Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0636_0010 Schrenkiella parvula HOM05D000196 ORTHO05D011356 2.2e-88 328.9 170 100.0
SpUn0315_0010 Schrenkiella parvula HOM05D000196 ORTHO05D011356 1.8e-61 239.6 155 81.9
Thhalv10016040m.g Eutrema salsugineum HOM05D000196 ORTHO05D011356 5.7e-60 234.6 154 81.2
C09p69330 Brassica napus HOM05D000196 ORTHO05D011356 9.2e-58 227.3 153 77.8
BolC9t59677H Brassica oleracea HOM05D000196 ORTHO05D011356 9.2e-58 227.3 153 77.8
BcaC06g32462 Brassica carinata HOM05D000196 ORTHO05D011356 2.7e-57 225.7 153 77.8
AT5G07210 Arabidopsis thaliana HOM05D000196 ORTHO05D011356 1.2e-54 216.9 153 75.2
A10p28970 Brassica napus HOM05D000196 ORTHO05D011356 2.8e-54 215.7 153 74.5
BcaB05g21628 Brassica carinata HOM05D000196 ORTHO05D011356 4.7e-54 214.9 154 73.4
BraA10t44945Z Brassica rapa HOM05D000196 ORTHO05D011356 1.4e-53 213.4 153 73.9
BcaB01g06030 Brassica carinata HOM05D000196 ORTHO05D011356 3.4e-52 208.8 159 70.4
BcaB01g06350 Brassica carinata HOM05D000196 ORTHO05D011356 1.6e-49 199.9 153 71.9
A03p03150 Brassica napus HOM05D000196 ORTHO05D011356 2.7e-49 199.1 153 71.2
BraA03t09671Z Brassica rapa HOM05D000196 ORTHO05D011356 2.7e-49 199.1 153 71.2
BolC3t12897H Brassica oleracea HOM05D000196 ORTHO05D011356 5.9e-49 198.0 153 70.6
CARHR205930 Cardamine hirsuta HOM05D000196 ORTHO05D011356 2.3e-48 196.1 154 70.8
AL6G17430 Arabidopsis lyrata HOM05D000196 ORTHO05D011356 1.1e-47 193.7 136 76.5
AT2G27070 Arabidopsis thaliana HOM05D000196 ORTHO05D011356 9.5e-47 190.7 153 69.9
Carub.0007s2971 Capsella rubella HOM05D000196 ORTHO05D011356 1.6e-46 189.9 153 68.0
C03p03570 Brassica napus HOM05D000196 ORTHO05D011356 8.0e-46 187.6 153 68.6
Carub.0006s0614 Capsella rubella HOM05D000196 ORTHO05D011356 3.1e-45 185.7 153 66.0
BraA02t04909Z Brassica rapa HOM05D000196 ORTHO05D011356 2.2e-43 179.5 153 65.4
C02p03030 Brassica napus HOM05D000196 ORTHO05D011356 6.0e-41 171.4 153 62.1
SpUn1082_0010 Schrenkiella parvula HOM05D000196 ORTHO05D011356 2.3e-40 169.5 116 79.3
BcaC03g13182 Brassica carinata HOM05D000196 ORTHO05D011356 3.3e-39 165.6 153 62.7
BolC2t06264H Brassica oleracea HOM05D000196 ORTHO05D011356 3.3e-39 165.6 153 62.7
Carub.0007s2972 Capsella rubella HOM05D000196 ORTHO05D011356 2.3e-32 142.9 153 55.6
AL5G25030 Arabidopsis lyrata HOM05D000503 ORTHO05D011356 6.2e-22 108.2 103 63.1
THA.LOC104818272 Tarenaya hassleriana HOM05D000196 ORTHO05D011356 3.9e-08 62.4 181 32.0
Thecc.03G170200 Theobroma cacao HOM05D000196 ORTHO05D000279 3.9e-08 62.4 156 33.3
Nitab4.5_0004560g0010 Nicotiana tabacum HOM05D000196 ORTHO05D000279 4.3e-07 58.9 160 30.6
Duzib084G0854 Durio zibethinus HOM05D000196 ORTHO05D000279 9.6e-07 57.8 155 31.6
Cpa.g.sc107.3 Carica papaya HOM05D000196 ORTHO05D000279 3.7e-06 55.8 159 31.4


User provided reference genes

Program Settings