Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.9e-83 312.4 153 100.0
SpUn0135_0020 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.0e-71 273.5 153 88.9
Sp7g08580 Schrenkiella parvula HOM05D017451 ORTHO05D019359 7.7e-64 247.3 137 88.3
SpUn0458_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 2.0e-51 206.1 153 73.2
SpUn1143_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 5.5e-46 188.0 148 71.6
SpUn0001_0520 Schrenkiella parvula HOM05D017451 ORTHO05D019359 8.6e-39 164.1 101 77.2
SpUn0008_0040 Schrenkiella parvula HOM05D000471 ORTHO05D011337 4.1e-17 92.0 59 83.1
Sp7g07640 Schrenkiella parvula HOM05D017451 ORTHO05D019359 8.6e-15 84.3 67 64.2
Sp4g07060 Schrenkiella parvula HOM05D000471 ORTHO05D000199 1.1e-14 84.0 62 69.4
CARHR284490 Cardamine hirsuta HOM05D000589 ORTHO05D001885 4.3e-14 82.0 129 39.5
BcaC02g11017 Brassica carinata HOM05D000589 ORTHO05D001885 8.9e-12 74.3 122 36.1
BolC4t23737H Brassica oleracea HOM05D000589 ORTHO05D001885 8.9e-12 74.3 122 36.1
BcaC09g48351 Brassica carinata HOM05D000209 ORTHO05D001885 2.0e-11 73.2 160 30.0
BraA06t25708Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-11 73.2 127 33.9
BolC8t49853H Brassica oleracea HOM05D000589 ORTHO05D001885 2.6e-11 72.8 142 34.5
Carub.0011s0002 Capsella rubella HOM05D000589 ORTHO05D001885 4.4e-11 72.0 128 32.0
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 7.6e-11 71.2 110 33.6
BcaC02g12212 Brassica carinata HOM05D000589 ORTHO05D001885 7.6e-11 71.2 113 34.5
A09p69380 Brassica napus HOM05D000696 ORTHO05D001068 9.9e-11 70.9 122 35.2
BolC8t52930H Brassica oleracea HOM05D000696 ORTHO05D001068 9.9e-11 70.9 122 35.2
CARHR059960 Cardamine hirsuta HOM05D000589 ORTHO05D001885 9.9e-11 70.9 97 40.2
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-10 70.5 118 33.9
Carub.0004s0674 Capsella rubella HOM05D025401 ORTHO05D026774 1.3e-10 70.5 92 42.4
BcaC05g28515 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-10 70.1 169 30.8
BcaC07g42449 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-10 69.7 162 27.8
AL2G19110 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 2.9e-10 69.3 132 37.9
BcaB03g12711 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-10 69.3 167 28.7
BcaC04g21855 Brassica carinata HOM05D000589 ORTHO05D001885 3.8e-10 68.9 127 33.9
BolC8t49094H Brassica oleracea HOM05D000589 ORTHO05D000401 3.8e-10 68.9 159 28.3
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-10 68.6 101 32.7
BcaC05g25277 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-10 68.6 169 28.4
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 4.9e-10 68.6 179 30.2
Carub.0007s3075 Capsella rubella HOM05D000589 ORTHO05D001885 4.9e-10 68.6 72 47.2
BcaC04g23550 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-10 68.2 125 32.0
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 6.4e-10 68.2 182 29.7
BcaB07g32763 Brassica carinata HOM05D000589 ORTHO05D001885 8.4e-10 67.8 108 38.9
BolC2t11199H Brassica oleracea HOM05D000589 ORTHO05D001885 8.4e-10 67.8 169 28.4
BolC9t59088H Brassica oleracea HOM05D000589 ORTHO05D001885 8.4e-10 67.8 127 33.9
Carub.0001s4113 Capsella rubella HOM05D000589 ORTHO05D001885 8.4e-10 67.8 110 37.3
Carub.0003s0398 Capsella rubella HOM05D000589 ORTHO05D001885 8.4e-10 67.8 110 37.3
Carub.0004s0663 Capsella rubella HOM05D000589 ORTHO05D001885 8.4e-10 67.8 111 32.4
BolC7t46298H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-09 67.4 112 33.0
BolC3t21112H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-09 67.0 152 28.9
BolC5t30704H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-09 67.0 102 33.3
BcaC07g39835 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-09 66.6 128 29.7
BcaC04g20325 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-09 66.2 163 30.1
BolC7t44689H Brassica oleracea HOM05D000589 ORTHO05D001885 2.4e-09 66.2 142 33.1
BolC9t53328H Brassica oleracea HOM05D000589 ORTHO05D001885 3.2e-09 65.9 155 32.3
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 3.2e-09 65.9 108 36.1
BraA09t39932Z Brassica rapa HOM05D000589 ORTHO05D001885 3.2e-09 65.9 122 34.4
BcaC08g43983 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-09 65.5 72 38.9
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 4.1e-09 65.5 93 32.3
BolC2t12526H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-09 65.5 133 33.8
BolC6t36567H Brassica oleracea HOM05D000589 ORTHO05D001885 4.1e-09 65.5 72 38.9
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 5.4e-09 65.1 128 30.5
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-09 65.1 147 29.9
BolC6t36507H Brassica oleracea HOM05D000589 ORTHO05D001885 5.4e-09 65.1 80 37.5
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 7.1e-09 64.7 128 29.7
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 7.1e-09 64.7 128 29.7
BcaC08g45938 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-09 64.7 71 42.3
BolC9t59154H Brassica oleracea HOM05D000214 ORTHO05D000131 7.1e-09 64.7 164 28.7
Sp3g26370 Schrenkiella parvula HOM05D017451 ORTHO05D019359 7.1e-09 64.7 41 85.4
BcaC05g24704 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-09 64.3 158 29.7
BcaB03g15647 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-08 63.9 86 36.0
BcaB04g19137 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-08 63.9 166 31.3
BolC7t43381H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-08 63.9 112 34.8
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-08 63.9 101 30.7
BolC8t49444H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-08 63.9 117 29.9
BolC9t58427H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-08 63.9 72 38.9
Carub.0005s0910 Capsella rubella HOM05D000589 ORTHO05D001885 1.2e-08 63.9 141 31.9
BcaC03g17183 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-08 63.5 59 47.5
BcaC05g29515 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-08 63.5 155 30.3
BolC4t24673H Brassica oleracea HOM05D000589 ORTHO05D001885 1.6e-08 63.5 84 39.3
Carub.0003s1040 Capsella rubella HOM05D000589 ORTHO05D001885 2.1e-08 63.2 120 30.8
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 3.5e-08 62.4 101 29.7
BraA09t40543Z Brassica rapa HOM05D000589 ORTHO05D001885 3.5e-08 62.4 171 29.8
AL1G16160 Arabidopsis lyrata HOM05D000589 ORTHO05D001885 4.6e-08 62.0 123 33.3
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 4.6e-08 62.0 53 45.3
Carub.0099s0002 Capsella rubella HOM05D000589 ORTHO05D000395 4.6e-08 62.0 101 40.6
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 6.0e-08 61.6 53 47.2
BolC5t33392H Brassica oleracea HOM05D000589 ORTHO05D001885 6.0e-08 61.6 160 31.9
BcaC05g25220 Brassica carinata HOM05D000589 ORTHO05D001885 1.0e-07 60.8 93 37.6
C07p49130 Brassica napus HOM05D000589 ORTHO05D001885 1.0e-07 60.8 161 29.8
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 1.0e-07 60.8 114 31.6
BolC6t37831H Brassica oleracea HOM05D000589 ORTHO05D001885 1.0e-07 60.8 48 50.0
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.5 127 28.3
BcaC04g23115 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-07 60.5 110 35.5
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-07 60.1 113 31.0
BcaC08g45440 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-07 60.1 125 32.8
BcaC08g45778 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-07 60.1 141 34.8
Carub.0001s3710 Capsella rubella HOM05D000589 ORTHO05D001885 1.7e-07 60.1 78 38.5
BolC3t14145H Brassica oleracea HOM05D000589 ORTHO05D001885 2.3e-07 59.7 97 36.1
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 2.3e-07 59.7 175 27.4
BraA02t07685Z Brassica rapa HOM05D000589 ORTHO05D001885 2.3e-07 59.7 120 32.5
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 3.0e-07 59.3 176 30.7
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-07 58.9 176 30.1
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-07 58.9 100 32.0
BolC1t00773H Brassica oleracea HOM05D000589 ORTHO05D001885 3.9e-07 58.9 125 32.8
BolC6t38683H Brassica oleracea HOM05D000589 ORTHO05D000401 3.9e-07 58.9 127 33.1
Carub.0008s2840 Capsella rubella HOM05D000589 ORTHO05D001885 3.9e-07 58.9 123 30.9
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.9e-07 58.9 127 31.5
BolC2t08273H Brassica oleracea HOM05D000589 ORTHO05D000401 5.1e-07 58.5 116 34.5
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 6.6e-07 58.2 107 30.8
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-07 58.2 121 28.1
BolC3t12574H Brassica oleracea HOM05D000589 ORTHO05D001885 6.6e-07 58.2 120 33.3
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 8.6e-07 57.8 119 31.9
BcaB08g35560 Brassica carinata HOM05D000589 ORTHO05D001885 8.6e-07 57.8 138 29.0
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 8.6e-07 57.8 127 28.3
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 1.1e-06 57.4 113 34.5
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 1.1e-06 57.4 138 27.5
BcaC01g05715 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-06 57.0 127 32.3
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 1.5e-06 57.0 101 27.7
Carub.0007s3086 Capsella rubella HOM05D000589 ORTHO05D001885 1.5e-06 57.0 119 31.9
BcaB02g11384 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-06 56.6 169 29.6
BolC3t19856H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-06 56.6 120 32.5
BcaB03g14716 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 56.2 169 29.6
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-06 56.2 176 30.1
BolC3t16945H Brassica oleracea HOM05D000589 ORTHO05D001885 2.5e-06 56.2 127 29.9
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 2.5e-06 56.2 111 27.9
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.3e-06 55.8 86 34.9
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 3.3e-06 55.8 72 37.5
THA.LOC104818502 Tarenaya hassleriana HOM05D007693 ORTHO05D002086 3.3e-06 55.8 74 39.2
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.3e-06 55.5 140 25.7
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 4.3e-06 55.5 140 25.7
Carub.0006s2645 Capsella rubella HOM05D000589 ORTHO05D001885 4.3e-06 55.5 111 29.7
BcaC04g19067 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 55.1 166 25.9
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 55.1 176 29.5
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 5.6e-06 55.1 101 31.7
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 5.6e-06 55.1 127 30.7
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 5.6e-06 55.1 104 32.7
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 5.6e-06 55.1 127 30.7
Carub.0002s1040 Capsella rubella HOM05D000589 ORTHO05D001885 5.6e-06 55.1 104 36.5
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 9.6e-06 54.3 110 33.6
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 9.6e-06 54.3 98 31.6
BolC3t17893H Brassica oleracea HOM05D000589 ORTHO05D000401 9.6e-06 54.3 166 27.7
BolC7t41896H Brassica oleracea HOM05D000589 ORTHO05D001885 9.6e-06 54.3 116 33.6
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 9.6e-06 54.3 86 32.6
Carub.0006s2597 Capsella rubella HOM05D025401 ORTHO05D026774 9.6e-06 54.3 57 40.4


User provided reference genes

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