Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0244_0020 Schrenkiella parvula HOM05D000643 ORTHO05D026124 6.9e-59 230.3 108 100.0
SpUn0420_0030 Schrenkiella parvula HOM05D000643 ORTHO05D026124 6.9e-59 230.3 108 100.0
Sp3g12490 Schrenkiella parvula HOM05D000643 ORTHO05D026124 1.2e-47 193.0 107 84.1
BcaC05g29107 Brassica carinata HOM05D000643 ORTHO05D010035 1.8e-46 189.1 108 81.5
C05p53230 Brassica napus HOM05D000643 ORTHO05D010035 1.8e-46 189.1 108 81.5
C05p53300 Brassica napus HOM05D000643 ORTHO05D010035 1.8e-46 189.1 108 81.5
BolC5t34011H Brassica oleracea HOM05D000643 ORTHO05D010035 1.8e-46 189.1 108 81.5
Thhalv10020877m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.5e-45 186.0 113 77.0
A05p35180 Brassica napus HOM05D000643 ORTHO05D010035 3.3e-45 184.9 108 81.5
AT3G14210 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 5.6e-45 184.1 108 78.7
BolC5t33998H Brassica oleracea HOM05D000643 ORTHO05D010035 5.6e-45 184.1 104 81.7
Thhalv10020898m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.3e-44 183.0 108 78.7
Thhalv10020881m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.4e-43 179.5 113 76.1
A05p35170 Brassica napus HOM05D000643 ORTHO05D010035 1.8e-43 179.1 100 82.0
BraA05t22330Z Brassica rapa HOM05D000643 ORTHO05D010035 1.8e-43 179.1 100 82.0
BcaB06g25406 Brassica carinata HOM05D000643 ORTHO05D010035 1.2e-42 176.4 110 76.4
BcaC05g29105 Brassica carinata HOM05D000643 ORTHO05D010035 3.4e-42 174.9 100 80.0
C05p53210 Brassica napus HOM05D000643 ORTHO05D010035 3.4e-42 174.9 100 80.0
BolC5t33997H Brassica oleracea HOM05D000643 ORTHO05D010035 3.4e-42 174.9 100 80.0
Carub.0003s1390 Capsella rubella HOM05D000643 ORTHO05D010035 1.8e-38 162.5 95 75.8
CARHR089110 Cardamine hirsuta HOM05D000643 ORTHO05D010035 3.9e-38 161.4 109 70.6
Aa31LG10G1390 Aethionema arabicum HOM05D000643 ORTHO05D010035 1.6e-36 156.0 89 76.4
Aa31LG8G1480 Aethionema arabicum HOM05D000643 ORTHO05D014762 4.8e-36 154.5 88 79.5
Aa31LG3G3790 Aethionema arabicum HOM05D000643 ORTHO05D010035 8.2e-36 153.7 84 79.8
AL1G62710 Arabidopsis lyrata HOM05D000643 ORTHO05D010035 2.4e-35 152.1 106 65.1
A05p17780 Brassica napus HOM05D000643 ORTHO05D010035 3.1e-35 151.8 99 69.7
BcaB02g10874 Brassica carinata HOM05D000643 ORTHO05D010035 5.3e-35 151.0 91 72.5
AT1G54000 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.5e-34 149.4 86 76.7
Sp1g40440 Schrenkiella parvula HOM05D000643 ORTHO05D010035 1.5e-34 149.4 89 71.9
AT1G54010 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 2.0e-34 149.1 89 73.0
Carub.0001s4326 Capsella rubella HOM05D000643 ORTHO05D010035 2.0e-34 149.1 89 71.9
Thhalv10011563m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 2.0e-34 149.1 89 73.0
A08p01340 Brassica napus HOM05D000643 ORTHO05D010035 3.4e-34 148.3 89 74.2
BraA08t32184Z Brassica rapa HOM05D000643 ORTHO05D010035 3.4e-34 148.3 89 74.2
BcaB04g17044 Brassica carinata HOM05D000643 ORTHO05D010035 4.5e-34 147.9 89 71.9
BcaC01g01421 Brassica carinata HOM05D000643 ORTHO05D010035 5.9e-34 147.5 89 73.0
C03p91850 Brassica napus HOM05D000643 ORTHO05D010035 5.9e-34 147.5 89 73.0
BolC3t21505H Brassica oleracea HOM05D000643 ORTHO05D010035 5.9e-34 147.5 89 73.0
AL1G62720 Arabidopsis lyrata HOM05D000643 ORTHO05D010035 1.0e-33 146.7 85 76.5
CARHR044340 Cardamine hirsuta HOM05D000643 ORTHO05D010035 1.0e-33 146.7 88 69.3
CARHR044350 Cardamine hirsuta HOM05D000643 ORTHO05D010035 1.3e-33 146.4 85 77.6
BcaC08g44154 Brassica carinata HOM05D000643 ORTHO05D010035 1.7e-33 146.0 89 73.0
A06p00640 Brassica napus HOM05D000643 ORTHO05D010035 2.2e-33 145.6 84 73.8
BcaC08g44152 Brassica carinata HOM05D000643 ORTHO05D010035 6.5e-33 144.1 107 62.6
A05p17810 Brassica napus HOM05D000643 ORTHO05D010035 6.5e-33 144.1 107 62.6
C06p15470 Brassica napus HOM05D000643 ORTHO05D010035 6.5e-33 144.1 107 62.6
BolC6t36732H Brassica oleracea HOM05D000643 ORTHO05D010035 6.5e-33 144.1 107 62.6
BraA05t20670Z Brassica rapa HOM05D000643 ORTHO05D010035 6.5e-33 144.1 107 62.6
BcaB04g17035 Brassica carinata HOM05D000643 ORTHO05D010035 8.5e-33 143.7 89 71.9
AT1G54020 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.9e-32 142.5 85 74.1
A08p01310 Brassica napus HOM05D000643 ORTHO05D010035 1.9e-32 142.5 89 69.7
Sp1g40450 Schrenkiella parvula HOM05D000643 ORTHO05D010035 1.9e-32 142.5 87 71.3
Thhalv10011572m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 2.5e-32 142.1 84 73.8
BcaC08g43575 Brassica carinata HOM05D000643 ORTHO05D010035 7.2e-32 140.6 84 72.6
A06p00610 Brassica napus HOM05D000643 ORTHO05D010035 7.2e-32 140.6 81 72.8
C06p09760 Brassica napus HOM05D000643 ORTHO05D010035 7.2e-32 140.6 84 72.6
BolC6t36047H Brassica oleracea HOM05D000643 ORTHO05D010035 7.2e-32 140.6 84 72.6
BolC6t36739H Brassica oleracea HOM05D000643 ORTHO05D010035 7.2e-32 140.6 92 70.7
BraA06t23275Z Brassica rapa HOM05D000643 ORTHO05D010035 7.2e-32 140.6 81 72.8
BcaC01g01426 Brassica carinata HOM05D000643 ORTHO05D010035 9.3e-32 140.2 89 68.5
C03p91910 Brassica napus HOM05D000643 ORTHO05D010035 9.3e-32 140.2 89 68.5
BolC3t21509H Brassica oleracea HOM05D000643 ORTHO05D010035 9.3e-32 140.2 89 68.5
BcaB02g10875 Brassica carinata HOM05D000643 ORTHO05D010035 1.6e-31 139.4 88 68.2
BcaB07g32143 Brassica carinata HOM05D000643 ORTHO05D010035 1.6e-31 139.4 81 71.6
BcaB07g32144 Brassica carinata HOM05D000643 ORTHO05D010035 1.6e-31 139.4 81 71.6
C06p15480 Brassica napus HOM05D000643 ORTHO05D010035 2.1e-31 139.0 90 71.1
BcaC08g43581 Brassica carinata HOM05D000643 ORTHO05D010035 3.6e-31 138.3 82 70.7
C06p09800 Brassica napus HOM05D000643 ORTHO05D010035 3.6e-31 138.3 82 70.7
BolC6t36052H Brassica oleracea HOM05D000643 ORTHO05D010035 3.6e-31 138.3 82 70.7
BraA08t32181Z Brassica rapa HOM05D000643 ORTHO05D010035 8.8e-30 133.7 81 71.6
BcaB07g33426 Brassica carinata HOM05D000643 ORTHO05D010035 1.5e-29 132.9 84 67.9
THA.LOC104815602 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 1.5e-29 132.9 84 69.0
THA.LOC104810386 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 9.7e-29 130.2 83 68.7
Carub.0025s0008 Capsella rubella HOM05D000643 ORTHO05D010035 2.8e-28 128.6 82 65.9
THA.LOC104822625 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 4.8e-28 127.9 89 62.9
THA.LOC104810387 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 3.4e-26 121.7 83 62.7
A08p01320 Brassica napus HOM05D000643 ORTHO05D041592 1.0e-25 120.2 84 61.9
Thhalv10011623m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 2.2e-25 119.0 63 82.5
THA.LOC104810380 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 6.5e-25 117.5 83 62.7
BraA08t32182Z Brassica rapa HOM05D000643 ORTHO05D041592 2.5e-24 115.5 84 59.5
THA.LOC104815604 Tarenaya hassleriana HOM05D000643 ORTHO05D026124 6.1e-23 110.9 83 59.0
Cpa.g.sc25.180 Carica papaya HOM05D000643 ORTHO05D010035 1.4e-22 109.8 75 61.3
THA.LOC104810381 Tarenaya hassleriana HOM05D000643 ORTHO05D026124 8.8e-22 107.1 83 56.6
AT3G14220 Arabidopsis thaliana HOM05D000643 ORTHO05D014762 3.7e-20 101.7 69 59.4
AL3G26500 Arabidopsis lyrata HOM05D000643 ORTHO05D014762 8.2e-20 100.5 69 58.0
CARHR089120 Cardamine hirsuta HOM05D000643 ORTHO05D014762 8.2e-20 100.5 69 60.9
Thhalv10021005m.g Eutrema salsugineum HOM05D000643 ORTHO05D014762 1.1e-19 100.1 69 58.0
A01p39470 Brassica napus HOM05D000643 ORTHO05D014762 1.4e-19 99.8 69 58.0
BraA01t03988Z Brassica rapa HOM05D000643 ORTHO05D014762 1.4e-19 99.8 69 58.0
Sp3g12500 Schrenkiella parvula HOM05D000643 ORTHO05D014762 1.4e-19 99.8 69 58.0
BcaC09g48391 Brassica carinata HOM05D000643 ORTHO05D014762 1.8e-19 99.4 69 58.0
C01p50360 Brassica napus HOM05D000643 ORTHO05D014762 1.8e-19 99.4 69 58.0
BolC1t04989H Brassica oleracea HOM05D000643 ORTHO05D014762 1.8e-19 99.4 69 58.0
Carub.0003s1391 Capsella rubella HOM05D000643 ORTHO05D014762 2.4e-19 99.0 68 60.3
THA.LOC104822624 Tarenaya hassleriana HOM05D000643 ORTHO05D014762 2.4e-19 99.0 73 57.5
Aa31LG7G2960 Aethionema arabicum HOM05D000643 ORTHO05D010035 7.2e-16 87.4 68 60.3
THA.LOC104810385 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 2.0e-10 69.3 78 39.7
Aa31LG8G1470 Aethionema arabicum HOM05D000643 ORTHO05D011245 5.9e-10 67.8 78 39.7
THA.LOC104810382 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 1.3e-09 66.6 74 39.2
THA.LOC104810384 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 1.3e-09 66.6 74 39.2
THA.LOC104815603 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 6.5e-09 64.3 74 41.9
Cpa.g.sc25.179 Carica papaya HOM05D000643 ORTHO05D010035 2.5e-08 62.4 72 44.4
Cpa.g.sc25.182 Carica papaya HOM05D000643 ORTHO05D011245 2.5e-08 62.4 72 44.4
THA.LOC104810379 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 2.5e-08 62.4 78 35.9
BolC6t36744H Brassica oleracea HOM05D000643 ORTHO05D011245 3.2e-08 62.0 77 35.1
Carub.0003s1389 Capsella rubella HOM05D000643 ORTHO05D011245 3.2e-08 62.0 78 37.2
AL1G62730 Arabidopsis lyrata HOM05D000643 ORTHO05D011245 4.2e-08 61.6 70 40.0
AL3G26480 Arabidopsis lyrata HOM05D000643 ORTHO05D011245 4.2e-08 61.6 78 35.9
CARHR044360 Cardamine hirsuta HOM05D000643 ORTHO05D011245 4.2e-08 61.6 75 40.0
CARHR089100 Cardamine hirsuta HOM05D000643 ORTHO05D011245 4.2e-08 61.6 78 35.9
Atru.chr1.4123 Acer truncatum HOM05D000643 ORTHO05D000663 7.2e-08 60.8 66 39.4
Thhalv10011556m.g Eutrema salsugineum HOM05D000643 ORTHO05D011245 7.2e-08 60.8 75 37.3
BcaC08g44156 Brassica carinata HOM05D000643 ORTHO05D011245 9.4e-08 60.5 75 36.0
C06p15520 Brassica napus HOM05D000643 ORTHO05D011245 9.4e-08 60.5 75 36.0
A05p17760 Brassica napus HOM05D000643 ORTHO05D011245 1.6e-07 59.7 73 37.0
Aa31LG10G1380 Aethionema arabicum HOM05D000643 ORTHO05D011245 2.1e-07 59.3 70 37.1
BraA05t20668Z Brassica rapa HOM05D000643 ORTHO05D011245 2.1e-07 59.3 73 37.0
Sp1g40460 Schrenkiella parvula HOM05D000643 ORTHO05D011245 2.1e-07 59.3 75 36.0
Carub.0001s4327 Capsella rubella HOM05D000643 ORTHO05D011245 3.6e-07 58.5 70 37.1
A08p01300 Brassica napus HOM05D000643 ORTHO05D011245 8.0e-07 57.4 70 38.6
BraA08t32180Z Brassica rapa HOM05D000643 ORTHO05D011245 8.0e-07 57.4 70 38.6
BcaB02g10872 Brassica carinata HOM05D000643 ORTHO05D011245 1.0e-06 57.0 70 37.1
C03p91920 Brassica napus HOM05D000643 ORTHO05D011245 1.0e-06 57.0 70 38.6
BolC3t21510H Brassica oleracea HOM05D000643 ORTHO05D011245 1.0e-06 57.0 70 38.6
BcaB04g17034 Brassica carinata HOM05D000643 ORTHO05D011245 1.4e-06 56.6 70 37.1
A06p00630 Brassica napus HOM05D000643 ORTHO05D011245 1.8e-06 56.2 70 35.7
BraA06t23276Z Brassica rapa HOM05D000643 ORTHO05D011245 1.8e-06 56.2 70 35.7
FvH4_6g35520 Fragaria vesca HOM05D000643 ORTHO05D000663 2.3e-06 55.8 67 38.8
Atru.chr1.4121 Acer truncatum HOM05D000643 ORTHO05D000663 4.0e-06 55.1 72 36.1
CsaV3_2G017650 Cucumis sativus L. HOM05D000643 ORTHO05D000663 4.0e-06 55.1 77 36.4
ClCG02G001050 Citrullus lanatus HOM05D000643 ORTHO05D000663 5.2e-06 54.7 79 35.4
MELO3C020957.2 Cucumis melo HOM05D000643 ORTHO05D000663 5.2e-06 54.7 77 35.1
SMO141G0050 Selaginella moellendorffii HOM05D000065 ORTHO05D000758 6.7e-06 54.3 75 37.3


User provided reference genes

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