Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 7.1e-124 447.2 213 100.0
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 7.1e-124 447.2 213 100.0
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 1.8e-119 432.6 213 95.3
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.5e-118 429.5 213 94.4
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 1.5e-118 429.5 213 95.3
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 3.7e-117 424.9 213 93.9
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 2.4e-116 422.2 211 93.4
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 7.8e-115 417.2 213 93.4
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 2.3e-114 415.6 213 93.4
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 7.3e-113 410.6 215 92.6
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 1.6e-112 409.5 226 88.5
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 2.1e-112 409.1 220 90.5
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 3.6e-112 408.3 221 90.0
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 9.9e-110 400.2 215 87.0
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 9.9e-110 400.2 215 87.0
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.3e-109 399.8 211 86.3
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 2.2e-109 399.1 211 89.6
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.9e-108 396.0 213 86.4
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 5.4e-108 394.4 213 85.9
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.6e-107 392.9 213 85.4
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 4.0e-103 378.3 210 81.4
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 4.4e-102 374.8 211 81.5
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 7.6e-102 374.0 211 81.5
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 9.9e-102 373.6 210 81.9
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 3.8e-101 371.7 210 81.9
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 1.1e-100 370.2 210 81.4
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.1e-100 370.2 211 81.5
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 1.4e-100 369.8 210 82.4
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 1.4e-100 369.8 210 81.0
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.4e-100 369.8 210 81.0
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 1.9e-100 369.4 211 80.6
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 2.4e-100 369.0 210 82.4
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 4.2e-100 368.2 210 79.5
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 4.2e-100 368.2 209 80.9
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 4.2e-100 368.2 211 80.6
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 9.3e-100 367.1 210 81.9
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 1.2e-99 366.7 211 80.6
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 1.2e-99 366.7 210 80.5
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.2e-99 366.7 210 81.0
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 2.1e-99 365.9 211 80.1
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 2.1e-99 365.9 211 78.7
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 4.6e-99 364.8 211 80.1
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 4.6e-99 364.8 211 80.1
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 7.9e-99 364.0 210 79.5
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 7.9e-99 364.0 210 81.0
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 1.0e-98 363.6 211 76.3
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.0e-98 363.6 210 78.1
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.7e-98 362.8 210 80.5
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 2.3e-98 362.5 217 79.7
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.3e-98 362.5 210 81.0
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 2.3e-98 362.5 210 81.0
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 3.0e-98 362.1 211 76.3
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 3.9e-98 361.7 210 80.0
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 3.9e-98 361.7 211 79.6
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 3.9e-98 361.7 210 79.0
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 3.9e-98 361.7 211 76.3
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 5.1e-98 361.3 211 78.7
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 8.7e-98 360.5 210 79.5
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 1.9e-97 359.4 210 79.0
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.9e-97 359.4 211 75.8
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 2.5e-97 359.0 210 80.0
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 2.5e-97 359.0 216 76.9
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 5.6e-97 357.8 210 77.6
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 5.6e-97 357.8 210 80.5
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 7.3e-97 357.5 210 78.1
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 7.3e-97 357.5 215 79.5
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 7.3e-97 357.5 210 78.6
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 9.6e-97 357.1 215 79.5
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 1.6e-96 356.3 232 73.3
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 1.6e-96 356.3 237 72.6
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 2.1e-96 355.9 211 79.1
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 2.1e-96 355.9 206 78.6
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.8e-96 355.5 210 76.7
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 2.8e-96 355.5 211 79.1
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 4.8e-96 354.8 211 75.4
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.1e-96 354.0 211 76.3
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 8.1e-96 354.0 211 76.3
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 8.1e-96 354.0 204 81.4
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 1.4e-95 353.2 210 78.1
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 1.8e-95 352.8 210 78.6
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 2.4e-95 352.4 211 77.7
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 2.4e-95 352.4 211 77.7
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 5.3e-95 351.3 211 77.7
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 9.0e-95 350.5 206 79.1
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 9.0e-95 350.5 211 75.8
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 2.0e-94 349.4 206 79.1
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 2.6e-94 349.0 210 79.5
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 4.5e-94 348.2 213 74.2
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 9.9e-94 347.1 245 69.4
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 1.3e-93 346.7 197 81.2
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 5.4e-92 341.3 210 77.1
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 2.7e-91 339.0 206 77.2
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 7.9e-91 337.4 224 77.2
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 1.3e-90 336.7 198 80.3
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 6.7e-90 334.3 192 79.7
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 8.7e-90 334.0 212 74.1
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.9e-89 332.8 248 66.1
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 2.5e-89 332.4 191 81.7
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 4.3e-89 331.6 191 80.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 5.6e-89 331.3 211 71.6
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 2.8e-88 328.9 202 76.7
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 4.8e-88 328.2 229 69.9
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 8.1e-88 327.4 210 72.4
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 8.1e-88 327.4 191 78.5
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 3.1e-87 325.5 210 71.0
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 3.4e-86 322.0 191 78.0
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 2.9e-85 318.9 211 70.6
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 6.5e-85 317.8 211 70.6
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 4.2e-84 315.1 207 70.0
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 3.5e-83 312.0 207 71.0
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 3.0e-82 308.9 214 70.6
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 1.5e-81 306.6 213 70.0
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 7.4e-81 304.3 189 75.7
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 7.4e-81 304.3 189 75.7
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 3.7e-80 302.0 212 68.9
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 9.3e-76 287.3 152 87.5
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.7e-75 285.8 216 66.7
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.3e-74 282.7 153 85.0
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 3.9e-74 282.0 213 62.9
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 7.4e-73 277.7 214 58.4
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 1.5e-65 253.4 215 55.8
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 5.7e-65 251.5 213 58.7
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.3e-61 240.4 156 76.3
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 1.6e-59 233.4 151 70.9
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.0e-58 230.7 212 50.9
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 7.4e-57 224.6 207 55.1
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.1e-55 220.7 131 77.9
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 5.2e-42 175.3 179 49.7
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 9.1e-39 164.5 122 62.3
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.9e-36 156.8 181 48.1
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.8e-34 150.2 222 42.3
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 2.0e-33 146.7 144 48.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 4.4e-33 145.6 212 39.2
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.4e-07 60.8 35 74.3


User provided reference genes

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