Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR054G0001 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.5e-36 155.6 74 100.0
TAR641G0002 Trochodendron aralioides HOM05D000072 ORTHO05D000026 5.2e-34 147.1 74 94.6
TAR050G0003 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.2e-32 141.7 74 91.9
TAR047G0001 Trochodendron aralioides HOM05D000072 ORTHO05D000026 2.1e-30 135.2 73 89.0
TAR383G0101 Trochodendron aralioides HOM05D000072 ORTHO05D000026 1.3e-27 125.9 75 85.3
Dinv08180 Davidia involucrata HOM05D000072 ORTHO05D000026 1.6e-19 99.0 73 64.4
CSS0030677 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.1e-18 94.7 74 64.9
MSTRG.17635 Avicennia marina HOM05D000072 ORTHO05D000026 5.3e-18 94.0 72 65.3
RhsimUnG0158600 Rhododendron simsii HOM05D000072 ORTHO05D000026 9.0e-18 93.2 73 63.0
Oeu061701.1 Olea europaea HOM05D000072 ORTHO05D000026 1.5e-17 92.4 72 66.7
GSVIVG01035532001 Vitis vinifera HOM05D000072 ORTHO05D000026 1.5e-17 92.4 72 61.1
Rhsim11G0030700 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.6e-17 91.7 75 62.7
Rhsim11G0031100 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.5e-17 90.9 73 63.0
RhsimUnG0158500 Rhododendron simsii HOM05D000072 ORTHO05D000026 7.6e-17 90.1 75 62.7
Rhsim11G0030900 Rhododendron simsii HOM05D000072 ORTHO05D000026 2.2e-16 88.6 73 63.0
Dinv00928 Davidia involucrata HOM05D000072 ORTHO05D000026 3.8e-16 87.8 71 62.0
Dinv00929 Davidia involucrata HOM05D008376 ORTHO05D000026 3.8e-16 87.8 71 62.0
Dinv05069 Davidia involucrata HOM05D000072 ORTHO05D000026 3.8e-16 87.8 71 62.0
Dinv07771 Davidia involucrata HOM05D008376 ORTHO05D000026 3.8e-16 87.8 71 62.0
Migut.D00668 Erythranthe guttata HOM05D000072 ORTHO05D000026 3.8e-16 87.8 73 58.9
Rhsim01G0063100 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.4e-15 85.9 80 56.2
Rhsim11G0029800 Rhododendron simsii HOM05D000072 ORTHO05D000026 1.9e-15 85.5 73 65.8
CSS0012927 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 7.1e-15 83.6 74 59.5
Lj7P742T19 Lonicera japonica HOM05D000072 ORTHO05D000026 1.2e-14 82.8 72 56.9
vmacro00246 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.6e-14 82.4 81 59.3
PSO170G4127 Papaver somniferum HOM05D000072 ORTHO05D000026 2.1e-14 82.0 74 58.1
vmacro00258 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.3e-13 79.3 73 56.2
vmacro00249 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.8e-13 79.0 75 60.0
vmacro00250 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.8e-13 79.0 75 60.0
CSS0049233 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.0e-13 78.2 74 58.1
Oeu061703.1 Olea europaea HOM05D000072 ORTHO05D000026 1.1e-12 76.3 75 60.0
Sed0006004 Sechium edule HOM05D000072 ORTHO05D000026 1.1e-12 76.3 74 54.1
Sed0012290 Sechium edule HOM05D000072 ORTHO05D000026 2.5e-12 75.1 76 53.9
MELO3C003635.2 Cucumis melo HOM05D000072 ORTHO05D000026 3.3e-12 74.7 77 54.5
Rhsim11G0031500 Rhododendron simsii HOM05D000072 ORTHO05D000026 4.3e-12 74.3 81 50.6
CsaV3_3G047020 Cucumis sativus L. HOM05D000072 ORTHO05D000026 5.6e-12 73.9 72 58.3
MELO3C003634.2 Cucumis melo HOM05D000072 ORTHO05D000026 1.3e-11 72.8 72 56.9
CSS0030037 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 1.6e-11 72.4 74 51.4
ClCG05G017520 Citrullus lanatus HOM05D000072 ORTHO05D000026 1.6e-11 72.4 74 54.1
vmacro00247 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.7e-11 71.2 83 50.6
CSS0025730 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 8.1e-11 70.1 74 47.3
PSO063G2928 Papaver somniferum HOM05D000072 ORTHO05D000026 3.1e-10 68.2 72 52.8
vmacro00251 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.1e-10 68.2 62 56.5
CiPaw.08G019200 Carya illinoinensis HOM05D000072 ORTHO05D000026 6.9e-10 67.0 60 63.3
CsaV3_3G047030 Cucumis sativus L. HOM05D000072 ORTHO05D000026 1.5e-09 65.9 82 50.0
Sed0016341 Sechium edule HOM05D000072 ORTHO05D000026 1.5e-09 65.9 82 46.3
CSS0004032 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.0e-09 65.5 74 50.0
CSS0007695 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.0e-09 65.5 61 57.4
CSS0031705 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 2.0e-09 65.5 61 57.4
CsaV3_3G047010 Cucumis sativus L. HOM05D000072 ORTHO05D000026 4.5e-09 64.3 77 48.1
Sed0024060 Sechium edule HOM05D000072 ORTHO05D000026 5.8e-09 63.9 74 50.0
PSO170G2699 Papaver somniferum HOM05D000072 ORTHO05D000026 7.6e-09 63.5 72 50.0
vmacro00262 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 7.6e-09 63.5 54 55.6
Ciclev10010482m.g Citrus clementina HOM05D000072 ORTHO05D000026 1.7e-08 62.4 67 52.2
MELO3C003633.2 Cucumis melo HOM05D000072 ORTHO05D000026 1.7e-08 62.4 75 48.0
Ciclev10010327m.g Citrus clementina HOM05D000072 ORTHO05D000026 2.9e-08 61.6 68 50.0
Nn1g06170 Nelumbo nucifera HOM05D000072 ORTHO05D000026 2.9e-08 61.6 74 48.6
Nn1g06169 Nelumbo nucifera HOM05D000072 ORTHO05D000026 1.4e-07 59.3 77 44.2
Lj7P742T17 Lonicera japonica HOM05D000072 ORTHO05D000026 2.5e-07 58.5 72 52.8
Sed0019573 Sechium edule HOM05D000072 ORTHO05D000026 2.5e-07 58.5 73 46.6
TAR626G1178 Trochodendron aralioides HOM05D000072 ORTHO05D000026 9.3e-07 56.6 72 45.8
TAR626G0014 Trochodendron aralioides HOM05D000072 ORTHO05D000026 7.9e-06 53.5 71 42.3


User provided reference genes

Program Settings