Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn1429_0010 Schrenkiella parvula HOM05D001807 ORTHO05D002044 1.3e-46 189.5 107 100.0
BolC2t09125H Brassica oleracea HOM05D001807 ORTHO05D002044 1.4e-40 169.5 107 90.7
A02p18510 Brassica napus HOM05D001807 ORTHO05D002044 3.5e-39 164.9 109 85.3
BraA02t06890Z Brassica rapa HOM05D001807 ORTHO05D002044 3.5e-39 164.9 109 85.3
C02p30700 Brassica napus HOM05D001807 ORTHO05D002044 1.7e-38 162.5 107 87.9
Thhalv10018237m.g Eutrema salsugineum HOM05D001807 ORTHO05D002044 6.9e-35 150.6 107 82.2
AL2G32930 Arabidopsis lyrata HOM05D001807 ORTHO05D002044 2.0e-34 149.1 107 70.1
Carub.0002s1995 Capsella rubella HOM05D001807 ORTHO05D002044 8.4e-33 143.7 107 68.2
Aa31LG4G3450 Aethionema arabicum HOM05D001807 ORTHO05D002044 3.5e-31 138.3 114 64.0
CARHR066150 Cardamine hirsuta HOM05D001807 ORTHO05D002044 3.5e-31 138.3 109 66.1
AT1G73170 Arabidopsis thaliana HOM05D001807 ORTHO05D002044 4.3e-29 131.3 100 68.0
Gohir.D01G044800 Gossypium hirsutum HOM05D001807 ORTHO05D002044 3.4e-18 95.1 109 49.5
Gorai.002G064400 Gossypium raimondii HOM05D001807 ORTHO05D002044 9.9e-18 93.6 109 48.6
vmacro09504 Vaccinium macrocarpon HOM05D001807 ORTHO05D002044 9.9e-18 93.6 107 45.8
CAN.G1390.1 Capsicum annuum HOM05D001807 ORTHO05D002044 1.7e-17 92.8 107 46.7
Peaxi162Scf00000g00221 Petunia axillaris HOM05D001807 ORTHO05D002044 2.9e-17 92.0 107 46.7
DCAR_019588 Daucus carota HOM05D001807 ORTHO05D002044 1.1e-16 90.1 107 50.5
Nitab4.5_0000035g0010 Nicotiana tabacum HOM05D001807 ORTHO05D002044 1.4e-16 89.7 107 44.9
QL08p027181 Quercus lobata HOM05D001807 ORTHO05D002044 4.2e-16 88.2 106 45.3
CSS0041061 Camellia sinensis var. sinensis HOM05D001807 ORTHO05D002044 5.5e-16 87.8 107 44.9
ClCG11G017580 Citrullus lanatus HOM05D001807 ORTHO05D002044 7.1e-16 87.4 107 45.8
Oeu059275.3 Olea europaea HOM05D001807 ORTHO05D002044 9.3e-16 87.0 107 45.8
Actinidia18789 Actinidia chinensis HOM05D001807 ORTHO05D002044 1.2e-15 86.7 107 45.8
Sopen12g005940 Solanum pennellii HOM05D001807 ORTHO05D002044 1.6e-15 86.3 108 46.3
arahy.Tifrunner.gnm1.ann1.D34DFJ Arachis hypogaea HOM05D001807 ORTHO05D002044 2.7e-15 85.5 111 45.9
Potri.001G375900 Populus trichocarpa HOM05D001807 ORTHO05D002044 3.5e-15 85.1 107 46.7
MELO3C025630.2 Cucumis melo HOM05D001807 ORTHO05D002044 4.6e-15 84.7 107 45.8
CsaV3_4G033260 Cucumis sativus L. HOM05D001807 ORTHO05D002044 4.6e-15 84.7 107 45.8
Duzib170G0291 Durio zibethinus HOM05D001807 ORTHO05D002044 4.6e-15 84.7 109 45.0
FvH4_3g18730 Fragaria vesca HOM05D001807 ORTHO05D002044 4.6e-15 84.7 107 46.7
FAN11G4014 Fragaria x ananassa HOM05D001807 ORTHO05D002044 4.6e-15 84.7 107 46.7
arahy.Tifrunner.gnm1.ann1.ZP448L Arachis hypogaea HOM05D001807 ORTHO05D002044 7.9e-15 84.0 111 45.9
GSVIVG01014235001 Vitis vinifera HOM05D001807 ORTHO05D002044 7.9e-15 84.0 109 44.0
ECA236G0336 Erigeron canadensis HOM05D001807 ORTHO05D002044 1.0e-14 83.6 108 44.4
FAN21G0150 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.3e-14 83.2 107 45.8
CANSAT35G0436 Cannabis sativa HOM05D001807 ORTHO05D002044 2.3e-14 82.4 109 45.9
FAN16G2367 Fragaria x ananassa HOM05D001807 ORTHO05D002044 2.3e-14 82.4 107 44.9
Nn1g04340 Nelumbo nucifera HOM05D001807 ORTHO05D002044 2.3e-14 82.4 107 43.0
Psat4g137080 Pisum sativum HOM05D001807 ORTHO05D002044 3.0e-14 82.0 110 45.5
TAR626G0861 Trochodendron aralioides HOM05D001807 ORTHO05D002044 3.0e-14 82.0 109 45.9
Atru.chr2.2252 Acer truncatum HOM05D001807 ORTHO05D002044 3.9e-14 81.6 108 43.5
Haze_09357 Corylus avellana HOM05D001807 ORTHO05D002044 3.9e-14 81.6 107 42.1
Sed0013834 Sechium edule HOM05D001807 ORTHO05D002044 5.1e-14 81.3 107 44.9
CiPaw.11G163500 Carya illinoinensis HOM05D001807 ORTHO05D002044 6.7e-14 80.9 107 43.0
Lalb_Chr19g0133931 Lupinus albus HOM05D001807 ORTHO05D002044 8.7e-14 80.5 109 43.1
RcHm_v2.0_Chr5g0031521 Rosa chinensis HOM05D001807 ORTHO05D002044 1.1e-13 80.1 107 43.9
Sabra16G0247800 Salix brachista HOM05D001807 ORTHO05D002044 1.5e-13 79.7 107 44.9
Medtr8g463650 Medicago truncatula HOM05D001807 ORTHO05D002044 1.9e-13 79.3 110 46.4
Rhsim04G0024300 Rhododendron simsii HOM05D001807 ORTHO05D002044 1.9e-13 79.3 107 41.1
Cfa019601 Carpinus fangiana HOM05D001807 ORTHO05D002044 2.5e-13 79.0 107 41.1
MD11G1259100 Malus domestica HOM05D001807 ORTHO05D002044 2.5e-13 79.0 107 43.0
unitig_86.g29834 Utricularia gibba HOM05D001807 ORTHO05D002044 3.3e-13 78.6 113 41.6
COL.COLO4_17613 Corchorus olitorius HOM05D001807 ORTHO05D002044 4.3e-13 78.2 107 40.2
HanXRQChr15g0494221 Helianthus annuus HOM05D001807 ORTHO05D002044 4.3e-13 78.2 107 53.3
Lj3g0025658 Lotus japonicus HOM05D001807 ORTHO05D002044 5.6e-13 77.8 109 45.9
FAN25G3778 Fragaria x ananassa HOM05D001807 ORTHO05D002044 1.3e-12 76.6 105 43.8
EL10Ac4g08326 Beta vulgaris HOM05D001807 ORTHO05D002044 3.7e-12 75.1 111 40.5
Ca_26091_v3 Cicer arietinum L. HOM05D001807 ORTHO05D002044 3.7e-12 75.1 110 44.5
Eucgr.F03249 Eucalyptus grandis HOM05D001807 ORTHO05D002044 3.7e-12 75.1 109 43.1
AUR62037875 Chenopodium quinoa HOM05D001807 ORTHO05D002044 4.8e-12 74.7 110 41.8
AUR62019557 Chenopodium quinoa HOM05D001807 ORTHO05D002044 6.2e-12 74.3 110 40.9
Cc05_g11420 Coffea canephora HOM05D001807 ORTHO05D002044 6.2e-12 74.3 106 44.3
Lj8A151T53 Lonicera japonica HOM05D001807 ORTHO05D002044 6.2e-12 74.3 112 44.6
SalBow8G3795 Salvia bowleyana HOM05D001807 ORTHO05D002044 6.2e-12 74.3 112 44.6
Sc03g0010410 Simmondsia chinensis HOM05D001807 ORTHO05D002044 6.2e-12 74.3 107 42.1
Manes.15G091200 Manihot esculenta HOM05D001807 ORTHO05D002044 2.4e-11 72.4 107 40.2
Aqoxy4G00486 Aquilegia oxysepala HOM05D001807 ORTHO05D002044 4.0e-11 71.6 109 42.2
Migut.M00748 Erythranthe guttata HOM05D001807 ORTHO05D002044 6.9e-11 70.9 104 43.3
Lsat_1_v5_gn_7_103120 Lactuca sativa HOM05D001807 ORTHO05D002044 1.5e-10 69.7 121 49.6
PSO782G2512 Papaver somniferum HOM05D001807 ORTHO05D002044 2.0e-10 69.3 111 39.6
SGA_v2.0_scaffold73G24205 Striga asiatica HOM05D001807 ORTHO05D002044 2.6e-10 68.9 107 40.2
unitig_85.g27414 Utricularia gibba HOM05D001807 ORTHO05D002044 2.6e-10 68.9 64 53.1
MSTRG.6807 Avicennia marina HOM05D001807 ORTHO05D002044 3.4e-10 68.6 111 43.2
CDE09G0931 Ceratophyllum demersum HOM05D001807 ORTHO05D002044 3.4e-10 68.6 112 42.9
TPR.G6790 Trifolium pratense HOM05D001807 ORTHO05D002044 5.8e-10 67.8 109 42.2
Ciclev10010563m.g Citrus clementina HOM05D001807 ORTHO05D002044 7.6e-10 67.4 99 38.4
Cpa.g.sc131.68 Carica papaya HOM05D001807 ORTHO05D002044 1.3e-09 66.6 62 54.8
Phvul.011G160500 Phaseolus vulgaris HOM05D001807 ORTHO05D002044 1.9e-08 62.8 107 42.1
SEGI_17700 Sequoiadendron giganteum HOM05D001807 ORTHO05D002044 1.9e-08 62.8 106 36.8
AagrBONN_evm.TU.Sc2ySwM_228.5732 Anthoceros agrestis HOM05D001807 ORTHO05D002044 3.2e-08 62.0 107 39.3
Zm00001eb271060 Zea mays HOM05D001807 ORTHO05D002044 5.5e-08 61.2 107 37.4
TWI39G1304 Tripterygium wilfordii HOM05D001807 ORTHO05D002044 7.1e-08 60.8 113 36.3
MBI07_g17043_MAGBIO Magnolia biondii HOM05D001807 ORTHO05D002044 1.6e-07 59.7 107 38.3
Ah.04g164320 Amaranthus hybridus HOM05D001807 ORTHO05D002044 3.5e-07 58.5 69 49.3
Thecc.07G104000 Theobroma cacao HOM05D001807 ORTHO05D002044 3.5e-07 58.5 56 50.0
MD03G1239400 Malus domestica HOM05D001807 ORTHO05D002044 6.0e-07 57.8 43 62.8
Os06g0155600 Oryza sativa ssp. japonica HOM05D001807 ORTHO05D002044 1.3e-06 56.6 112 37.5
Pp3c14_10860 Physcomitrium patens HOM05D001807 ORTHO05D002044 1.3e-06 56.6 117 40.2
Mapoly0010s0157 Marchantia polymorpha HOM05D001807 ORTHO05D002044 1.8e-06 56.2 56 53.6
Sabra10G0177300 Salix brachista HOM05D001807 ORTHO05D002044 2.3e-06 55.8 107 38.3
VMungo0720G1646 Vigna mungo HOM05D001807 ORTHO05D002044 3.9e-06 55.1 107 35.5
ATR0665G476 Amborella trichopoda HOM05D001807 ORTHO05D002044 5.1e-06 54.7 106 37.7
Ca_11193_v3 Cicer arietinum L. HOM05D001807 ORTHO05D002044 5.1e-06 54.7 107 34.6
Phvul.007G025200 Phaseolus vulgaris HOM05D001807 ORTHO05D002044 5.1e-06 54.7 107 36.4
HPP92_021760 Vanilla planifolia HOM05D001807 ORTHO05D002044 6.7e-06 54.3 107 36.4
Cc02_g10800 Coffea canephora HOM05D001807 ORTHO05D002044 8.7e-06 53.9 56 53.6
SGA_v2.0_scaffold2G01349 Striga asiatica HOM05D002736 ORTHO05D003882 8.7e-06 53.9 61 50.8


User provided reference genes

Program Settings