Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0447_0010 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.1e-87 326.6 162 100.0
BolC6t36018H Brassica oleracea HOM05D000023 ORTHO05D000014 2.6e-25 119.4 99 54.5
BraA02t08161Z Brassica rapa HOM05D000023 ORTHO05D000014 1.7e-24 116.7 102 52.0
C04p23460 Brassica napus HOM05D000023 ORTHO05D000014 2.2e-24 116.3 97 54.6
C01p48630 Brassica napus HOM05D000023 ORTHO05D000014 6.3e-24 114.8 107 51.4
BraA08t32468Z Brassica rapa HOM05D000023 ORTHO05D000014 6.3e-24 114.8 101 52.5
Sp3g28010 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.4e-23 113.6 78 74.4
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 1.8e-23 113.2 107 50.5
BolC1t04816H Brassica oleracea HOM05D000023 ORTHO05D000014 1.8e-23 113.2 107 50.5
BolC4t23848H Brassica oleracea HOM05D000023 ORTHO05D000014 1.8e-23 113.2 97 53.6
BcaC03g13508 Brassica carinata HOM05D000023 ORTHO05D000014 1.6e-22 110.2 90 54.4
AUR62032027 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.2e-20 101.3 111 44.1
Thhalv10029312m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 9.4e-20 100.9 97 49.5
ECA233G2702 Erigeron canadensis HOM05D001282 ORTHO05D001236 3.6e-19 99.0 93 48.4
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 2.3e-18 96.3 104 43.3
ECA234G2464 Erigeron canadensis HOM05D000014 ORTHO05D000093 3.4e-17 92.4 108 40.7
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 4.1e-15 85.5 86 46.5
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 1.2e-14 84.0 64 54.7
FvH4_5g08812 Fragaria vesca HOM05D000023 ORTHO05D000014 1.2e-14 84.0 86 45.3
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.6e-14 83.6 76 47.4
Atru.chr6.596 Acer truncatum HOM05D000023 ORTHO05D000014 2.0e-14 83.2 104 39.4
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 2.7e-14 82.8 120 36.7
SHI50964 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-13 79.0 99 44.4
SHI27557 Sapria himalayana HOM05D000023 ORTHO05D000014 5.0e-13 78.6 99 45.5
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.2e-12 75.5 95 43.2
RcHm_v2.0_Chr6g0294991 Rosa chinensis HOM05D000023 ORTHO05D000014 9.5e-12 74.3 93 40.9
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-11 73.6 85 43.5
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 1.6e-11 73.6 85 43.5
TWI77G0100 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.1e-11 73.2 95 42.1
TWI39G1161 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.7e-11 72.8 95 42.1
Dinv09736 Davidia involucrata HOM05D000023 ORTHO05D017897 4.7e-11 72.0 87 42.5
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.7e-11 72.0 95 41.1
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 6.1e-11 71.6 117 35.0
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 6.1e-11 71.6 90 41.1
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 1.0e-10 70.9 84 42.9
QL07p028333 Quercus lobata HOM05D000023 ORTHO05D000014 1.0e-10 70.9 127 35.4
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 1.8e-10 70.1 90 40.0
PSO675G8761 Papaver somniferum HOM05D000023 ORTHO05D000014 3.0e-10 69.3 116 37.1
QL04p040428 Quercus lobata HOM05D001491 ORTHO05D000014 3.0e-10 69.3 108 35.2
PSO017G7398 Papaver somniferum HOM05D000023 ORTHO05D000014 4.0e-10 68.9 116 36.2
QL02p012945 Quercus lobata HOM05D000023 ORTHO05D000014 4.0e-10 68.9 127 33.9
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 4.0e-10 68.9 90 40.0
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 4.0e-10 68.9 112 35.7
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 4.0e-10 68.9 90 40.0
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 4.0e-10 68.9 89 43.8
SHI08605 Sapria himalayana HOM05D000105 ORTHO05D000014 5.2e-10 68.6 97 42.3
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 6.8e-10 68.2 127 33.1
QL01p016263 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-09 67.4 98 38.8
Hund07498 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-09 67.4 106 34.0
QL04p036651 Quercus lobata HOM05D000023 ORTHO05D000014 1.5e-09 67.0 107 37.4
Atru.chr1.2499 Acer truncatum HOM05D000023 ORTHO05D000014 2.6e-09 66.2 98 35.7
arahy.Tifrunner.gnm1.ann1.Q120Q3 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.4e-09 65.9 90 36.7
AUR62011831 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.4e-09 65.9 89 38.2
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 3.4e-09 65.9 101 35.6
vmacro19048 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 3.4e-09 65.9 77 41.6
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-09 65.1 87 36.8
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-09 65.1 87 36.8
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 99 35.4
AUR62010569 Chenopodium quinoa HOM05D001983 ORTHO05D001935 5.7e-09 65.1 75 41.3
AUR62012446 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 99 35.4
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 99 35.4
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62042701 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 89 38.2
AUR62044629 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 75 41.3
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-09 65.1 75 41.3
FvH4_5g23531 Fragaria vesca HOM05D000023 ORTHO05D000014 5.7e-09 65.1 94 36.2
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 5.7e-09 65.1 94 43.6
PSO478G2971 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-09 65.1 85 44.7
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 103 35.9
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 103 35.9
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 75 40.0
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 75 40.0
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 75 40.0
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.5e-09 64.7 103 35.9
SHI12542 Sapria himalayana HOM05D000023 ORTHO05D000014 7.5e-09 64.7 76 46.1
AUR62022925 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.8e-09 64.3 86 37.2
PSO384G2567 Papaver somniferum HOM05D000023 ORTHO05D000014 1.3e-08 63.9 77 41.6
FvH4_5g06632 Fragaria vesca HOM05D000023 ORTHO05D000014 1.7e-08 63.5 115 37.4
TWI73G0533 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.7e-08 63.5 111 36.0
PSO063G2055 Papaver somniferum HOM05D000023 ORTHO05D000014 2.2e-08 63.2 71 43.7
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 2.8e-08 62.8 71 43.7
SHI32734 Sapria himalayana HOM05D000023 ORTHO05D000014 2.8e-08 62.8 81 44.4
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 3.7e-08 62.4 88 37.5
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 4.9e-08 62.0 92 39.1
AUR62000817 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.9e-08 62.0 89 38.2
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 4.9e-08 62.0 87 40.2
RcHm_v2.0_Chr6g0262081 Rosa chinensis HOM05D000023 ORTHO05D000014 6.3e-08 61.6 76 42.1
BolC7t46348H Brassica oleracea HOM05D016075 ORTHO05D000014 1.1e-07 60.8 87 39.1
PSO357G0123 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-07 60.5 87 42.5
Zm00001eb410340 Zea mays HOM05D000023 ORTHO05D000014 1.4e-07 60.5 94 36.2
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.8e-07 60.1 88 36.4
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-07 60.1 58 48.3
Lj6g0018275 Lotus japonicus HOM05D000023 ORTHO05D000014 2.4e-07 59.7 82 37.8
SpUn0001_0940 Schrenkiella parvula HOM05D000023 ORTHO05D000014 2.4e-07 59.7 69 44.9
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 2.4e-07 59.7 78 42.3
PSO339G2310 Papaver somniferum HOM05D000023 ORTHO05D000014 3.1e-07 59.3 87 42.5
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 7.0e-07 58.2 113 31.0
EL10Ac1g02127 Beta vulgaris HOM05D000023 ORTHO05D000014 9.2e-07 57.8 86 36.0
EL10Ac6g14082 Beta vulgaris HOM05D000023 ORTHO05D000014 1.2e-06 57.4 101 33.7
Lj6g0019681 Lotus japonicus HOM05D000023 ORTHO05D000014 1.6e-06 57.0 98 36.7
Oeu039770.2 Olea europaea HOM05D000023 ORTHO05D000014 2.0e-06 56.6 117 29.9
Lj2g0000793 Lotus japonicus HOM05D000023 ORTHO05D000014 2.7e-06 56.2 82 40.2
FvH4_2g26163 Fragaria vesca HOM05D000023 ORTHO05D000014 4.5e-06 55.5 70 38.6
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 4.5e-06 55.5 98 36.7
Sp7g14400 Schrenkiella parvula HOM05D000023 ORTHO05D000014 5.9e-06 55.1 37 78.4
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 7.7e-06 54.7 77 33.8
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 7.7e-06 54.7 74 40.5
Solyc03g078070.3 Solanum lycopersicum HOM05D000023 ORTHO05D000014 7.7e-06 54.7 76 35.5


User provided reference genes

Program Settings