Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR040G0004 Trochodendron aralioides HOM05D009698 ORTHO05D015199 1.2e-39 166.0 80 100.0
TAR633G1500 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.7e-35 149.8 79 91.1
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-34 148.3 79 88.6
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-34 148.3 79 88.6
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.3e-34 147.5 79 88.6
TAR374G1072 Trochodendron aralioides HOM05D001201 ORTHO05D001100 5.7e-34 147.1 79 88.6
TAR371G1187 Trochodendron aralioides HOM05D001982 ORTHO05D003938 6.9e-32 140.2 79 84.8
TAR369G0920 Trochodendron aralioides HOM05D000046 ORTHO05D000457 1.9e-21 105.5 57 87.7
TAR636G0607 Trochodendron aralioides HOM05D001001 ORTHO05D000808 2.7e-20 101.7 57 84.2
TAR371G0452 Trochodendron aralioides HOM05D000122 ORTHO05D002085 3.6e-20 101.3 64 79.7
TAR636G2298 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.8e-19 99.0 72 65.3
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-19 97.8 71 63.4
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-19 97.4 77 55.8
TAR365G0205 Trochodendron aralioides HOM05D000141 ORTHO05D000385 5.1e-19 97.4 77 55.8
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-19 97.4 77 55.8
TAR383G0561 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.1e-19 97.4 77 57.1
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 5.1e-19 97.4 77 55.8
TAR625G0072 Trochodendron aralioides HOM05D009698 ORTHO05D000385 5.1e-19 97.4 72 63.9
TAR622G0230 Trochodendron aralioides HOM05D009698 ORTHO05D000385 6.7e-19 97.1 73 64.4
TAR624G0498 Trochodendron aralioides HOM05D000007 ORTHO05D000017 6.7e-19 97.1 70 68.6
TAR626G1293 Trochodendron aralioides HOM05D009698 ORTHO05D000385 8.8e-19 96.7 70 68.6
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-18 96.3 77 54.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-18 96.3 77 54.5
TAR623G0180 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.6e-18 95.1 77 62.3
TAR633G1163 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.6e-18 95.1 71 66.2
TAR626G1251 Trochodendron aralioides HOM05D009698 ORTHO05D000385 3.7e-17 91.3 72 59.7
TAR633G0817 Trochodendron aralioides HOM05D009698 ORTHO05D000385 6.3e-17 90.5 70 62.9
TAR383G0938 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.1e-16 89.7 72 59.7
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.3e-16 87.4 70 60.0
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.6e-15 85.9 52 78.8
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 2.6e-15 85.1 77 53.2
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.6e-15 85.1 77 53.2
TAR627G0996 Trochodendron aralioides HOM05D020484 ORTHO05D000385 3.5e-15 84.7 67 67.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 5.9e-15 84.0 71 56.3
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-14 83.2 70 55.7
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-14 83.2 72 51.4
TAR078G0002 Trochodendron aralioides HOM05D001440 ORTHO05D000385 1.0e-14 83.2 77 51.9
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-14 82.8 69 53.6
TAR626G1487 Trochodendron aralioides HOM05D002665 ORTHO05D002991 5.0e-14 80.9 46 89.1
MBI15_g14066_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-14 80.5 67 55.2
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.5e-13 79.3 78 46.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-13 79.0 72 50.0
TAR629G1726 Trochodendron aralioides HOM05D000969 ORTHO05D000899 5.5e-13 77.4 54 68.5
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 9.4e-13 76.6 71 47.9
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.4e-13 76.6 74 50.0
TAR629G1660 Trochodendron aralioides HOM05D000186 ORTHO05D001124 1.2e-12 76.3 43 81.4
TAR628G0164 Trochodendron aralioides HOM05D000317 ORTHO05D000032 1.6e-12 75.9 43 83.7
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-12 75.5 77 49.4
TAR625G1047 Trochodendron aralioides HOM05D009698 ORTHO05D015199 2.7e-12 75.1 47 72.3
vmacro00660 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 2.7e-12 75.1 70 50.0
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.6e-12 74.7 66 51.5
TAR375G1082 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.7e-12 74.3 52 65.4
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.1e-12 73.9 72 50.0
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.1e-12 73.9 72 50.0
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.1e-12 73.9 72 50.0
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.1e-12 73.9 70 51.4
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 8.0e-12 73.6 45 80.0
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.0e-11 73.2 70 51.4
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.4e-11 72.8 70 51.4
TAR626G0324 Trochodendron aralioides HOM05D000774 ORTHO05D000602 1.4e-11 72.8 58 56.9
TAR472G0003 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.8e-11 72.4 71 52.1
TAR381G0798 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-11 72.0 71 49.3
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.0e-11 71.6 74 43.2
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-11 71.6 70 47.1
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-11 71.2 72 47.2
TAR629G1907 Trochodendron aralioides HOM05D001225 ORTHO05D000239 4.0e-11 71.2 65 56.9
vmacro00665 Vaccinium macrocarpon HOM05D015585 ORTHO05D000385 6.7e-11 70.5 72 45.8
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.8e-11 70.1 70 50.0
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.1e-10 69.7 74 43.2
TAR627G0151 Trochodendron aralioides HOM05D000054 ORTHO05D000171 1.1e-10 69.7 47 70.2
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.5e-10 69.3 71 46.5
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 2.0e-10 68.9 67 47.8
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.0e-10 68.9 76 42.1
MBI10_g17725_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.6e-10 68.6 70 52.9
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.3e-10 68.2 69 43.5
MBI14_g03116_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-10 68.2 72 40.3
TAR709G0001 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.3e-10 68.2 45 75.6
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.7e-10 67.4 70 48.6
MBI19_g00150_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.5e-10 67.0 70 52.9
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 9.7e-10 66.6 78 41.0
TAR636G1311 Trochodendron aralioides HOM05D004298 ORTHO05D023169 9.7e-10 66.6 53 58.5
vmacro22505 Vaccinium macrocarpon HOM05D015585 ORTHO05D015199 9.7e-10 66.6 72 44.4
MBI02_g14797_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-09 66.2 79 41.8
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-09 66.2 70 51.4
vmacro21218 Vaccinium macrocarpon HOM05D015585 ORTHO05D010960 1.3e-09 66.2 70 47.1
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 1.7e-09 65.9 71 40.8
MBI09_g41431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-09 65.9 70 51.4
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.7e-09 65.9 78 39.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.7e-09 64.7 74 40.5
QL02p084387 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-09 64.7 72 40.3
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-09 64.3 68 50.0
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 8.2e-09 63.5 71 43.7
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.8e-08 62.4 80 38.8
TAR633G0004 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.8e-08 62.4 53 56.6
TAR629G2343 Trochodendron aralioides HOM05D000132 ORTHO05D000058 2.4e-08 62.0 64 48.4
MD16G1158000 Malus domestica HOM05D020638 ORTHO05D015199 3.1e-08 61.6 76 43.4
TAR376G0609 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.1e-08 61.2 53 58.5
TAR625G1016 Trochodendron aralioides HOM05D020484 ORTHO05D000385 4.1e-08 61.2 46 71.7
MBI05_g40696_MAGBIO Magnolia biondii HOM05D001399 ORTHO05D000385 5.3e-08 60.8 70 48.6
Rhsim11G0004700 Rhododendron simsii HOM05D015585 ORTHO05D000385 7.0e-08 60.5 61 45.9
RcHm_v2.0_Chr6g0306091 Rosa chinensis HOM05D020638 ORTHO05D015199 7.0e-08 60.5 64 48.4
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 9.1e-08 60.1 71 40.8
Cpa.g.sc113.47 Carica papaya HOM05D005763 ORTHO05D005970 1.6e-07 59.3 71 35.2
Rhsim11G0013700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.6e-07 59.3 65 46.2
RcHm_v2.0_Chr6g0278661 Rosa chinensis HOM05D020638 ORTHO05D015199 1.6e-07 59.3 47 57.4
Nn5g26983 Nelumbo nucifera HOM05D029553 ORTHO05D000385 2.0e-07 58.9 67 47.8
arahy.Tifrunner.gnm1.ann1.SC3PTI Arachis hypogaea HOM05D010482 ORTHO05D000385 2.7e-07 58.5 75 36.0
TAR624G1041 Trochodendron aralioides HOM05D028945 ORTHO05D000385 2.7e-07 58.5 42 66.7
RcHm_v2.0_Chr1g0322121 Rosa chinensis HOM05D020638 ORTHO05D015199 3.5e-07 58.2 50 52.0
TAR369G0908 Trochodendron aralioides HOM05D009698 ORTHO05D000385 3.5e-07 58.2 47 61.7
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 4.5e-07 57.8 72 37.5
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 4.5e-07 57.8 72 37.5
TAR627G0384 Trochodendron aralioides HOM05D000664 ORTHO05D000491 4.5e-07 57.8 30 86.7
Atru.chr3.1415 Acer truncatum HOM05D005012 ORTHO05D005886 7.7e-07 57.0 84 40.5
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 7.7e-07 57.0 71 38.0
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.7e-07 57.0 71 43.7
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.3e-06 56.2 75 34.7
TAR627G1137 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.3e-06 56.2 29 86.2
arahy.Tifrunner.gnm1.ann1.LQJ2G8 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.2e-06 55.5 72 37.5
arahy.Tifrunner.gnm1.ann1.465ER6 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.9e-06 55.1 72 36.1
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-06 55.1 70 38.6
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-06 55.1 70 41.4
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.9e-06 55.1 70 41.4
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-06 54.7 70 38.6
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-06 54.7 70 38.6
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-06 54.7 70 38.6
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.8e-06 54.7 70 38.6
MD02G1315300 Malus domestica HOM05D008315 ORTHO05D009452 3.8e-06 54.7 71 38.0
Nn7g37991 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.8e-06 54.7 76 35.5
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.0e-06 54.3 70 38.6
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.0e-06 54.3 74 32.4
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 5.0e-06 54.3 74 32.4
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.0e-06 54.3 47 51.1
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.0e-06 54.3 47 51.1
Atru.chr2.1590 Acer truncatum HOM05D035676 ORTHO05D015199 6.5e-06 53.9 82 40.2
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.5e-06 53.5 77 36.4
MBI16_g15341_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.5e-06 53.5 53 50.9


User provided reference genes

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