Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR009G0003 Trochodendron aralioides HOM05D008571 ORTHO05D004433 2.2e-157 558.9 279 100.0
RcHm_v2.0_Chr3g0481931 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-73 280.4 281 53.4
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 2.6e-73 279.6 264 57.2
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 2.4e-71 273.1 257 54.9
Nn1g02545 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.8e-50 203.8 258 46.5
Oeu006707.1 Olea europaea HOM05D000002 ORTHO05D004433 5.2e-50 202.2 259 43.2
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 9.1e-47 191.4 265 41.9
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-46 191.0 266 42.9
SHI47859 Sapria himalayana HOM05D000002 ORTHO05D004433 2.7e-46 189.9 266 42.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-45 186.8 264 42.0
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-44 184.5 265 41.1
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-44 181.8 268 41.4
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-43 180.3 264 41.7
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 3.6e-43 179.5 259 41.7
Oeu026048.1 Olea europaea HOM05D000002 ORTHO05D000001 8.0e-43 178.3 251 41.8
SHI27796 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-42 176.8 250 41.6
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 5.2e-42 175.6 292 40.4
SHI32918 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-42 175.3 247 41.3
SHI10030 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-42 174.9 250 41.2
SHI02070 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-41 174.1 252 42.1
Sopen12g010550 Solanum pennellii HOM05D008571 ORTHO05D011280 2.8e-40 169.9 257 41.2
SHI18424 Sapria himalayana HOM05D000002 ORTHO05D004433 6.3e-40 168.7 250 41.6
SHI39436 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-39 167.5 245 41.2
SHI39438 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-39 167.5 245 41.2
SHI10488 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-39 167.2 238 40.8
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-39 164.9 264 40.5
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-38 162.9 283 40.6
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.3e-37 161.0 325 34.5
Nn4g23986 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-37 160.6 270 36.3
CAN.G1829.1 Capsicum annuum HOM05D000583 ORTHO05D004433 2.9e-37 159.8 226 43.4
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 6.6e-37 158.7 264 39.0
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-36 157.9 280 39.3
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-36 157.1 263 39.2
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-36 156.4 283 37.8
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-35 153.7 277 37.9
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.0e-34 149.8 251 39.0
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-34 148.7 263 41.1
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-33 147.9 264 36.7
SHI43075 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-33 146.7 253 38.7
Nn1g07613 Nelumbo nucifera HOM05D000002 ORTHO05D000001 4.4e-33 146.0 248 36.7
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-33 145.2 237 41.8
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.7e-32 144.1 276 34.1
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 2.9e-32 143.3 218 41.3
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-32 143.3 258 36.8
SHI45690 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-32 142.1 240 38.3
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.4e-31 141.0 277 33.9
Sopen05g027370 Solanum pennellii HOM05D000002 ORTHO05D004433 2.4e-31 140.2 275 33.5
Nn8g40101 Nelumbo nucifera HOM05D000002 ORTHO05D004433 4.1e-31 139.4 254 37.4
SHI47495 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-31 138.7 237 38.0
ECA233G2777 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-30 137.1 264 35.6
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 2.7e-30 136.7 246 39.4
ECA234G3041 Erigeron canadensis HOM05D001549 ORTHO05D003098 4.6e-30 136.0 281 35.9
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-29 134.4 274 32.8
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-29 134.4 257 36.2
Nn8g39416 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.3e-29 134.4 249 37.8
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 3.9e-29 132.9 262 35.5
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-28 130.6 255 34.9
SHI00405 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-28 130.6 239 36.8
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-28 129.4 241 37.3
Sopen05g024280 Solanum pennellii HOM05D008571 ORTHO05D011280 2.8e-27 126.7 213 39.0
ECA233G2147 Erigeron canadensis HOM05D000509 ORTHO05D004433 1.4e-26 124.4 248 37.5
SHI18394 Sapria himalayana HOM05D000002 ORTHO05D004433 1.4e-26 124.4 250 36.4
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.8e-26 124.0 218 39.0
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.2e-26 122.5 237 37.6
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.8e-26 122.1 264 33.0
Nn1g09492 Nelumbo nucifera HOM05D000002 ORTHO05D004433 8.9e-26 121.7 162 42.0
ECA248G0669 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.6e-25 120.2 215 37.7
PGSC0003DMG400040582 Solanum tuberosum HOM05D008571 ORTHO05D011280 5.8e-25 119.0 183 39.9
Nn1g01470 Nelumbo nucifera HOM05D000002 ORTHO05D004433 1.3e-24 117.9 253 30.8
Nn1g03238 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.7e-24 117.5 161 44.7
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 2.2e-24 117.1 126 50.8
PSO675G3339 Papaver somniferum HOM05D000002 ORTHO05D004433 3.7e-24 116.3 109 47.7
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-24 115.2 119 53.8
SHI43061 Sapria himalayana HOM05D000002 ORTHO05D004433 8.3e-24 115.2 250 34.0
Sopen02g010540 Solanum pennellii HOM05D008571 ORTHO05D011280 1.4e-23 114.4 159 42.8
PGSC0003DMG400021964 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.4e-23 114.4 168 41.1
ECA246G4710 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-23 113.2 259 32.8
PGSC0003DMG400024370 Solanum tuberosum HOM05D008571 ORTHO05D011280 4.1e-23 112.8 236 33.1
Nn3g20325 Nelumbo nucifera HOM05D008571 ORTHO05D004433 1.6e-22 110.9 148 44.6
SHI32312 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-22 109.4 238 33.6
ECA247G2369 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-22 109.0 285 31.2
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-21 108.2 101 56.4
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.0e-21 106.7 144 41.0
Sopen02g016810 Solanum pennellii HOM05D008571 ORTHO05D004433 6.6e-21 105.5 91 60.4
CSS0036927 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 4.3e-20 102.8 224 33.0
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 5.6e-20 102.4 95 49.5
ECA233G2319 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-19 101.3 236 32.6
Oeu034487.1 Olea europaea HOM05D000002 ORTHO05D004433 1.2e-19 101.3 107 47.7
PGSC0003DMG400001585 Solanum tuberosum HOM05D000002 ORTHO05D004433 2.1e-19 100.5 173 34.1
ECA240G3347 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-19 100.1 278 28.4
Thhalv10000559m.g Eutrema salsugineum HOM05D008571 ORTHO05D004433 8.1e-19 98.6 82 56.1
Thhalv10019725m.g Eutrema salsugineum HOM05D000002 ORTHO05D004433 1.4e-18 97.8 71 63.4
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-18 97.1 156 41.7
Sopen12g018110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-17 93.6 122 41.8
SHI03641 Sapria himalayana HOM05D000002 ORTHO05D004433 3.4e-17 93.2 164 37.2
ECA240G1708 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.4e-17 92.8 220 29.5
CSS0046925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 7.5e-17 92.0 258 32.6
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.5e-17 92.0 281 32.0
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 7.5e-17 92.0 85 54.1
Cc05_g05430 Coffea canephora HOM05D000002 ORTHO05D004433 1.7e-16 90.9 59 71.2
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-16 90.9 274 32.5
SHI37106 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-16 88.6 176 33.5
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 8.3e-16 88.6 67 64.2
Oeu003015.1 Olea europaea HOM05D000002 ORTHO05D004433 1.4e-15 87.8 88 51.1
RcHm_v2.0_Chr5g0017901 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-15 86.7 68 51.5
Sopen03g008290 Solanum pennellii HOM05D000002 ORTHO05D004433 3.2e-15 86.7 70 60.0
Sopen05g008270 Solanum pennellii HOM05D000006 ORTHO05D000695 1.2e-14 84.7 114 45.6
Sp1g30660 Schrenkiella parvula HOM05D008571 ORTHO05D004433 1.1e-12 78.2 117 44.4
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-12 75.9 115 44.3
SHI12755 Sapria himalayana HOM05D000002 ORTHO05D004433 9.5e-12 75.1 177 31.6
Nn2g15808 Nelumbo nucifera HOM05D000006 ORTHO05D004433 4.7e-11 72.8 58 60.3
Nn2g15606 Nelumbo nucifera HOM05D000006 ORTHO05D004433 6.2e-11 72.4 66 45.5
PGSC0003DMG400038206 Solanum tuberosum HOM05D008571 ORTHO05D011280 1.1e-10 71.6 79 50.6
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.8e-10 68.9 253 26.5
GSVIVG01017482001 Vitis vinifera HOM05D000002 ORTHO05D004433 1.5e-09 67.8 181 30.9
Ah.16g106890 Amaranthus hybridus HOM05D000002 ORTHO05D004433 2.0e-09 67.4 199 30.2
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.0e-09 67.4 151 31.8
BolC2t11645H Brassica oleracea HOM05D000002 ORTHO05D004433 2.6e-09 67.0 52 51.9
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 3.4e-09 66.6 69 50.7
Oeu030662.1 Olea europaea HOM05D000002 ORTHO05D004433 4.4e-09 66.2 142 35.9
COL.COLO4_30078 Corchorus olitorius HOM05D000002 ORTHO05D004433 5.8e-09 65.9 121 29.8
Sopen08g023440 Solanum pennellii HOM05D003027 ORTHO05D011280 5.8e-09 65.9 75 49.3
Nn5g27722 Nelumbo nucifera HOM05D000002 ORTHO05D004433 7.6e-09 65.5 58 55.2
SHI37107 Sapria himalayana HOM05D000002 ORTHO05D004433 7.6e-09 65.5 60 53.3
Sopen01g014490 Solanum pennellii HOM05D000004 ORTHO05D000002 7.6e-09 65.5 192 28.1
Sopen12g020480 Solanum pennellii HOM05D000002 ORTHO05D000001 2.9e-08 63.5 108 38.9
SHI26423 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 61.6 132 32.6
SHI28096 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-07 61.6 132 33.3
CAN.G492.33 Capsicum annuum HOM05D000002 ORTHO05D004433 2.4e-07 60.5 108 31.5
Ca_27471_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.4e-07 60.5 240 27.9
CSS0046023 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 3.2e-07 60.1 105 32.4
SHI10121 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-07 60.1 89 39.3
Manes.12G103911 Manihot esculenta HOM05D000006 ORTHO05D000001 4.1e-07 59.7 242 26.4
SHI05550 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-07 59.7 178 29.8
SHI07537 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-07 59.7 272 26.1
SEGI_02696 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 4.1e-07 59.7 105 33.3
SHI09918 Sapria himalayana HOM05D000002 ORTHO05D004433 5.4e-07 59.3 178 31.5
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 7.1e-07 58.9 104 32.7
Sopen06g028610 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-07 58.9 195 26.2
SHI46254 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-07 58.5 136 30.1
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.2e-06 58.2 107 30.8
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-06 58.2 263 22.8
SHI07420 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-06 58.2 65 44.6
SEGI_02620 Sequoiadendron giganteum HOM05D000591 ORTHO05D000579 1.2e-06 58.2 142 27.5
CSS0018245 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.8 54 50.0
Ca_04990_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.6e-06 57.8 138 34.1
MD04G1193900 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-06 57.8 212 25.0
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.6e-06 57.8 285 23.2
Oeu032225.1 Olea europaea HOM05D000002 ORTHO05D004433 1.6e-06 57.8 85 32.9
SHI07029 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 57.8 131 32.8
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.6e-06 57.8 243 23.9
Nn1g03239 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.1e-06 57.4 50 54.0
Ca_07385_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.7e-06 57.0 268 26.5
Ca_28459_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.7e-06 57.0 138 33.3
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 2.7e-06 57.0 61 49.2
Ca_27562_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.5e-06 56.6 255 27.8
SHI04169 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-06 56.6 104 34.6
Sopen08g023430 Solanum pennellii HOM05D008571 ORTHO05D011280 3.5e-06 56.6 178 30.9
PGSC0003DMG400010694 Solanum tuberosum HOM05D000002 ORTHO05D004433 4.6e-06 56.2 107 28.0
Ca_03879_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 6.0e-06 55.8 170 31.2
Sopen05g014170 Solanum pennellii HOM05D000004 ORTHO05D000002 6.0e-06 55.8 36 69.4
SHI02017 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-06 55.5 127 28.3
SHI12029 Sapria himalayana HOM05D000002 ORTHO05D004433 7.8e-06 55.5 166 28.9
SHI31522 Sapria himalayana HOM05D000002 ORTHO05D000001 7.8e-06 55.5 110 30.9


User provided reference genes

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