Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn1191_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.2e-105 385.6 188 100.0
Sp5g18780 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.9e-81 305.4 178 79.8
SpUn0003_0120 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.7e-65 253.1 148 80.4
SpUn1299_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.4e-59 232.6 177 61.6
SpUn0486_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 3.1e-59 232.3 177 61.6
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 6.8e-54 214.5 177 57.1
C08p54100 Brassica napus HOM05D008883 ORTHO05D011075 6.8e-54 214.5 177 57.1
BolC8t52918H Brassica oleracea HOM05D008883 ORTHO05D011075 6.8e-54 214.5 177 57.1
BcaB08g35019 Brassica carinata HOM05D008883 ORTHO05D011075 7.5e-53 211.1 177 54.8
Sp5g18640 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.2e-47 193.7 159 62.3
BcaC04g20436 Brassica carinata HOM05D008883 ORTHO05D011075 3.5e-42 175.6 174 47.7
BcaB06g27532 Brassica carinata HOM05D008883 ORTHO05D011075 1.1e-40 170.6 153 51.6
A09p69320 Brassica napus HOM05D008883 ORTHO05D011075 3.1e-38 162.5 176 46.0
BolC8t52922H Brassica oleracea HOM05D008883 ORTHO05D011075 3.1e-38 162.5 176 46.0
BcaC04g20434 Brassica carinata HOM05D008883 ORTHO05D011075 3.4e-37 159.1 176 45.5
A09p69290 Brassica napus HOM05D008883 ORTHO05D011075 1.6e-34 150.2 174 43.1
BolC8t52919H Brassica oleracea HOM05D008883 ORTHO05D011075 1.6e-34 150.2 174 43.1
CARHR158160 Cardamine hirsuta HOM05D008883 ORTHO05D011075 4.3e-32 142.1 158 44.3
Sp3g24800 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.1e-31 139.8 159 46.5
C08p54140 Brassica napus HOM05D008883 ORTHO05D011075 8.9e-30 134.4 146 46.6
CARHR108020 Cardamine hirsuta HOM05D008883 ORTHO05D011075 8.9e-30 134.4 139 44.6
SpUn0002_0140 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.2e-29 134.0 102 59.8
Sp7g07010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 5.8e-29 131.7 175 43.4
SpUn0011_0050 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.2e-28 129.8 139 48.2
SpUn0052_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.2e-28 129.8 139 48.2
SpUn0057_0050 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.2e-28 129.8 139 48.2
Sp1g33150 Schrenkiella parvula HOM05D008883 ORTHO05D011075 4.1e-27 125.6 135 48.9
Sp7g05080 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.2e-26 124.0 147 43.5
Sp6g12610 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.0e-25 120.9 151 45.0
SpUn0015_0030 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.0e-25 120.9 151 45.0
SpUn0039_0060 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.0e-25 120.9 151 45.0
A09p69280 Brassica napus HOM05D008883 ORTHO05D011075 5.2e-22 108.6 93 54.8
Sp7g05660 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.6e-21 106.3 149 42.3
SpUn0001_0500 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.6e-21 106.3 120 47.5
BcaC05g29663 Brassica carinata HOM05D008883 ORTHO05D011075 9.9e-21 104.4 163 36.2
BcaB08g35020 Brassica carinata HOM05D008883 ORTHO05D011075 3.5e-18 95.9 109 45.9
BcaC05g29664 Brassica carinata HOM05D008883 ORTHO05D011075 2.3e-17 93.2 87 48.3
BcaC04g20437 Brassica carinata HOM05D008883 ORTHO05D011075 3.1e-14 82.8 73 50.7
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 9.9e-13 77.8 138 31.9
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-12 77.4 159 24.5
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-12 76.3 159 24.5
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 3.8e-12 75.9 159 24.5
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 3.8e-12 75.9 159 24.5
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-12 75.5 159 25.2
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.1e-11 74.3 138 31.2
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 1.4e-11 73.9 157 24.8
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-11 73.9 157 24.8
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.2e-11 72.8 160 24.4
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.2e-11 72.8 160 24.4
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 4.2e-11 72.4 159 23.9
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 4.2e-11 72.4 159 25.8
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 4.2e-11 72.4 159 24.5
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 5.4e-11 72.0 160 25.0
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 7.1e-11 71.6 161 26.1
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 9.3e-11 71.2 126 31.0
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 9.3e-11 71.2 126 31.0
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 9.3e-11 71.2 145 26.9
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-10 70.9 159 23.9
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-10 70.5 174 24.1
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-10 70.1 159 25.8
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-10 69.7 161 24.8
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 4.6e-10 68.9 148 25.7
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 4.6e-10 68.9 130 34.6
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 1.0e-09 67.8 105 31.4
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 1.0e-09 67.8 105 31.4
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 1.3e-09 67.4 138 27.5
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 1.3e-09 67.4 136 27.9
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 1.8e-09 67.0 105 31.4
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-09 66.6 160 23.1
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 3.0e-09 66.2 105 31.4
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-09 65.9 158 24.1
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-09 65.9 138 25.4
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 6.7e-09 65.1 142 27.5
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 8.7e-09 64.7 158 24.1
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 1.5e-08 63.9 143 30.1
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-08 63.9 158 23.4
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 1.5e-08 63.9 142 26.8
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 1.5e-08 63.9 134 27.6
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-08 63.5 164 25.0
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-08 63.5 135 27.4
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 2.5e-08 63.2 158 24.1
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-08 63.2 149 26.8
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-08 63.2 177 22.6
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 2.5e-08 63.2 149 26.8
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 3.3e-08 62.8 165 21.8
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 3.3e-08 62.8 149 26.8
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-08 62.8 177 22.6
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 3.3e-08 62.8 165 27.9
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 3.3e-08 62.8 165 27.9
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 4.3e-08 62.4 130 29.2
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 4.3e-08 62.4 134 26.9
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 5.6e-08 62.0 143 29.4
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 5.6e-08 62.0 149 26.8
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 9.6e-08 61.2 127 23.6
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.3e-07 60.8 161 20.5
AT1G74875 Arabidopsis thaliana HOM05D002915 ORTHO05D003004 1.6e-07 60.5 133 27.8
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.6e-07 60.5 149 23.5
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.6e-07 60.5 134 25.4
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 2.1e-07 60.1 168 27.4
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-07 59.7 163 25.8
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 3.7e-07 59.3 115 27.8
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-07 59.3 172 22.1
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 3.7e-07 59.3 119 26.9
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 3.7e-07 59.3 139 25.2
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 4.8e-07 58.9 167 23.4
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 4.8e-07 58.9 135 23.7
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 4.8e-07 58.9 136 30.1
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 4.8e-07 58.9 136 29.4
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 4.8e-07 58.9 115 32.2
Psat0s3757g0040 Pisum sativum HOM05D002915 ORTHO05D003004 1.1e-06 57.8 118 30.5
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.1e-06 57.8 190 21.6
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 1.4e-06 57.4 123 30.9
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.8e-06 57.0 140 25.7
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 2.4e-06 56.6 144 26.4
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 2.4e-06 56.6 144 26.4
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-06 56.6 134 23.9
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 3.1e-06 56.2 136 28.7
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 3.1e-06 56.2 159 23.3
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 3.1e-06 56.2 74 36.5
BcaC09g47930 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-06 55.8 124 27.4
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 4.0e-06 55.8 192 22.4
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 5.3e-06 55.5 83 34.9
BcaB03g15181 Brassica carinata HOM05D002915 ORTHO05D003004 6.9e-06 55.1 61 39.3
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 6.9e-06 55.1 143 25.2
BcaC08g46172 Brassica carinata HOM05D002915 ORTHO05D003004 9.0e-06 54.7 61 39.3
C06p42620 Brassica napus HOM05D002915 ORTHO05D003004 9.0e-06 54.7 61 39.3
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 9.0e-06 54.7 104 28.8
BolC6t39177H Brassica oleracea HOM05D002915 ORTHO05D003004 9.0e-06 54.7 61 39.3
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 9.0e-06 54.7 90 37.8
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 9.0e-06 54.7 154 24.0
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 9.0e-06 54.7 137 24.8


User provided reference genes

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