Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 3.1e-190 668.3 335 100.0
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 3.1e-142 508.8 318 78.6
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 6.3e-127 458.0 319 71.5
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 2.6e-125 452.6 318 71.1
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 3.4e-125 452.2 319 68.3
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 4.5e-125 451.8 323 68.4
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 4.5e-125 451.8 319 70.8
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 5.9e-125 451.4 319 70.2
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 1.1e-123 447.2 319 69.9
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 7.2e-123 444.5 320 69.4
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 7.9e-122 441.0 320 69.1
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 1.0e-121 440.7 323 69.0
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 2.3e-121 439.5 319 68.3
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 3.0e-121 439.1 320 69.7
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.9e-121 438.7 320 70.0
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 1.1e-120 437.2 319 68.7
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 1.7e-119 433.3 315 68.6
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 1.7e-119 433.3 315 68.6
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.2e-117 427.2 344 63.7
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.2e-117 427.2 319 66.1
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 2.0e-117 426.4 319 66.5
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 4.5e-117 425.2 319 66.1
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 5.9e-117 424.9 319 66.5
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 5.9e-117 424.9 319 66.1
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 7.7e-117 424.5 320 65.9
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 7.7e-117 424.5 319 66.1
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.3e-116 423.7 341 64.5
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 2.9e-116 422.5 319 65.5
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 6.5e-116 421.4 346 62.4
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 6.5e-116 421.4 322 65.8
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 9.4e-115 417.5 343 62.4
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 9.4e-115 417.5 322 66.1
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.2e-114 417.2 322 66.1
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.6e-114 416.8 314 65.3
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.1e-114 414.8 322 65.5
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 8.0e-114 414.5 319 63.3
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.0e-113 414.1 319 63.9
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 1.0e-113 414.1 320 65.3
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 2.3e-113 412.9 320 63.4
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 3.0e-113 412.5 319 63.0
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.0e-113 412.5 322 64.0
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 5.2e-113 411.8 321 65.1
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 8.8e-113 411.0 319 63.3
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 8.8e-113 411.0 319 63.3
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 1.2e-112 410.6 316 63.0
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.2e-112 410.6 318 64.8
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.5e-112 410.2 319 63.0
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.5e-112 410.2 319 63.9
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 2.0e-112 409.8 321 63.2
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 7.5e-112 407.9 319 63.6
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 7.5e-112 407.9 313 62.6
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 3.7e-111 405.6 320 62.2
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 4.8e-111 405.2 319 62.7
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 1.4e-110 403.7 319 62.7
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.4e-110 403.7 322 62.7
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 3.1e-110 402.5 319 61.4
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 3.1e-110 402.5 318 63.8
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 2.7e-109 399.4 329 63.8
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.0e-108 397.5 317 63.7
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 1.0e-108 397.5 343 59.2
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 2.2e-108 396.4 319 62.4
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.1e-107 394.0 316 61.1
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.9e-107 393.3 316 61.4
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 3.2e-107 392.5 323 62.5
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 7.2e-107 391.3 315 61.0
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 7.2e-107 391.3 320 62.5
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.6e-106 390.2 318 60.7
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 8.0e-106 387.9 414 50.2
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.5e-104 383.6 316 59.5
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 7.5e-104 381.3 365 57.0
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 7.5e-104 381.3 319 60.5
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 7.5e-104 381.3 312 59.9
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 2.8e-103 379.4 312 61.2
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 6.3e-103 378.3 319 58.6
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 1.1e-102 377.5 313 59.7
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 1.5e-99 367.1 319 57.7
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 4.2e-99 365.5 319 56.7
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 4.7e-98 362.1 404 48.5
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 4.4e-96 355.5 320 56.2
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 8.3e-95 351.3 307 55.0
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.1e-94 350.9 310 58.7
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 2.4e-94 349.7 319 55.2
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.9e-91 340.1 320 56.2
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 2.8e-90 336.3 348 53.2
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 3.0e-89 332.8 270 61.1
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 4.4e-88 328.9 319 55.5
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 7.5e-88 328.2 270 61.5
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 4.9e-87 325.5 350 52.3
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 8.3e-87 324.7 353 51.3
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 1.6e-85 320.5 316 53.8
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 7.3e-83 311.6 348 51.1
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 4.0e-81 305.8 252 63.5
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 5.8e-80 302.0 313 50.8
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 9.8e-80 301.2 264 57.2
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 4.1e-78 295.8 213 70.9
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 1.2e-77 294.3 315 48.3
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 5.0e-76 288.9 214 68.2
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 2.5e-75 286.6 329 47.4
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 3.3e-75 286.2 210 69.0
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 1.9e-51 207.2 168 60.1
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 7.6e-48 195.3 210 49.0
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.9e-46 190.7 140 63.6
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 1.8e-41 174.1 350 33.1
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.1e-41 173.3 143 63.6
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 1.7e-31 141.0 351 28.2
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 4.3e-27 126.3 119 53.8
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 8.5e-15 85.5 74 54.1
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 2.5e-14 84.0 55 72.7
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 4.7e-13 79.7 125 37.6
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 1.5e-11 74.7 88 43.2
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 4.4e-11 73.2 55 56.4
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 3.7e-10 70.1 56 60.7
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 3.8e-07 60.1 83 47.0


User provided reference genes

Program Settings