Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 5.9e-170 600.9 332 100.0
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 1.4e-118 430.3 352 73.9
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 1.2e-117 427.2 352 72.4
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 2.9e-116 422.5 358 72.1
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 7.9e-114 414.5 360 70.8
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 2.3e-113 412.9 350 72.6
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 2.0e-96 356.7 353 67.4
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 5.7e-96 355.1 354 68.9
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 1.7e-95 353.6 355 68.2
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 9.7e-88 327.8 352 64.2
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 9.7e-88 327.8 352 64.2
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 3.7e-87 325.9 352 64.2
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 2.8e-71 273.1 349 54.7
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 5.4e-70 268.9 364 52.7
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 9.2e-46 188.3 246 49.2
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 2.7e-45 186.8 387 41.1
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 6.0e-45 185.7 255 48.6
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.0e-44 184.9 241 46.9
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 2.3e-44 183.7 241 48.1
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 6.6e-44 182.2 271 48.0
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 6.6e-44 182.2 236 50.8
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 3.3e-43 179.9 395 37.0
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 9.5e-43 178.3 345 39.7
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.2e-42 177.9 274 46.0
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.6e-42 177.6 264 44.7
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 2.1e-42 177.2 379 39.1
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 3.6e-42 176.4 279 44.1
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 2.3e-41 173.7 342 36.8
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 6.8e-41 172.2 235 48.9
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.6e-40 170.2 260 45.4
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 4.4e-40 169.5 347 36.6
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 9.9e-40 168.3 302 41.1
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 4.9e-39 166.0 236 44.1
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 8.3e-39 165.2 292 43.2
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.1e-38 164.9 296 40.9
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 1.1e-38 164.9 381 36.0
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 5.4e-38 162.5 274 42.0
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 2.1e-37 160.6 288 42.4
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.0e-36 156.8 262 40.8
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 3.9e-36 156.4 389 36.5
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 1.5e-35 154.5 363 37.7
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 9.5e-35 151.8 334 38.3
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 3.6e-34 149.8 307 37.5
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 2.4e-33 147.1 387 35.4
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 4.0e-33 146.4 387 35.4
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 6.8e-33 145.6 382 35.3
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 8.9e-33 145.2 387 35.1
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 8.9e-33 145.2 387 35.1
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 1.5e-32 144.4 351 33.6
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 1.5e-32 144.4 244 39.8
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 2.6e-32 143.7 284 42.3
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 3.4e-32 143.3 328 37.8
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 4.4e-32 142.9 262 42.7
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 5.8e-32 142.5 268 38.8
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 5.8e-32 142.5 269 39.0
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 7.6e-32 142.1 296 35.8
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 7.6e-32 142.1 318 37.7
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 9.9e-32 141.7 384 32.6
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.3e-31 141.4 241 39.8
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 1.3e-31 141.4 243 39.1
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.8e-31 139.8 269 38.7
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 9.2e-30 135.2 237 40.1
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 2.1e-29 134.0 242 40.5
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 2.7e-29 133.7 337 36.2
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 2.7e-29 133.7 241 36.9
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.7e-28 131.0 321 33.6
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.7e-28 131.0 417 34.5
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 3.0e-28 130.2 318 35.8
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 1.2e-26 124.8 117 63.2
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 3.6e-26 123.2 220 40.0
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.4e-25 121.3 296 36.1
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.8e-25 120.9 268 35.8
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 5.3e-25 119.4 368 34.5
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 2.0e-24 117.5 317 35.0
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 2.0e-24 117.5 232 34.9
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 9.9e-24 115.2 256 38.3
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 1.3e-23 114.8 371 29.9
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 1.7e-23 114.4 322 35.4
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 6.4e-23 112.5 287 35.5
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 1.4e-22 111.3 348 35.3
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 1.9e-22 110.9 214 40.7
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 9.3e-22 108.6 373 29.0
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 1.5e-19 101.3 259 34.4
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 4.3e-19 99.8 169 42.6
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 5.8e-16 89.4 298 32.9
FAN04G1782 Fragaria x ananassa HOM05D007666 ORTHO05D009567 7.9e-13 79.0 216 35.6
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 1.3e-12 78.2 357 31.7
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 5.1e-12 76.3 187 33.2
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.2e-08 65.1 170 34.7
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 1.3e-07 61.6 240 32.5
COL.COLO4_10689 Corchorus olitorius HOM05D007666 ORTHO05D009567 4.9e-07 59.7 103 36.9


User provided reference genes

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