Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 1.4e-27 125.6 63 100.0
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 3.0e-22 107.8 63 85.7
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 3.0e-22 107.8 63 85.7
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 1.5e-21 105.5 63 82.5
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 1.5e-21 105.5 63 82.5
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 2.5e-21 104.8 58 87.9
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 4.3e-21 104.0 61 85.2
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 7.4e-21 103.2 61 82.0
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 1.6e-20 102.1 63 84.1
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 1.6e-20 102.1 63 84.1
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 1.6e-20 102.1 63 84.1
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 1.6e-20 102.1 63 84.1
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 1.6e-20 102.1 63 84.1
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 3.1e-19 97.8 61 82.0
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 1.2e-18 95.9 63 74.6
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 1.5e-18 95.5 63 79.4
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 2.0e-18 95.1 56 85.7
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 5.5e-16 87.0 57 73.7
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 9.3e-16 86.3 61 72.1
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 9.3e-16 86.3 57 71.9
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 6.1e-15 83.6 61 65.6
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 7.9e-15 83.2 65 69.2
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 7.9e-15 83.2 57 71.9
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 7.9e-15 83.2 51 80.4
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.8e-14 82.0 61 68.9
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 1.8e-14 82.0 61 68.9
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 3.0e-14 81.3 61 68.9
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 3.0e-14 81.3 66 65.2
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 3.0e-14 81.3 64 71.9
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 3.0e-14 81.3 64 71.9
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 3.9e-14 80.9 65 67.7
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 3.9e-14 80.9 64 67.2
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 8.7e-14 79.7 63 71.4
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 8.7e-14 79.7 65 69.2
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 1.5e-13 79.0 57 68.4
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 1.5e-13 79.0 63 63.5
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 1.5e-13 79.0 62 64.5
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 1.5e-13 79.0 62 64.5
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 1.9e-13 78.6 61 65.6
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 1.9e-13 78.6 49 77.6
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 2.5e-13 78.2 58 70.7
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 3.3e-13 77.8 62 64.5
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 5.7e-13 77.0 64 64.1
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 7.4e-13 76.6 45 77.8
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 1.3e-12 75.9 58 69.0
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 1.3e-12 75.9 45 77.8
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 1.3e-12 75.9 62 62.9
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 1.6e-12 75.5 59 66.1
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 1.6e-12 75.5 58 67.2
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 2.2e-12 75.1 61 67.2
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 2.2e-12 75.1 63 61.9
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 2.8e-12 74.7 58 65.5
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 2.8e-12 74.7 58 67.2
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 3.7e-12 74.3 61 60.7
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 3.7e-12 74.3 60 65.0
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 3.7e-12 74.3 56 66.1
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 4.8e-12 73.9 58 65.5
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 4.8e-12 73.9 58 69.0
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 4.8e-12 73.9 48 64.6
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 6.3e-12 73.6 47 68.1
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 8.2e-12 73.2 57 64.9
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 1.1e-11 72.8 42 81.0
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 1.1e-11 72.8 58 67.2
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 1.1e-11 72.8 49 73.5
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 1.4e-11 72.4 49 71.4
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 1.8e-11 72.0 48 75.0
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 1.8e-11 72.0 46 78.3
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 3.1e-11 71.2 56 64.3
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 5.3e-11 70.5 46 69.6
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 6.9e-11 70.1 49 69.4
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 6.9e-11 70.1 49 73.5
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 6.9e-11 70.1 43 79.1
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 6.9e-11 70.1 45 77.8
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 3.4e-10 67.8 68 60.3
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 3.4e-10 67.8 57 63.2
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 3.4e-10 67.8 43 76.7
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 1.0e-09 66.2 63 57.1
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 1.0e-09 66.2 63 55.6
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 5.0e-09 63.9 43 69.8
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 6.5e-09 63.5 37 81.1
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 8.5e-09 63.2 43 69.8
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.4e-08 62.4 43 67.4
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 1.4e-08 62.4 40 70.0
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 5.5e-08 60.5 56 53.6


User provided reference genes

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