Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0995_0010 Schrenkiella parvula HOM05D000053 ORTHO05D000035 2.4e-37 158.3 78 100.0
Sp4g02250 Schrenkiella parvula HOM05D000077 ORTHO05D000035 3.3e-18 94.7 49 93.9
SpUn1186_0010 Schrenkiella parvula HOM05D000053 ORTHO05D000035 4.7e-17 90.9 49 89.8
AT3G11010 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 3.7e-14 81.3 50 76.0
AT5G27060 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.1e-13 79.7 50 76.0
AT3G28890 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.4e-13 79.3 50 76.0
Thhalv10000044m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 1.8e-13 79.0 48 81.2
Thhalv10002367m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 4.1e-13 77.8 48 79.2
Thhalv10000034m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 5.4e-13 77.4 48 79.2
Thhalv10000035m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 5.4e-13 77.4 48 79.2
Thhalv10000552m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 5.4e-13 77.4 48 79.2
AT3G11080 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 7.0e-13 77.0 49 75.5
AL3G22620 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 9.2e-13 76.6 49 73.5
CARHR105520 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.0e-12 75.5 49 71.4
BolC4t26821H Brassica oleracea HOM05D000053 ORTHO05D000035 2.7e-12 75.1 51 74.5
Carub.0003s0498 Capsella rubella HOM05D000053 ORTHO05D000035 3.5e-12 74.7 48 77.1
BolC1t05336H Brassica oleracea HOM05D000053 ORTHO05D000035 4.6e-12 74.3 49 71.4
CARHR085660 Cardamine hirsuta HOM05D000053 ORTHO05D000035 4.6e-12 74.3 50 70.0
AT2G15042 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 5.9e-12 73.9 50 68.0
CARHR105480 Cardamine hirsuta HOM05D000053 ORTHO05D000035 5.9e-12 73.9 48 68.8
Carub.0003s2900 Capsella rubella HOM05D000053 ORTHO05D000035 7.8e-12 73.6 49 65.3
Thhalv10002360m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 1.0e-11 73.2 48 75.0
CARHR105510 Cardamine hirsuta HOM05D000053 ORTHO05D000035 1.3e-11 72.8 47 72.3
BcaC01g03463 Brassica carinata HOM05D000053 ORTHO05D000035 2.3e-11 72.0 59 61.0
Thhalv10000632m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 6.6e-11 70.5 52 73.1
AT1G47890 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.1e-10 69.7 52 61.5
BraA10t44651Z Brassica rapa HOM05D000053 ORTHO05D000035 1.1e-10 69.7 47 70.2
AT3G05650 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.5e-10 69.3 47 74.5
Carub.0003s1030 Capsella rubella HOM05D000053 ORTHO05D000035 2.5e-10 68.6 50 70.0
A03p45380 Brassica napus HOM05D000053 ORTHO05D000035 3.3e-10 68.2 46 69.6
BraA03t13670Z Brassica rapa HOM05D000053 ORTHO05D000035 3.3e-10 68.2 46 69.6
BcaC01g03567 Brassica carinata HOM05D000053 ORTHO05D000035 4.3e-10 67.8 49 67.3
BolC3t17393H Brassica oleracea HOM05D000053 ORTHO05D000035 4.3e-10 67.8 49 67.3
C09p64950 Brassica napus HOM05D000053 ORTHO05D000035 9.5e-10 66.6 47 66.0
CARHR080100 Cardamine hirsuta HOM05D000053 ORTHO05D000035 9.5e-10 66.6 52 63.5
BcaB04g21147 Brassica carinata HOM05D000053 ORTHO05D000035 1.2e-09 66.2 48 68.8
A10p25880 Brassica napus HOM05D000053 ORTHO05D000035 1.6e-09 65.9 51 66.7
Sp7g03130 Schrenkiella parvula HOM05D000053 ORTHO05D000035 1.6e-09 65.9 51 68.6
A04p20070 Brassica napus HOM05D000053 ORTHO05D000035 2.1e-09 65.5 46 69.6
BraA04t17589Z Brassica rapa HOM05D000053 ORTHO05D000035 2.1e-09 65.5 46 69.6
Carub.0001s3699 Capsella rubella HOM05D000053 ORTHO05D000035 2.1e-09 65.5 45 64.4
BolC9t59325H Brassica oleracea HOM05D000053 ORTHO05D000035 4.7e-09 64.3 47 63.8
Carub.0001s3657 Capsella rubella HOM05D000053 ORTHO05D000035 4.7e-09 64.3 46 60.9
Carub.0001s3297 Capsella rubella HOM05D000053 ORTHO05D000035 6.2e-09 63.9 46 65.2
BcaC04g22948 Brassica carinata HOM05D000053 ORTHO05D000035 8.0e-09 63.5 46 60.9
C03p44670 Brassica napus HOM05D000053 ORTHO05D000035 8.0e-09 63.5 43 69.8
BolC3t16729H Brassica oleracea HOM05D000053 ORTHO05D000035 8.0e-09 63.5 43 69.8
BolC9t54248H Brassica oleracea HOM05D000053 ORTHO05D000035 8.0e-09 63.5 46 60.9
Carub.0003s2899 Capsella rubella HOM05D000053 ORTHO05D000035 8.0e-09 63.5 45 64.4
A03p27770 Brassica napus HOM05D000053 ORTHO05D000035 1.4e-08 62.8 49 67.3
BraA03t11988Z Brassica rapa HOM05D000053 ORTHO05D000035 1.4e-08 62.8 49 67.3
AT5G25910 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.8e-08 62.4 50 62.0
BraA03t12311Z Brassica rapa HOM05D000053 ORTHO05D000035 1.8e-08 62.4 47 57.4
Carub.0001s3654 Capsella rubella HOM05D000053 ORTHO05D000035 2.3e-08 62.0 48 56.2
Thhalv10003118m.g Eutrema salsugineum HOM05D012374 ORTHO05D008836 2.3e-08 62.0 49 61.2
C03p33490 Brassica napus HOM05D000053 ORTHO05D000035 4.0e-08 61.2 46 69.6
Carub.0001s3650 Capsella rubella HOM05D000053 ORTHO05D000035 4.0e-08 61.2 45 60.0
AT2G15080 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 5.2e-08 60.8 53 56.6
THA.LOC104818704 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 5.2e-08 60.8 46 58.7
C04p55750 Brassica napus HOM05D000053 ORTHO05D000035 6.8e-08 60.5 46 67.4
BolC4t27101H Brassica oleracea HOM05D000053 ORTHO05D000035 6.8e-08 60.5 46 67.4
C08p34480 Brassica napus HOM05D000053 ORTHO05D000035 8.9e-08 60.1 48 54.2
AL1G54340 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 1.2e-07 59.7 46 60.9
A03p42630 Brassica napus HOM05D000315 ORTHO05D000035 1.2e-07 59.7 51 58.8
BcaB04g18720 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-07 59.3 37 73.0
BcaB04g21157 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-07 59.3 40 70.0
BcaB06g27884 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-07 59.3 36 75.0
Carub.0001s3648 Capsella rubella HOM05D000053 ORTHO05D000035 1.5e-07 59.3 45 57.8
CARHR105540 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.0e-07 58.9 51 52.9
Thhalv10026954m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 2.6e-07 58.5 45 60.0
AT1G45616 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 5.8e-07 57.4 46 52.2
BcaNung05943 Brassica carinata HOM05D000053 ORTHO05D000035 5.8e-07 57.4 44 56.8
BolC8t51049H Brassica oleracea HOM05D000053 ORTHO05D000035 5.8e-07 57.4 44 56.8
BraA07t28125Z Brassica rapa HOM05D000053 ORTHO05D000035 5.8e-07 57.4 38 71.1
BcaB04g21153 Brassica carinata HOM05D000053 ORTHO05D000035 7.5e-07 57.0 38 68.4
Carub.0003s2902 Capsella rubella HOM05D000053 ORTHO05D000035 7.5e-07 57.0 45 57.8
Carub.0007s2863 Capsella rubella HOM05D000053 ORTHO05D000035 9.8e-07 56.6 43 58.1
AL3G16300 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 1.3e-06 56.2 34 82.4
A09p51750 Brassica napus HOM05D000053 ORTHO05D000035 1.3e-06 56.2 49 53.1
BraA09t40611Z Brassica rapa HOM05D000053 ORTHO05D000035 1.3e-06 56.2 49 53.1
C04p62160 Brassica napus HOM05D000053 ORTHO05D000035 1.7e-06 55.8 48 50.0
C06p45490 Brassica napus HOM05D000053 ORTHO05D000035 1.7e-06 55.8 47 57.4
BraA01t04201Z Brassica rapa HOM05D000053 ORTHO05D000035 1.7e-06 55.8 59 55.9
Thhalv10020067m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 1.7e-06 55.8 47 55.3
A07p03250 Brassica napus HOM05D000053 ORTHO05D000035 2.2e-06 55.5 38 68.4
Carub.0002s1825 Capsella rubella HOM05D000053 ORTHO05D000035 2.2e-06 55.5 56 44.6
BcaC07g40476 Brassica carinata HOM05D000053 ORTHO05D000035 2.9e-06 55.1 37 62.2
BolC3t15671H Brassica oleracea HOM05D000053 ORTHO05D000035 2.9e-06 55.1 42 69.0
AT1G71390 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 4.9e-06 54.3 47 48.9
BcaB01g02901 Brassica carinata HOM05D000053 ORTHO05D000035 4.9e-06 54.3 34 79.4
BcaC01g04817 Brassica carinata HOM05D000053 ORTHO05D000035 4.9e-06 54.3 34 79.4
Sp4g14990 Schrenkiella parvula HOM05D000053 ORTHO05D000035 4.9e-06 54.3 53 50.9
AT2G32660 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 6.4e-06 53.9 48 52.1
BcaB04g18620 Brassica carinata HOM05D000053 ORTHO05D000035 6.4e-06 53.9 41 68.3
BolC2t08952H Brassica oleracea HOM05D000053 ORTHO05D000035 6.4e-06 53.9 46 52.2
Carub.0015s0020 Capsella rubella HOM05D000053 ORTHO05D000035 6.4e-06 53.9 49 53.1
Thhalv10028121m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 6.4e-06 53.9 38 68.4
Carub.0003s1037 Capsella rubella HOM05D000053 ORTHO05D000035 8.3e-06 53.5 63 47.6


User provided reference genes

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