Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0438_0010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 1.6e-189 666.0 362 100.0
SpUn0194_0010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 1.5e-126 456.8 354 70.6
Aa31LG7G14910 Aethionema arabicum HOM05D011111 ORTHO05D001112 1.1e-49 201.4 237 44.7
Thhalv10003118m.g Eutrema salsugineum HOM05D012374 ORTHO05D008836 2.0e-46 190.7 227 48.0
BolC1t03761H Brassica oleracea HOM05D006180 ORTHO05D008836 2.0e-41 174.1 223 43.9
BolC8t47705H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-39 168.3 312 34.9
BolC3t19745H Brassica oleracea HOM05D012374 ORTHO05D008836 5.0e-37 159.5 186 45.2
BcaC01g01706 Brassica carinata HOM05D011111 ORTHO05D001112 1.5e-36 157.9 250 38.0
BcaC03g14054 Brassica carinata HOM05D011111 ORTHO05D001112 1.6e-35 154.5 248 39.1
BcaC02g11176 Brassica carinata HOM05D011111 ORTHO05D001112 3.6e-35 153.3 248 38.7
Sp1g32770 Schrenkiella parvula HOM05D012374 ORTHO05D017111 8.0e-35 152.1 275 41.8
Aa31LG9G11080 Aethionema arabicum HOM05D011111 ORTHO05D001112 1.2e-33 148.3 193 42.0
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 1.1e-28 131.7 136 44.1
BolC2t09131H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-28 131.7 153 44.4
BolC4t24699H Brassica oleracea HOM05D006180 ORTHO05D008836 1.1e-28 131.7 318 30.2
Sp5g17320 Schrenkiella parvula HOM05D012374 ORTHO05D017111 2.0e-25 120.9 68 88.2
AL1G18540 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 5.7e-25 119.4 247 31.6
AL7G51780 Arabidopsis lyrata HOM05D013448 ORTHO05D001112 4.8e-24 116.3 254 29.1
BolC9t56767H Brassica oleracea HOM05D006180 ORTHO05D008836 8.3e-24 115.5 186 39.2
Sp7g04080 Schrenkiella parvula HOM05D012374 ORTHO05D017111 1.1e-23 115.2 140 60.7
Sp4g07010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 8.6e-21 105.5 75 76.0
A08p28740 Brassica napus HOM05D009700 ORTHO05D001112 1.2e-17 95.1 234 29.5
SpUn0089_0010 Schrenkiella parvula HOM05D007948 ORTHO05D006374 3.4e-17 93.6 230 28.3
Sp4g08940 Schrenkiella parvula HOM05D012374 ORTHO05D017111 1.3e-16 91.7 80 61.2
BolC6t37458H Brassica oleracea HOM05D009700 ORTHO05D001112 1.4e-15 88.2 154 29.2
Sp4g00620 Schrenkiella parvula HOM05D012374 ORTHO05D017111 4.1e-15 86.7 120 47.5
BcaC08g44330 Brassica carinata HOM05D011111 ORTHO05D001112 9.2e-15 85.5 178 35.4
BolC5t29748H Brassica oleracea HOM05D011111 ORTHO05D001112 1.2e-14 85.1 180 35.0
BcaC04g20770 Brassica carinata HOM05D011111 ORTHO05D001112 7.8e-14 82.4 178 33.7
Carub.0006s2726 Capsella rubella HOM05D001086 ORTHO05D001112 7.8e-14 82.4 133 27.8
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 7.8e-14 82.4 221 28.5
BcaB02g10138 Brassica carinata HOM05D011111 ORTHO05D001112 1.0e-13 82.0 76 48.7
BcaB08g37466 Brassica carinata HOM05D014639 ORTHO05D018596 2.5e-12 77.4 87 41.4
BcaC06g33763 Brassica carinata HOM05D011111 ORTHO05D001112 2.5e-12 77.4 178 33.1
Ca_02480_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.1e-11 74.3 221 26.2
BolC6t37318H Brassica oleracea HOM05D012374 ORTHO05D033802 8.0e-11 72.4 49 59.2
Sp7g08650 Schrenkiella parvula HOM05D012374 ORTHO05D017111 1.4e-10 71.6 95 46.3
BolC6t35318H Brassica oleracea HOM05D011283 ORTHO05D040514 8.9e-10 68.9 84 45.2
BolC9t57792H Brassica oleracea HOM05D001086 ORTHO05D001112 1.2e-09 68.6 133 29.3
Sp1g30420 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.2e-09 68.6 207 24.6
Aa31LG5G23470 Aethionema arabicum HOM05D001086 ORTHO05D001112 2.0e-09 67.8 142 27.5
Aa31LG8G12090 Aethionema arabicum HOM05D001220 ORTHO05D000110 2.0e-09 67.8 85 40.0
Ca_14247_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.0e-09 67.8 237 26.2
Sp1g31090 Schrenkiella parvula HOM05D012374 ORTHO05D017111 2.0e-09 67.8 69 69.6
arahy.Tifrunner.gnm1.ann1.PJQ1Y5 Arachis hypogaea HOM05D000420 ORTHO05D000110 5.8e-09 66.2 189 22.2
BolC8t48430H Brassica oleracea HOM05D011111 ORTHO05D001112 7.5e-09 65.9 70 45.7
Ca_04921_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 9.8e-09 65.5 177 28.8
Aa31LG6G10910 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.3e-08 65.1 278 24.1
EL10Ac7g17088 Beta vulgaris HOM05D008659 ORTHO05D000110 2.2e-08 64.3 175 28.0
BcaC01g03172 Brassica carinata HOM05D011111 ORTHO05D001112 4.9e-08 63.2 176 29.0
Nitab4.5_0000023g0140 Nicotiana tabacum HOM05D000420 ORTHO05D000110 8.3e-08 62.4 190 24.7
Aa31sc267G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.1e-07 62.0 124 30.6
arahy.Tifrunner.gnm1.ann1.N7XK3P Arachis hypogaea HOM05D000420 ORTHO05D000110 1.1e-07 62.0 176 21.6
BcaC08g42946 Brassica carinata HOM05D014639 ORTHO05D018596 2.4e-07 60.8 91 37.4
C06p01890 Brassica napus HOM05D011283 ORTHO05D040514 4.1e-07 60.1 63 47.6
BolC1t04558H Brassica oleracea HOM05D008134 ORTHO05D006374 5.4e-07 59.7 81 30.9
BolC2t10247H Brassica oleracea HOM05D008134 ORTHO05D006374 7.0e-07 59.3 81 30.9
THA.LOC104813232 Tarenaya hassleriana HOM05D010522 ORTHO05D011833 1.2e-06 58.5 249 21.7
Aa31sc1092G10 Aethionema arabicum HOM05D001086 ORTHO05D001112 1.6e-06 58.2 190 25.3
BolC3t21554H Brassica oleracea HOM05D006180 ORTHO05D033802 1.6e-06 58.2 55 49.1
BcaB08g36733 Brassica carinata HOM05D014639 ORTHO05D018596 3.5e-06 57.0 60 41.7
Aa31sc70G40 Aethionema arabicum HOM05D009700 ORTHO05D012032 4.6e-06 56.6 219 23.7
C04p38260 Brassica napus HOM05D008134 ORTHO05D006374 4.6e-06 56.6 88 31.8
Manes.12G096601 Manihot esculenta HOM05D009368 ORTHO05D000110 4.6e-06 56.6 178 24.7
AL3G41440 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 7.8e-06 55.8 75 32.0


User provided reference genes

Program Settings