Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.9e-85 318.5 161 100.0
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.1e-84 316.6 161 98.8
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.4e-55 219.9 163 73.0
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.1e-47 193.7 163 64.4
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 6.9e-39 164.5 167 59.3
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.7e-37 159.8 164 54.3
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 4.9e-37 158.3 163 54.6
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 7.9e-35 151.0 166 54.8
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.3e-34 150.2 164 53.0
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 1.1e-33 147.1 168 49.4
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 1.1e-33 147.1 166 56.0
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 1.5e-33 146.7 172 54.1
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 5.7e-33 144.8 164 50.0
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 7.4e-33 144.4 169 54.4
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 1.3e-32 143.7 164 53.0
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.6e-32 143.3 173 50.3
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 1.6e-32 143.3 182 51.6
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 3.7e-32 142.1 173 49.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.7e-32 142.1 163 52.1
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 4.8e-32 141.7 170 51.2
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 6.3e-32 141.4 162 53.1
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 8.2e-32 141.0 170 50.6
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 8.2e-32 141.0 162 53.1
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 1.8e-31 139.8 172 50.0
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 6.9e-31 137.9 185 50.8
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 6.9e-31 137.9 160 50.0
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 9.0e-31 137.5 186 50.5
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 9.0e-31 137.5 157 49.7
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 1.2e-30 137.1 172 50.0
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.5e-30 136.7 185 50.3
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 2.6e-30 136.0 171 49.1
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.3e-29 133.7 159 51.6
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 1.7e-29 133.3 167 45.5
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.8e-29 132.1 157 46.5
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 6.5e-29 131.3 159 47.8
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.1e-28 130.6 165 52.7
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-28 130.6 153 51.0
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.1e-28 130.6 153 51.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 1.9e-28 129.8 158 46.8
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 2.5e-28 129.4 154 49.4
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 3.2e-28 129.0 153 50.3
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.5e-28 128.3 155 51.0
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.0e-26 124.0 180 47.8
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 3.0e-26 122.5 156 49.4
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 3.9e-26 122.1 173 43.9
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 8.8e-26 120.9 189 46.6
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.5e-25 120.2 182 42.3
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-25 120.2 155 48.4
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 4.3e-25 118.6 177 41.8
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 5.7e-25 118.2 164 50.0
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 5.7e-25 118.2 167 45.5
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 9.7e-25 117.5 166 47.6
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 2.2e-24 116.3 166 42.2
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 3.7e-24 115.5 164 48.2
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 1.8e-23 113.2 140 50.7
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 2.4e-23 112.8 163 44.8
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.1e-23 112.1 163 40.5
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 4.5e-22 108.6 168 42.9
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 8.5e-21 104.4 156 41.0
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.1e-20 104.0 159 42.1
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 1.1e-20 104.0 174 43.7
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 3.2e-20 102.4 173 42.8
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 5.5e-20 101.7 158 41.8
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 5.5e-20 101.7 157 39.5
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 5.5e-20 101.7 153 42.5
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 7.2e-20 101.3 158 41.8
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 9.4e-20 100.9 158 42.4
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.2e-19 100.5 153 45.8
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 1.2e-19 100.5 167 41.3
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.6e-19 100.1 155 41.3
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 4.7e-19 98.6 178 39.3
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 3.0e-18 95.9 158 39.9
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 5.1e-18 95.1 153 42.5
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 2.6e-17 92.8 156 39.7
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 4.4e-17 92.0 160 42.5
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 5.7e-17 91.7 139 43.9
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 1.7e-16 90.1 156 37.2
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 2.2e-16 89.7 158 38.0
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 3.7e-16 89.0 156 39.7
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 4.8e-16 88.6 147 39.5
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 4.8e-16 88.6 161 37.9
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 1.1e-15 87.4 160 34.4
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 9.1e-15 84.3 150 39.3
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 1.0e-13 80.9 175 38.9
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 1.7e-13 80.1 153 39.9
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 2.5e-12 76.3 153 35.3
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 4.2e-12 75.5 159 37.1
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 2.1e-11 73.2 135 41.5
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 3.6e-11 72.4 97 48.5
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 6.1e-11 71.6 103 43.7
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 8.0e-11 71.2 100 40.0
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 3.0e-10 69.3 182 32.4
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 1.1e-09 67.4 115 42.6
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 1.4e-07 60.5 156 35.3
TAR636G2156 Trochodendron aralioides HOM05D007580 ORTHO05D415623 2.4e-07 59.7 40 77.5
Os04g0521700 Oryza sativa ssp. japonica HOM05D007580 ORTHO05D009620 5.3e-07 58.5 160 34.4


User provided reference genes

Program Settings