Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 3.8e-57 224.6 108 100.0
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 1.8e-19 99.4 66 78.8
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.5e-18 96.3 57 82.5
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.2e-17 92.4 87 56.3
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 7.2e-16 87.4 99 50.5
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 9.4e-16 87.0 86 54.7
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.2e-15 86.7 86 54.7
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 1.2e-15 86.7 83 54.2
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-15 86.7 83 54.2
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.2e-15 86.7 53 79.2
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.6e-15 85.1 53 75.5
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 3.6e-15 85.1 84 54.8
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 3.6e-15 85.1 83 53.0
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 6.1e-15 84.3 53 77.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 6.1e-15 84.3 51 76.5
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 8.0e-15 84.0 102 48.0
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 8.0e-15 84.0 86 51.2
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 1.0e-14 83.6 53 75.5
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.0e-14 83.6 51 78.4
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.0e-14 83.6 93 52.7
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.8e-14 82.8 53 77.4
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.8e-14 82.8 84 53.6
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.3e-14 82.4 53 77.4
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 3.0e-14 82.0 83 51.8
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 3.9e-14 81.6 53 75.5
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 5.2e-14 81.3 55 69.1
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 5.2e-14 81.3 57 66.7
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 5.2e-14 81.3 51 78.4
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 6.7e-14 80.9 53 75.5
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 6.7e-14 80.9 58 67.2
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 8.8e-14 80.5 86 51.2
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 8.8e-14 80.5 83 51.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 8.8e-14 80.5 83 51.8
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 8.8e-14 80.5 51 74.5
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 8.8e-14 80.5 51 74.5
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.1e-13 80.1 81 51.9
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 1.1e-13 80.1 51 74.5
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.1e-13 80.1 57 64.9
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.1e-13 80.1 58 69.0
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.5e-13 79.7 49 77.6
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.5e-13 79.7 49 77.6
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.5e-13 79.7 85 50.6
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.5e-13 79.7 53 71.7
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.6e-13 79.0 54 72.2
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 2.6e-13 79.0 54 66.7
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 2.6e-13 79.0 54 70.4
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 2.6e-13 79.0 53 75.5
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 3.3e-13 78.6 86 51.2
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 3.3e-13 78.6 86 51.2
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 3.3e-13 78.6 58 67.2
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 3.3e-13 78.6 86 45.3
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 3.3e-13 78.6 89 43.8
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.3e-13 78.6 51 74.5
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.4e-13 78.2 50 72.0
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 4.4e-13 78.2 85 48.2
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 4.4e-13 78.2 94 45.7
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 4.4e-13 78.2 94 45.7
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 5.7e-13 77.8 86 48.8
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 5.7e-13 77.8 55 70.9
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 5.7e-13 77.8 98 43.9
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 7.4e-13 77.4 83 50.6
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 7.4e-13 77.4 54 70.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 7.4e-13 77.4 51 72.5
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 7.4e-13 77.4 51 70.6
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 7.4e-13 77.4 83 50.6
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 7.4e-13 77.4 54 66.7
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 9.7e-13 77.0 54 66.7
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 9.7e-13 77.0 51 72.5
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 9.7e-13 77.0 88 50.0
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.3e-12 76.6 51 72.5
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.7e-12 76.3 51 68.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.7e-12 76.3 51 72.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.7e-12 76.3 51 72.5
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.7e-12 76.3 87 48.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.7e-12 76.3 51 68.6
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.2e-12 75.9 83 50.6
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.2e-12 75.9 101 43.6
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.2e-12 75.9 51 72.5
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 2.8e-12 75.5 51 72.5
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 2.8e-12 75.5 51 72.5
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 2.8e-12 75.5 51 62.7
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 2.8e-12 75.5 84 50.0
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 3.7e-12 75.1 51 68.6
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 3.7e-12 75.1 51 72.5
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.7e-12 75.1 51 70.6
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.7e-12 75.1 51 70.6
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 3.7e-12 75.1 51 72.5
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 4.8e-12 74.7 82 51.2
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.3e-12 74.3 83 49.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 8.2e-12 73.9 51 70.6
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 8.2e-12 73.9 51 70.6
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 8.2e-12 73.9 51 70.6
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.1e-11 73.6 51 70.6
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.1e-11 73.6 51 68.6
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.1e-11 73.6 58 62.1
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.8e-11 72.8 51 68.6
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 3.1e-11 72.0 49 71.4
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 3.1e-11 72.0 48 68.8
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 4.1e-11 71.6 51 64.7
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.2e-10 70.1 51 68.6
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-10 70.1 101 42.6
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-10 70.1 101 42.6
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.2e-10 70.1 101 42.6
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 1.6e-10 69.7 49 67.3
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.0e-10 69.3 56 62.5
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 3.5e-10 68.6 50 68.0
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 4.5e-10 68.2 51 64.7
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.7e-09 66.2 95 43.2
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 5.0e-09 64.7 54 55.6
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.1e-08 63.5 56 55.4
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.5e-08 63.2 53 58.5
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 2.5e-08 62.4 67 46.3
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.2e-08 62.0 49 59.2
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-08 62.0 48 58.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 3.2e-08 62.0 48 60.4
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 4.2e-08 61.6 95 36.8
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-08 61.2 48 58.3
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-08 60.8 95 37.9
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-08 60.8 48 58.3
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 7.2e-08 60.8 56 50.0
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 7.2e-08 60.8 48 56.2
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.4e-08 60.5 49 55.1
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 9.4e-08 60.5 48 60.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.6e-07 59.7 42 69.0
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-07 59.7 49 51.0
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-07 59.3 48 56.2
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-07 58.9 48 50.0
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-07 58.9 48 50.0
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.7e-07 58.9 48 60.4
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 3.6e-07 58.5 69 46.4
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-07 58.5 49 55.1
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 4.7e-07 58.2 49 53.1
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 4.7e-07 58.2 49 53.1
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 4.7e-07 58.2 49 53.1
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 6.7e-06 54.3 66 43.9
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 8.8e-06 53.9 53 47.2


User provided reference genes

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