Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0423_0020 Schrenkiella parvula HOM05D000051 ORTHO05D000015 6.7e-60 233.8 116 100.0
Thhalv10009950m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-18 95.5 62 80.6
CARHR141500 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-17 93.6 93 54.8
Thhalv10009745m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-17 93.6 62 77.4
AT1G22000 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.0e-17 90.9 65 70.8
Carub.0001s2408 Capsella rubella HOM05D000051 ORTHO05D000015 7.0e-17 90.9 65 73.8
Carub.0004s2887 Capsella rubella HOM05D000051 ORTHO05D000015 9.1e-17 90.5 75 61.3
Carub.0320s0001 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-16 89.7 72 68.1
AL1G38800 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.5e-16 88.2 65 69.2
AL1G38860 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.5e-16 88.2 65 69.2
BcaC06g35108 Brassica carinata HOM05D000051 ORTHO05D000015 7.7e-16 87.4 62 71.0
Thhalv10009991m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.0e-15 87.0 62 72.6
A09p40240 Brassica napus HOM05D000051 ORTHO05D000015 1.7e-15 86.3 62 69.4
BraA09t39522Z Brassica rapa HOM05D000051 ORTHO05D000015 1.7e-15 86.3 62 69.4
AT1G26890 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.2e-15 85.9 62 67.7
Carub.0001s2407 Capsella rubella HOM05D000051 ORTHO05D000015 8.5e-15 84.0 72 63.9
Aa31sc947G30 Aethionema arabicum HOM05D000051 ORTHO05D000015 1.5e-14 83.2 83 55.4
C07p19700 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-14 81.6 62 67.7
BolC7t42486H Brassica oleracea HOM05D000051 ORTHO05D000015 4.2e-14 81.6 62 67.7
BolC2t09676H Brassica oleracea HOM05D000051 ORTHO05D000015 5.5e-14 81.3 76 53.9
Aa31sc352G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.4e-14 80.5 83 55.4
Aa31sc352G40 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.4e-14 80.5 75 57.3
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.4e-14 80.5 83 51.8
BcaC03g15909 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-13 80.1 65 61.5
C02p36720 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-13 80.1 65 61.5
AL2G12050 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-13 79.7 74 56.8
BcaB01g00264 Brassica carinata HOM05D000051 ORTHO05D000015 5.2e-12 74.7 86 45.3
CARHR024990 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.8e-12 74.3 62 61.3
AL7G49240 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.0e-11 72.8 61 57.4
AL7G48990 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.4e-11 72.0 58 60.3
Carub.0002s0899 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-10 69.7 58 60.3
Thhalv10003402m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.8e-10 68.9 58 56.9
BraA09t40121Z Brassica rapa HOM05D000051 ORTHO05D000015 3.7e-10 68.6 94 43.6
BcaC07g39717 Brassica carinata HOM05D000051 ORTHO05D000015 4.8e-10 68.2 86 43.0
BolC8t50491H Brassica oleracea HOM05D000051 ORTHO05D000015 4.8e-10 68.2 86 43.0
BcaC02g07457 Brassica carinata HOM05D000051 ORTHO05D000015 6.3e-10 67.8 58 56.9
C04p66760 Brassica napus HOM05D000051 ORTHO05D000015 6.3e-10 67.8 58 56.9
BolC4t28178H Brassica oleracea HOM05D000051 ORTHO05D000015 6.3e-10 67.8 58 56.9
BcaB05g23264 Brassica carinata HOM05D000051 ORTHO05D000015 8.3e-10 67.4 61 55.7
Carub.0008s1685 Capsella rubella HOM05D000051 ORTHO05D000015 1.1e-09 67.0 71 47.9
C09p14210 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-09 65.9 59 54.2
BolC9t54319H Brassica oleracea HOM05D000051 ORTHO05D000015 2.4e-09 65.9 59 54.2
C08p28890 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-09 64.3 59 55.9
Thhalv10019526m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 7.0e-09 64.3 86 46.5
AL6G35130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.1e-09 63.9 61 55.7
Thhalv10005273m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.1e-09 63.9 58 56.9
BcaNung03592 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-08 63.5 58 51.7
A03p61410 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-08 63.5 61 50.8
BolC7t46369H Brassica oleracea HOM05D000051 ORTHO05D000015 1.2e-08 63.5 61 50.8
Sp3g31850 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.2e-08 63.5 61 47.5
AT5G44850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.6e-08 63.2 58 51.7
C04p66770 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-08 63.2 61 52.5
Thhalv10017690m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.7e-08 62.4 96 40.6
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.7e-08 62.4 80 42.5
Carub.0007s2619 Capsella rubella HOM05D000051 ORTHO05D000015 1.0e-07 60.5 61 47.5
AL1G14840 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-07 59.7 63 50.8
AL8G26900 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.3e-07 59.3 58 50.0
Sp5g13500 Schrenkiella parvula HOM05D000051 ORTHO05D000015 2.3e-07 59.3 58 51.7
Carub.0007s0781 Capsella rubella HOM05D000051 ORTHO05D000015 2.9e-07 58.9 58 48.3
Carub.0008s0418 Capsella rubella HOM05D000051 ORTHO05D000015 2.9e-07 58.9 58 51.7
Carub.0008s1257 Capsella rubella HOM05D000051 ORTHO05D000015 2.9e-07 58.9 58 50.0
CARHR158440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.9e-07 58.9 62 51.6
Thhalv10011126m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-07 58.9 58 50.0
AL3G22230 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.8e-07 58.5 63 54.0
AL4G24690 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.8e-07 58.5 80 40.0
A08p34660 Brassica napus HOM05D000051 ORTHO05D000015 3.8e-07 58.5 58 50.0
BolC8t48902H Brassica oleracea HOM05D000051 ORTHO05D000015 3.8e-07 58.5 58 50.0
BraA08t35374Z Brassica rapa HOM05D000051 ORTHO05D000015 3.8e-07 58.5 58 50.0
BraA08t35378Z Brassica rapa HOM05D000051 ORTHO05D000015 3.8e-07 58.5 58 50.0
Carub.0006s0548 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-07 58.5 58 50.0
Carub.0006s3287 Capsella rubella HOM05D000051 ORTHO05D000015 3.8e-07 58.5 56 51.8
AL3G22250 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.0e-07 58.2 63 54.0
BcaB01g03636 Brassica carinata HOM05D000051 ORTHO05D000015 5.0e-07 58.2 58 48.3
C08p12660 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-07 58.2 61 47.5
C08p12680 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-07 58.2 61 47.5
Carub.0004s2892 Capsella rubella HOM05D000051 ORTHO05D000015 5.0e-07 58.2 54 51.9
BcaNung03949 Brassica carinata HOM05D000051 ORTHO05D000015 8.6e-07 57.4 77 46.8
BraA08t35372Z Brassica rapa HOM05D000051 ORTHO05D000015 8.6e-07 57.4 61 45.9
Carub.0007s3566 Capsella rubella HOM05D000051 ORTHO05D000015 8.6e-07 57.4 61 44.3
Thhalv10028348m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.6e-07 57.4 58 48.3
A03p59830 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 57.0 61 47.5
A09p46570 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-06 57.0 50 52.0
AL6G36280 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-06 56.6 58 51.7
A08p34630 Brassica napus HOM05D000051 ORTHO05D000015 1.5e-06 56.6 61 45.9
Thhalv10028299m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.5e-06 56.6 58 46.6
AL3G22240 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.9e-06 56.2 75 48.0
AT1G05080 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.9e-06 56.2 63 49.2
BolC8t48903H Brassica oleracea HOM05D000051 ORTHO05D000015 1.9e-06 56.2 61 45.9
CARHR178840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.9e-06 56.2 61 44.3
BcaC07g38494 Brassica carinata HOM05D000051 ORTHO05D000015 3.3e-06 55.5 58 48.3
BcaC06g34571 Brassica carinata HOM05D000051 ORTHO05D000015 4.2e-06 55.1 58 46.6
C07p27010 Brassica napus HOM05D000051 ORTHO05D000015 4.2e-06 55.1 58 46.6
BolC7t43232H Brassica oleracea HOM05D000051 ORTHO05D000015 4.2e-06 55.1 58 46.6
BraA03t15039Z Brassica rapa HOM05D000051 ORTHO05D000015 4.2e-06 55.1 61 45.9
CARHR222700 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.2e-06 55.1 73 37.0
Thhalv10022983m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.2e-06 55.1 58 46.6
AL8G15660 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.5e-06 54.7 58 50.0
Carub.0006s2253 Capsella rubella HOM05D000051 ORTHO05D000015 5.5e-06 54.7 62 50.0
Thhalv10011153m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-06 54.7 58 46.6
Thhalv10029383m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-06 54.7 75 42.7


User provided reference genes

Program Settings