9
TAR627G0002 Trochodendron aralioides HOM05D009417 ORTHO05D016486 1.0e-13 81.3 109 48.6
TAR131G0003 Trochodendron aralioides HOM05D000003 ORTHO05D011990 1.5e-12 77.4 92 50.0
TAR628G0770 Trochodendron aralioides HOM05D009417 ORTHO05D011990 9.6e-12 74.7 87 50.6
TAR633G1731 Trochodendron aralioides HOM05D000156 ORTHO05D004238 1.6e-11 73.9 110 40.9
TAR636G1384 Trochodendron aralioides HOM05D030389 ORTHO05D011990 1.6e-11 73.9 152 34.2
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 6.2e-11 72.0 121 35.5
TAR628G1598 Trochodendron aralioides HOM05D000255 ORTHO05D000935 1.4e-10 70.9 74 52.7
TAR626G0952 Trochodendron aralioides HOM05D006825 ORTHO05D008510 2.4e-10 70.1 108 39.8
TAR362G0061 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.0e-10 69.3 86 44.2
TAR383G0586 Trochodendron aralioides HOM05D001119 ORTHO05D000862 4.0e-10 69.3 120 37.5
TAR382G0001 Trochodendron aralioides HOM05D002431 ORTHO05D002543 6.9e-10 68.6 105 43.8
MBI19_g18857_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.6e-09 66.6 94 39.4
Aqoxy1G02301 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 3.4e-09 66.2 95 40.0
Ah.12g061120 Amaranthus hybridus HOM05D000003 ORTHO05D000167 4.4e-09 65.9 122 36.9
Sopen11g007990 Solanum pennellii HOM05D000155 ORTHO05D000022 4.4e-09 65.9 108 34.3
Cc05_g02910 Coffea canephora HOM05D000003 ORTHO05D000004 1.3e-08 64.3 109 33.9
TAR628G1431 Trochodendron aralioides HOM05D001173 ORTHO05D001047 1.7e-08 63.9 125 33.6
MBI06_g07357_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.9e-08 62.4 161 31.1
TAR622G0588 Trochodendron aralioides HOM05D000003 ORTHO05D000167 4.9e-08 62.4 120 31.7
Atru.chr13.1294 Acer truncatum HOM05D000003 ORTHO05D000167 8.4e-08 61.6 105 35.2
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 8.4e-08 61.6 111 32.4
Sopen11g008100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.4e-08 61.6 101 34.7
TAR636G1417 Trochodendron aralioides HOM05D001763 ORTHO05D001810 8.4e-08 61.6 94 37.2
Atru.chr13.2346 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-07 61.2 164 29.9
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.1e-07 61.2 121 33.1
RcHm_v2.0_Chr6g0260491 Rosa chinensis HOM05D000003 ORTHO05D006737 1.1e-07 61.2 108 36.1
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 1.4e-07 60.8 111 32.4
PSO578G0006 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 60.5 118 26.3
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 1.9e-07 60.5 111 32.4
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 1.9e-07 60.5 111 32.4
MBI01_g01265_MAGBIO Magnolia biondii HOM05D000597 ORTHO05D000603 2.4e-07 60.1 140 31.4
VMungo1080G0380 Vigna mungo HOM05D000155 ORTHO05D000022 2.4e-07 60.1 110 34.5
Atru.chr2.1954 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-07 59.7 118 30.5
Atru.chr3.843 Acer truncatum HOM05D000003 ORTHO05D000167 3.2e-07 59.7 106 35.8
MBI19_g02932_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.2e-07 59.7 104 36.5
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 4.2e-07 59.3 120 35.0
CANSAT01G3289 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-07 59.3 146 28.8
MBI18_g17021_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.2e-07 59.3 121 36.4
TAR383G0103 Trochodendron aralioides HOM05D000850 ORTHO05D000266 4.2e-07 59.3 108 37.0
VMungo0647G2109 Vigna mungo HOM05D000155 ORTHO05D000022 4.2e-07 59.3 121 33.1
FvH4_2g34753 Fragaria vesca HOM05D000003 ORTHO05D014221 5.4e-07 58.9 120 29.2
FAN09G3474 Fragaria x ananassa HOM05D000003 ORTHO05D006737 5.4e-07 58.9 111 34.2
MBI05_g14865_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.4e-07 58.9 90 35.6
FvH4_6g11620 Fragaria vesca HOM05D008133 ORTHO05D009449 7.1e-07 58.5 118 31.4
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 7.1e-07 58.5 109 33.9
RcHm_v2.0_Chr3g0468731 Rosa chinensis HOM05D008097 ORTHO05D010102 7.1e-07 58.5 119 30.3
TAR376G1124 Trochodendron aralioides HOM05D001975 ORTHO05D002436 7.1e-07 58.5 110 32.7
TAR627G0075 Trochodendron aralioides HOM05D000033 ORTHO05D001614 7.1e-07 58.5 62 50.0
VMungo0647G1401 Vigna mungo HOM05D000155 ORTHO05D000022 7.1e-07 58.5 108 36.1
Aqoxy1G04201 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 9.3e-07 58.2 90 36.7
Lj1g0015022 Lotus japonicus HOM05D000003 ORTHO05D000167 9.3e-07 58.2 124 30.6
MBI15_g21039_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.3e-07 58.2 124 33.9
MBI16_g37125_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.3e-07 58.2 102 34.3
Prupe.4G245300 Prunus persica HOM05D000155 ORTHO05D000022 9.3e-07 58.2 84 41.7
FvH4_2g09751 Fragaria vesca HOM05D008097 ORTHO05D010102 1.2e-06 57.8 112 31.2
MBI18_g33700_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.8 110 35.5
SEGI_19006 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 1.2e-06 57.8 117 31.6
TAR622G0304 Trochodendron aralioides HOM05D000475 ORTHO05D000343 1.2e-06 57.8 57 56.1
TAR627G0790 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.2e-06 57.8 63 54.0
Aqoxy7G01905 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 1.6e-06 57.4 86 38.4
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 57.4 161 28.0
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.6e-06 57.4 130 33.1
FvH4_1g25610 Fragaria vesca HOM05D000003 ORTHO05D000004 1.6e-06 57.4 89 38.2
MBI18_g07350_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.6e-06 57.4 86 36.0
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 1.6e-06 57.4 121 33.9
Sopen05g017830 Solanum pennellii HOM05D000004 ORTHO05D000022 1.6e-06 57.4 92 37.0
TAR362G1269 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.6e-06 57.4 102 36.3
TAR626G1572 Trochodendron aralioides HOM05D009417 ORTHO05D011990 1.6e-06 57.4 58 56.9
Atru.chr13.1170 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 57.0 123 30.1
CANSAT11G0139 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 57.0 132 31.8
COL.COLO4_15333 Corchorus olitorius HOM05D064659 ORTHO05D000022 2.1e-06 57.0 107 38.3
MBI09_g40762_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-06 57.0 95 37.9
Sopen00g003380 Solanum pennellii HOM05D000155 ORTHO05D000022 2.1e-06 57.0 93 34.4
Sopen00g003540 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 57.0 93 34.4
MBI08_g23501_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 108 32.4
MBI14_g01722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 106 35.8
MBI15_g25771_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 114 35.1
MBI16_g36778_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 85 40.0
MBI18_g42764_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 86 39.5
MBI19_g41377_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.7e-06 56.6 85 42.4
TAR449G0002 Trochodendron aralioides HOM05D000003 ORTHO05D008897 2.7e-06 56.6 106 32.1
Atru.chr4.2367 Acer truncatum HOM05D000003 ORTHO05D000167 3.5e-06 56.2 118 31.4
COL.COLO4_20671 Corchorus olitorius HOM05D000003 ORTHO05D000167 3.5e-06 56.2 134 33.6
MBI01_g24432_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.5e-06 56.2 107 35.5
MBI19_g25225_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.5e-06 56.2 88 35.2
vmacro16161 Vaccinium macrocarpon HOM05D000068 ORTHO05D000084 3.5e-06 56.2 150 32.0
BolC5t29232H Brassica oleracea HOM05D004976 ORTHO05D004851 4.6e-06 55.8 128 25.8
CANSAT54G2688 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 55.8 103 32.0
AUR62005037 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.6e-06 55.8 121 33.9
MBI08_g39945_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-06 55.8 93 38.7
MBI09_g03206_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-06 55.8 88 37.5
MBI18_g13610_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.6e-06 55.8 94 36.2
TAR625G0864 Trochodendron aralioides HOM05D038948 ORTHO05D011990 4.6e-06 55.8 117 33.3
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-06 55.5 120 34.2
Lj4g0025065 Lotus japonicus HOM05D000155 ORTHO05D000022 6.0e-06 55.5 143 30.1
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 6.0e-06 55.5 164 28.0
MBI02_g46016_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-06 55.5 93 37.6
MBI08_g11775_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-06 55.5 88 43.2
MBI17_g31745_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-06 55.5 102 37.3
MBI18_g20082_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-06 55.5 106 35.8
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 6.0e-06 55.5 135 31.9
TWI60G0205 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 6.0e-06 55.5 127 33.9
Aqoxy1G03382 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 7.8e-06 55.1 89 39.3
Aqoxy2G01515 Aquilegia oxysepala HOM05D000003 ORTHO05D000651 7.8e-06 55.1 90 32.2
EL10Ac9g23004 Beta vulgaris HOM05D000003 ORTHO05D000004 7.8e-06 55.1 89 38.2
MBI14_g13525_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.8e-06 55.1 131 35.9
MBI16_g10839_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.8e-06 55.1 94 34.0
MBI18_g23800_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.8e-06 55.1 88 36.4
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 7.8e-06 55.1 122 31.1
PGSC0003DMG400034828 Solanum tuberosum HOM05D000155 ORTHO05D000022 7.8e-06 55.1 83 41.0
TAR624G1240 Trochodendron aralioides HOM05D000155 ORTHO05D000022 7.8e-06 55.1 120 28.3


User provided reference genes

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