Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn1868_0010 Schrenkiella parvula HOM05D000226 ORTHO05D029152 1.1e-44 183.0 98 100.0
Sp2g11680 Schrenkiella parvula HOM05D000226 ORTHO05D000142 4.3e-36 154.5 92 88.0
BcaB07g30812 Brassica carinata HOM05D000226 ORTHO05D000142 5.0e-32 141.0 96 77.1
BraA09t37869Z Brassica rapa HOM05D000226 ORTHO05D000142 8.5e-32 140.2 96 79.2
A09p22640 Brassica napus HOM05D000226 ORTHO05D000142 1.1e-31 139.8 96 79.2
BcaC04g21673 Brassica carinata HOM05D000226 ORTHO05D000142 1.4e-31 139.4 96 79.2
C09p29100 Brassica napus HOM05D000226 ORTHO05D000142 1.4e-31 139.4 96 79.2
BolC9t55769H Brassica oleracea HOM05D000226 ORTHO05D000142 1.4e-31 139.4 96 79.2
A06p45490 Brassica napus HOM05D000226 ORTHO05D000142 1.6e-30 136.0 94 78.7
BcaC06g34328 Brassica carinata HOM05D000226 ORTHO05D000142 1.4e-29 132.9 100 78.0
C07p30300 Brassica napus HOM05D000226 ORTHO05D000142 1.4e-29 132.9 100 78.0
BolC7t43572H Brassica oleracea HOM05D000226 ORTHO05D000142 1.4e-29 132.9 100 78.0
Thhalv10000776m.g Eutrema salsugineum HOM05D000226 ORTHO05D000142 1.5e-28 129.4 93 76.3
BraA06t27421Z Brassica rapa HOM05D000226 ORTHO05D000142 2.0e-28 129.0 94 76.6
AL8G11400 Arabidopsis lyrata HOM05D000226 ORTHO05D000142 1.3e-27 126.3 95 72.6
BcaC06g31435 Brassica carinata HOM05D000226 ORTHO05D000142 2.2e-27 125.6 98 74.5
CARHR174540 Cardamine hirsuta HOM05D000226 ORTHO05D000142 3.7e-27 124.8 98 72.4
AT5G46880 Arabidopsis thaliana HOM05D000226 ORTHO05D000142 1.4e-26 122.9 95 70.5
Carub.0008s0100 Capsella rubella HOM05D000226 ORTHO05D000142 9.1e-26 120.2 95 67.4
Aa31sc182G10 Aethionema arabicum HOM05D000226 ORTHO05D000142 3.8e-24 114.8 86 70.9
THA.LOC104798338 Tarenaya hassleriana HOM05D000226 ORTHO05D000142 1.1e-18 96.7 89 61.8
Sp7g16430 Schrenkiella parvula HOM05D000226 ORTHO05D000142 2.9e-16 88.6 83 56.6
Thhalv10026759m.g Eutrema salsugineum HOM05D000226 ORTHO05D000142 1.1e-15 86.7 90 62.2
AL7G36870 Arabidopsis lyrata HOM05D000226 ORTHO05D000142 1.5e-15 86.3 79 57.0
Potri.003G096000 Populus trichocarpa HOM05D000226 ORTHO05D000142 4.2e-15 84.7 85 56.5
AT4G17710 Arabidopsis thaliana HOM05D000226 ORTHO05D000142 9.4e-15 83.6 81 54.3
Sabra03G0064800 Salix brachista HOM05D000226 ORTHO05D000142 9.4e-15 83.6 90 53.3
Lj2A233T46 Lonicera japonica HOM05D000226 ORTHO05D000142 2.7e-14 82.0 77 54.5
A08p13310 Brassica napus HOM05D000226 ORTHO05D000142 3.6e-14 81.6 91 56.0
BraA08t33313Z Brassica rapa HOM05D000226 ORTHO05D000142 3.6e-14 81.6 91 56.0
Carub.0007s2367 Capsella rubella HOM05D000226 ORTHO05D000142 4.7e-14 81.3 82 53.7
Cpa.g.sc90.5 Carica papaya HOM05D000226 ORTHO05D000142 4.7e-14 81.3 96 47.9
TAR374G0535 Trochodendron aralioides HOM05D000226 ORTHO05D000142 4.7e-14 81.3 83 51.8
SGA_v2.0_scaffold198G41080 Striga asiatica HOM05D000226 ORTHO05D000142 8.0e-14 80.5 81 53.1
Migut.E00753 Erythranthe guttata HOM05D000226 ORTHO05D000142 1.0e-13 80.1 99 45.5
Ah.07g200850 Amaranthus hybridus HOM05D000226 ORTHO05D000142 1.8e-13 79.3 86 50.0
MSTRG.12170 Avicennia marina HOM05D000226 ORTHO05D000142 1.8e-13 79.3 95 50.5
Potri.001G137800 Populus trichocarpa HOM05D000226 ORTHO05D000142 2.3e-13 79.0 95 47.4
GSVIVG01013073001 Vitis vinifera HOM05D000226 ORTHO05D000142 2.3e-13 79.0 96 46.9
BcaC07g38096 Brassica carinata HOM05D000226 ORTHO05D000142 3.0e-13 78.6 91 54.9
DCAR_008230 Daucus carota HOM05D000226 ORTHO05D000142 3.0e-13 78.6 81 55.6
Sabra01G0106500 Salix brachista HOM05D000226 ORTHO05D000142 3.0e-13 78.6 95 45.3
FAN04G3190 Fragaria x ananassa HOM05D000226 ORTHO05D000142 4.0e-13 78.2 85 49.4
Sed0015704 Sechium edule HOM05D000226 ORTHO05D000142 4.0e-13 78.2 86 51.2
TAR375G0724 Trochodendron aralioides HOM05D000226 ORTHO05D000142 4.0e-13 78.2 92 47.8
Dinv28995 Davidia involucrata HOM05D000226 ORTHO05D000142 5.2e-13 77.8 92 47.8
FvH4_5g22940 Fragaria vesca HOM05D000226 ORTHO05D000142 6.8e-13 77.4 85 49.4
FAN13G3181 Fragaria x ananassa HOM05D000226 ORTHO05D000142 6.8e-13 77.4 85 49.4
FAN18G1839 Fragaria x ananassa HOM05D000226 ORTHO05D000142 6.8e-13 77.4 85 49.4
FAN18G2914 Fragaria x ananassa HOM05D000226 ORTHO05D000142 6.8e-13 77.4 85 49.4
ClCG09G011700 Citrullus lanatus HOM05D000226 ORTHO05D000142 8.8e-13 77.0 88 50.0
Nn3g19403 Nelumbo nucifera HOM05D000226 ORTHO05D000142 8.8e-13 77.0 93 46.2
PGR031G0092 Punica granatum HOM05D000226 ORTHO05D000142 8.8e-13 77.0 83 49.4
Atru.chr6.1513 Acer truncatum HOM05D000226 ORTHO05D000142 1.2e-12 76.6 94 46.8
AUR62007346 Chenopodium quinoa HOM05D000226 ORTHO05D000142 1.2e-12 76.6 97 46.4
Ciclev10003996m.g Citrus clementina HOM05D000226 ORTHO05D000142 1.2e-12 76.6 100 44.0
FAN08G3362 Fragaria x ananassa HOM05D000226 ORTHO05D000142 1.2e-12 76.6 88 48.9
Nn1g00190 Nelumbo nucifera HOM05D000226 ORTHO05D000142 1.2e-12 76.6 95 46.3
Oeu017066.1 Olea europaea HOM05D000226 ORTHO05D000142 1.2e-12 76.6 83 51.8
Hund11193 Selenicereus undatus HOM05D000226 ORTHO05D000142 1.2e-12 76.6 81 46.9
BcaB04g18441 Brassica carinata HOM05D000226 ORTHO05D000142 1.5e-12 76.3 91 51.6
BolC8t48515H Brassica oleracea HOM05D000226 ORTHO05D000142 1.5e-12 76.3 91 53.8
QL12p001354 Quercus lobata HOM05D000226 ORTHO05D000142 2.0e-12 75.9 97 44.3
CsaV3_3G048900 Cucumis sativus L. HOM05D000226 ORTHO05D000142 2.6e-12 75.5 86 51.2
Oeu028865.1 Olea europaea HOM05D000226 ORTHO05D000142 2.6e-12 75.5 88 50.0
Hma1.2p1_0572F.1_g181260 Hydrangea macrophylla HOM05D000226 ORTHO05D000142 3.4e-12 75.1 96 45.8
MD06G1025900 Malus domestica HOM05D000226 ORTHO05D000142 3.4e-12 75.1 98 48.0
TWI60G1449 Tripterygium wilfordii HOM05D000226 ORTHO05D000142 3.4e-12 75.1 95 47.4
Nitab4.5_0003055g0010 Nicotiana tabacum HOM05D000226 ORTHO05D000142 4.4e-12 74.7 103 45.6
Phvul.002G137000 Phaseolus vulgaris HOM05D000226 ORTHO05D000142 4.4e-12 74.7 82 52.4
Ah.12g055430 Amaranthus hybridus HOM05D000226 ORTHO05D000142 5.7e-12 74.3 78 47.4
MELO3C003433.2 Cucumis melo HOM05D000226 ORTHO05D000142 5.7e-12 74.3 86 47.7
Manes.17G017400 Manihot esculenta HOM05D000226 ORTHO05D000142 7.5e-12 73.9 92 45.7
Prupe.5G029000 Prunus persica HOM05D000226 ORTHO05D000142 7.5e-12 73.9 110 44.5
unitig_21.g20892 Utricularia gibba HOM05D000226 ORTHO05D000142 7.5e-12 73.9 82 48.8
Eucgr.D02223 Eucalyptus grandis HOM05D000226 ORTHO05D000142 9.8e-12 73.6 88 45.5
Nitab4.5_0000411g0020 Nicotiana tabacum HOM05D000226 ORTHO05D000142 9.8e-12 73.6 103 44.7
Peaxi162Scf00456g00213 Petunia axillaris HOM05D000226 ORTHO05D000142 9.8e-12 73.6 92 45.7
Zm00001eb024680 Zea mays HOM05D000226 ORTHO05D000142 9.8e-12 73.6 96 44.8
Dinv28993 Davidia involucrata HOM05D000226 ORTHO05D000142 1.7e-11 72.8 92 46.7
Hma1.2p1_0870F.1_g230850 Hydrangea macrophylla HOM05D000226 ORTHO05D000142 1.7e-11 72.8 87 49.4
SalBow1G1641 Salvia bowleyana HOM05D000226 ORTHO05D000142 1.7e-11 72.8 86 48.8
CiPaw.12G067600 Carya illinoinensis HOM05D000226 ORTHO05D000142 2.2e-11 72.4 98 46.9
Glyma.01G014600 Glycine max HOM05D000226 ORTHO05D000142 2.2e-11 72.4 87 50.6
EL10Ac5g12025 Beta vulgaris HOM05D000226 ORTHO05D000142 2.8e-11 72.0 84 47.6
BcaC07g38095 Brassica carinata HOM05D059682 ORTHO05D039589 2.8e-11 72.0 67 59.7
RcHm_v2.0_Chr7g0211691 Rosa chinensis HOM05D000226 ORTHO05D000142 2.8e-11 72.0 81 48.1
arahy.Tifrunner.gnm1.ann1.J7P0LQ Arachis hypogaea HOM05D000226 ORTHO05D000142 3.7e-11 71.6 88 46.6
arahy.Tifrunner.gnm1.ann1.UNKR58 Arachis hypogaea HOM05D000226 ORTHO05D000142 3.7e-11 71.6 88 46.6
PSO063G4151 Papaver somniferum HOM05D000226 ORTHO05D000142 3.7e-11 71.6 94 42.6
PSO782G4687 Papaver somniferum HOM05D000226 ORTHO05D000142 3.7e-11 71.6 94 42.6
Thecc.03G309000 Theobroma cacao HOM05D000226 ORTHO05D000142 3.7e-11 71.6 90 46.7
VMungo1215G2371 Vigna mungo HOM05D000226 ORTHO05D000142 3.7e-11 71.6 83 51.8
MSTRG.13740 Avicennia marina HOM05D000226 ORTHO05D000142 4.8e-11 71.2 85 48.2
Lj2g0016393 Lotus japonicus HOM05D000226 ORTHO05D000142 4.8e-11 71.2 79 50.6
Rhsim11G0020500 Rhododendron simsii HOM05D000226 ORTHO05D000142 4.8e-11 71.2 87 48.3
Os10g0575600 Oryza sativa ssp. japonica HOM05D000226 ORTHO05D000142 6.3e-11 70.9 109 39.4
CSS0027302 Camellia sinensis var. sinensis HOM05D000226 ORTHO05D000142 8.3e-11 70.5 85 48.2
CiPaw.11G097700 Carya illinoinensis HOM05D000226 ORTHO05D000142 8.3e-11 70.5 97 43.3
Gohir.D03G175700 Gossypium hirsutum HOM05D000226 ORTHO05D000142 8.3e-11 70.5 83 48.2
Gorai.003G184900 Gossypium raimondii HOM05D000226 ORTHO05D000142 8.3e-11 70.5 83 48.2
Haze_08123 Corylus avellana HOM05D000226 ORTHO05D029152 1.4e-10 69.7 104 40.4
Haze_08139 Corylus avellana HOM05D000226 ORTHO05D000142 1.4e-10 69.7 104 40.4
Duzib084G0282 Durio zibethinus HOM05D000226 ORTHO05D000142 1.4e-10 69.7 91 47.3
Gohir.D03G175800 Gossypium hirsutum HOM05D000226 ORTHO05D000142 1.4e-10 69.7 88 46.6
Gorai.003G185000 Gossypium raimondii HOM05D000226 ORTHO05D000142 1.4e-10 69.7 88 46.6
ATR0829G148 Amborella trichopoda HOM05D000226 ORTHO05D000142 2.4e-10 68.9 81 44.4
CDE02G0715 Ceratophyllum demersum HOM05D000226 ORTHO05D000142 2.4e-10 68.9 90 47.8
Glyma.09G207500 Glycine max HOM05D000226 ORTHO05D000142 3.1e-10 68.6 95 44.2
Gohir.A03G000036 Gossypium hirsutum HOM05D000226 ORTHO05D000142 3.1e-10 68.6 88 45.5
COL.COLO4_16955 Corchorus olitorius HOM05D000226 ORTHO05D000142 4.1e-10 68.2 84 50.0
Lalb_Chr16g0381131 Lupinus albus HOM05D000226 ORTHO05D000142 4.1e-10 68.2 89 44.9
Sc22g0001830 Simmondsia chinensis HOM05D000226 ORTHO05D000142 4.1e-10 68.2 96 45.8
PGSC0003DMG400002394 Solanum tuberosum HOM05D000226 ORTHO05D000142 4.1e-10 68.2 97 42.3
HanXRQChr06g0172641 Helianthus annuus HOM05D000226 ORTHO05D000142 5.4e-10 67.8 83 43.4
CAN.G726.9 Capsicum annuum HOM05D000226 ORTHO05D000142 7.0e-10 67.4 108 39.8
AUR62018653 Chenopodium quinoa HOM05D000226 ORTHO05D000142 9.1e-10 67.0 74 51.4
ECA246G4397 Erigeron canadensis HOM05D000226 ORTHO05D000142 9.1e-10 67.0 76 47.4
VMungo0720G2102 Vigna mungo HOM05D000226 ORTHO05D029152 9.1e-10 67.0 82 47.6
Duzib068G1266 Durio zibethinus HOM05D000226 ORTHO05D000142 1.2e-09 66.6 90 44.4
Gohir.A03G000037 Gossypium hirsutum HOM05D000226 ORTHO05D000142 1.2e-09 66.6 88 45.5
MD16G1280500 Malus domestica HOM05D000226 ORTHO05D000142 2.0e-09 65.9 83 49.4
Solyc08g076370.3 Solanum lycopersicum HOM05D000226 ORTHO05D000142 2.0e-09 65.9 108 38.9
vmacro00288 Vaccinium macrocarpon HOM05D000226 ORTHO05D000142 2.0e-09 65.9 97 42.3
Sopen08g024950 Solanum pennellii HOM05D000226 ORTHO05D000142 2.7e-09 65.5 108 38.9
CANSAT21G0970 Cannabis sativa HOM05D000226 ORTHO05D000142 3.5e-09 65.1 82 47.6
CANSAT21G2153 Cannabis sativa HOM05D000226 ORTHO05D000142 3.5e-09 65.1 82 47.6
Duzib205G0784 Durio zibethinus HOM05D000226 ORTHO05D000142 3.5e-09 65.1 90 42.2
Aqoxy3G02204 Aquilegia oxysepala HOM05D000226 ORTHO05D000142 4.5e-09 64.7 102 40.2
Cc08_g03370 Coffea canephora HOM05D000226 ORTHO05D000142 7.7e-09 63.9 99 40.4
HPP92_003318 Vanilla planifolia HOM05D000226 ORTHO05D000142 7.7e-09 63.9 91 40.7
Medtr5g029320 Medicago truncatula HOM05D000226 ORTHO05D000142 1.0e-08 63.5 97 42.3
TPR.G19441 Trifolium pratense HOM05D000226 ORTHO05D000142 1.0e-08 63.5 94 41.5
Lsat_1_v5_gn_3_19261 Lactuca sativa HOM05D000226 ORTHO05D000142 1.7e-08 62.8 88 42.0
ClCG04G012660 Citrullus lanatus HOM05D000226 ORTHO05D000142 5.0e-08 61.2 79 41.8
HanXRQChr17g0538111 Helianthus annuus HOM05D000226 ORTHO05D000142 5.0e-08 61.2 79 43.0
Psat2g138440 Pisum sativum HOM05D000226 ORTHO05D000142 5.0e-08 61.2 96 42.7
CARHR224430 Cardamine hirsuta HOM05D000226 ORTHO05D000142 6.5e-08 60.8 93 49.5
Duzib084G0044 Durio zibethinus HOM05D000226 ORTHO05D000142 6.5e-08 60.8 83 43.4
Thecc.10G147300 Theobroma cacao HOM05D000226 ORTHO05D000142 6.5e-08 60.8 82 42.7
Glyma.05G248800 Glycine max HOM05D000226 ORTHO05D000142 8.5e-08 60.5 83 43.4
CDE05G2492 Ceratophyllum demersum HOM05D000226 ORTHO05D000142 1.1e-07 60.1 78 41.0
Duzib068G0073 Durio zibethinus HOM05D000226 ORTHO05D000142 1.1e-07 60.1 86 40.7
Sed0013497 Sechium edule HOM05D000226 ORTHO05D000142 1.1e-07 60.1 79 41.8
Duzib205G1134 Durio zibethinus HOM05D000226 ORTHO05D000142 1.5e-07 59.7 82 40.2
Ca_25181_v3 Cicer arietinum L. HOM05D000226 ORTHO05D000142 1.9e-07 59.3 93 43.0
Potri.015G034100 Populus trichocarpa HOM05D000226 ORTHO05D000142 1.9e-07 59.3 82 39.0
TAR374G0218 Trochodendron aralioides HOM05D000226 ORTHO05D000142 1.9e-07 59.3 82 42.7
TAR374G0286 Trochodendron aralioides HOM05D000226 ORTHO05D000142 1.9e-07 59.3 82 42.7
Cfa020682 Carpinus fangiana HOM05D000226 ORTHO05D000142 2.5e-07 58.9 85 38.8
Sabra12G0026900 Salix brachista HOM05D000226 ORTHO05D000142 2.5e-07 58.9 82 40.2
TAR629G1986 Trochodendron aralioides HOM05D000226 ORTHO05D000142 2.5e-07 58.9 79 41.8
Thhalv10015677m.g Eutrema salsugineum HOM05D000226 ORTHO05D000142 3.2e-07 58.5 80 35.0
Glyma.08G057400 Glycine max HOM05D000226 ORTHO05D000142 4.2e-07 58.2 85 42.4
MBI19_g27699_MAGBIO Magnolia biondii HOM05D000226 ORTHO05D000142 4.2e-07 58.2 85 38.8
COL.COLO4_04639 Corchorus olitorius HOM05D000226 ORTHO05D000142 7.2e-07 57.4 82 37.8
CDE11G1093 Ceratophyllum demersum HOM05D000226 ORTHO05D000142 9.4e-07 57.0 78 41.0
Haze_18987 Corylus avellana HOM05D000226 ORTHO05D000142 9.4e-07 57.0 81 39.5
Potri.012G038500 Populus trichocarpa HOM05D000226 ORTHO05D000142 9.4e-07 57.0 82 39.0
Prupe.5G240900 Prunus persica HOM05D000226 ORTHO05D000142 9.4e-07 57.0 83 38.6
A10p09860 Brassica napus HOM05D000226 ORTHO05D000142 1.2e-06 56.6 81 35.8
BraA10t43067Z Brassica rapa HOM05D000226 ORTHO05D000142 1.2e-06 56.6 81 35.8
Lalb_Chr05g0221381 Lupinus albus HOM05D000226 ORTHO05D000142 1.2e-06 56.6 90 41.1
Aqoxy3G00008 Aquilegia oxysepala HOM05D000226 ORTHO05D000142 2.1e-06 55.8 80 41.2
Gorai.008G293300 Gossypium raimondii HOM05D000226 ORTHO05D000142 2.1e-06 55.8 81 38.3
MD14G1243300 Malus domestica HOM05D000226 ORTHO05D000142 2.1e-06 55.8 83 38.6
Sabra15G0028300 Salix brachista HOM05D000226 ORTHO05D000142 2.1e-06 55.8 82 37.8
Hund14367 Selenicereus undatus HOM05D000226 ORTHO05D000142 2.1e-06 55.8 75 41.3
QL10p032687 Quercus lobata HOM05D000226 ORTHO05D000142 2.7e-06 55.5 81 38.3
Atru.chr9.1572 Acer truncatum HOM05D000226 ORTHO05D000142 3.6e-06 55.1 87 37.9
CARHR265090 Cardamine hirsuta HOM05D000226 ORTHO05D000142 3.6e-06 55.1 76 36.8
Gohir.D12G272900 Gossypium hirsutum HOM05D000226 ORTHO05D000142 3.6e-06 55.1 85 37.6
Gohir.A12G272100 Gossypium hirsutum HOM05D000226 ORTHO05D000142 4.7e-06 54.7 81 37.0
Eucgr.H00609 Eucalyptus grandis HOM05D000226 ORTHO05D000142 6.1e-06 54.3 85 35.3
BcaC04g20606 Brassica carinata HOM05D000226 ORTHO05D000142 8.0e-06 53.9 81 35.8
C09p41590 Brassica napus HOM05D000226 ORTHO05D000142 8.0e-06 53.9 81 35.8
BolC9t57043H Brassica oleracea HOM05D000226 ORTHO05D000142 8.0e-06 53.9 81 35.8
Ciclev10019153m.g Citrus clementina HOM05D000226 ORTHO05D000142 8.0e-06 53.9 83 36.1
Oeu021664.1 Olea europaea HOM05D000226 ORTHO05D000142 8.0e-06 53.9 91 37.4
SHI07347 Sapria himalayana HOM05D000226 ORTHO05D000142 8.0e-06 53.9 91 35.2


User provided reference genes

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