Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0244_0020 Schrenkiella parvula HOM05D000643 ORTHO05D026124 3.4e-64 248.1 117 100.0
SpUn0420_0030 Schrenkiella parvula HOM05D000643 ORTHO05D026124 5.7e-59 230.7 108 100.0
BcaC05g29107 Brassica carinata HOM05D000643 ORTHO05D010035 1.7e-50 202.6 117 81.2
C05p53230 Brassica napus HOM05D000643 ORTHO05D010035 1.7e-50 202.6 117 81.2
C05p53300 Brassica napus HOM05D000643 ORTHO05D010035 1.7e-50 202.6 117 81.2
BolC5t34011H Brassica oleracea HOM05D000643 ORTHO05D010035 1.7e-50 202.6 117 81.2
A05p35180 Brassica napus HOM05D000643 ORTHO05D010035 3.1e-49 198.4 117 81.2
AT3G14210 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.2e-48 196.4 116 78.4
Thhalv10020898m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.2e-48 196.4 117 77.8
Thhalv10020877m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.6e-48 196.1 119 77.3
BcaB06g25406 Brassica carinata HOM05D000643 ORTHO05D010035 5.9e-48 194.1 119 78.2
Sp3g12490 Schrenkiella parvula HOM05D000643 ORTHO05D026124 1.0e-47 193.4 107 84.1
Thhalv10020881m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 3.8e-47 191.4 119 77.3
A05p35170 Brassica napus HOM05D000643 ORTHO05D010035 6.5e-47 190.7 109 80.7
BraA05t22330Z Brassica rapa HOM05D000643 ORTHO05D010035 6.5e-47 190.7 109 80.7
BolC5t33998H Brassica oleracea HOM05D000643 ORTHO05D010035 1.9e-46 189.1 117 77.8
BcaC05g29105 Brassica carinata HOM05D000643 ORTHO05D010035 1.2e-45 186.4 109 78.9
C05p53210 Brassica napus HOM05D000643 ORTHO05D010035 1.2e-45 186.4 109 78.9
BolC5t33997H Brassica oleracea HOM05D000643 ORTHO05D010035 1.2e-45 186.4 109 78.9
Carub.0003s1390 Capsella rubella HOM05D000643 ORTHO05D010035 3.1e-41 171.8 104 73.1
CARHR089110 Cardamine hirsuta HOM05D000643 ORTHO05D010035 7.0e-41 170.6 115 70.4
Aa31LG10G1390 Aethionema arabicum HOM05D000643 ORTHO05D010035 1.2e-40 169.9 98 75.5
A05p17780 Brassica napus HOM05D000643 ORTHO05D010035 1.0e-39 166.8 108 70.4
Aa31LG8G1480 Aethionema arabicum HOM05D000643 ORTHO05D014762 1.3e-39 166.4 97 77.3
Aa31LG3G3790 Aethionema arabicum HOM05D000643 ORTHO05D010035 1.7e-39 166.0 93 77.4
BcaB02g10874 Brassica carinata HOM05D000643 ORTHO05D010035 2.9e-39 165.2 100 72.0
AL1G62710 Arabidopsis lyrata HOM05D000643 ORTHO05D010035 1.5e-38 162.9 115 64.3
Thhalv10011563m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.5e-38 162.9 98 72.4
BcaC08g44154 Brassica carinata HOM05D000643 ORTHO05D010035 5.5e-38 161.0 98 73.5
Sp1g40440 Schrenkiella parvula HOM05D000643 ORTHO05D010035 5.5e-38 161.0 98 70.4
AL1G62720 Arabidopsis lyrata HOM05D000643 ORTHO05D010035 9.5e-38 160.2 94 75.5
Carub.0001s4326 Capsella rubella HOM05D000643 ORTHO05D010035 9.5e-38 160.2 98 70.4
AT1G54000 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.2e-37 159.8 95 74.7
A08p01340 Brassica napus HOM05D000643 ORTHO05D010035 1.2e-37 159.8 98 73.5
BraA08t32184Z Brassica rapa HOM05D000643 ORTHO05D010035 1.2e-37 159.8 98 73.5
AT1G54010 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.6e-37 159.5 98 71.4
BraA05t20670Z Brassica rapa HOM05D000643 ORTHO05D010035 1.6e-37 159.5 116 63.8
BcaC01g01421 Brassica carinata HOM05D000643 ORTHO05D010035 2.1e-37 159.1 98 72.4
C03p91850 Brassica napus HOM05D000643 ORTHO05D010035 2.1e-37 159.1 98 72.4
BolC3t21505H Brassica oleracea HOM05D000643 ORTHO05D010035 2.1e-37 159.1 98 72.4
A06p00640 Brassica napus HOM05D000643 ORTHO05D010035 4.7e-37 157.9 93 72.0
CARHR044350 Cardamine hirsuta HOM05D000643 ORTHO05D010035 4.7e-37 157.9 94 75.5
BcaB04g17044 Brassica carinata HOM05D000643 ORTHO05D010035 6.1e-37 157.5 98 70.4
AT1G54020 Arabidopsis thaliana HOM05D000643 ORTHO05D010035 1.8e-36 156.0 94 73.4
CARHR044340 Cardamine hirsuta HOM05D000643 ORTHO05D010035 1.8e-36 156.0 98 67.3
Thhalv10011572m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.8e-36 156.0 93 73.1
BolC6t36739H Brassica oleracea HOM05D000643 ORTHO05D010035 2.3e-36 155.6 101 71.3
C06p15480 Brassica napus HOM05D000643 ORTHO05D010035 6.8e-36 154.1 99 71.7
Sp1g40450 Schrenkiella parvula HOM05D000643 ORTHO05D010035 8.9e-36 153.7 96 69.8
BcaB04g17035 Brassica carinata HOM05D000643 ORTHO05D010035 1.5e-35 152.9 96 70.8
BcaC08g43575 Brassica carinata HOM05D000643 ORTHO05D010035 1.5e-35 152.9 93 71.0
BcaC08g44152 Brassica carinata HOM05D000643 ORTHO05D010035 1.5e-35 152.9 116 61.2
A05p17810 Brassica napus HOM05D000643 ORTHO05D010035 1.5e-35 152.9 116 61.2
A06p00610 Brassica napus HOM05D000643 ORTHO05D010035 1.5e-35 152.9 93 68.8
C06p09760 Brassica napus HOM05D000643 ORTHO05D010035 1.5e-35 152.9 93 71.0
C06p15470 Brassica napus HOM05D000643 ORTHO05D010035 1.5e-35 152.9 116 61.2
BolC6t36047H Brassica oleracea HOM05D000643 ORTHO05D010035 1.5e-35 152.9 93 71.0
BolC6t36732H Brassica oleracea HOM05D000643 ORTHO05D010035 1.5e-35 152.9 116 61.2
BraA06t23275Z Brassica rapa HOM05D000643 ORTHO05D010035 1.5e-35 152.9 93 68.8
BcaB07g32143 Brassica carinata HOM05D000643 ORTHO05D010035 3.4e-35 151.8 93 67.7
BcaB07g32144 Brassica carinata HOM05D000643 ORTHO05D010035 3.4e-35 151.8 93 67.7
A08p01310 Brassica napus HOM05D000643 ORTHO05D010035 3.4e-35 151.8 96 68.8
BcaC08g43581 Brassica carinata HOM05D000643 ORTHO05D010035 7.5e-35 150.6 94 67.0
C06p09800 Brassica napus HOM05D000643 ORTHO05D010035 7.5e-35 150.6 94 67.0
BolC6t36052H Brassica oleracea HOM05D000643 ORTHO05D010035 7.5e-35 150.6 94 67.0
BcaC01g01426 Brassica carinata HOM05D000643 ORTHO05D010035 1.7e-34 149.4 96 67.7
C03p91910 Brassica napus HOM05D000643 ORTHO05D010035 1.7e-34 149.4 96 67.7
BolC3t21509H Brassica oleracea HOM05D000643 ORTHO05D010035 1.7e-34 149.4 96 67.7
BcaB02g10875 Brassica carinata HOM05D000643 ORTHO05D010035 4.9e-34 147.9 98 65.3
BcaB07g33426 Brassica carinata HOM05D000643 ORTHO05D010035 4.1e-33 144.8 93 66.7
BraA08t32181Z Brassica rapa HOM05D000643 ORTHO05D010035 1.6e-32 142.9 88 70.5
THA.LOC104815602 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 3.5e-32 141.7 98 64.3
THA.LOC104810386 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 8.6e-31 137.1 86 69.8
A08p01320 Brassica napus HOM05D000643 ORTHO05D041592 7.3e-30 134.0 93 62.4
THA.LOC104822625 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 7.3e-30 134.0 100 61.0
Thhalv10011623m.g Eutrema salsugineum HOM05D000643 ORTHO05D010035 1.6e-29 132.9 72 80.6
BraA08t32182Z Brassica rapa HOM05D000643 ORTHO05D041592 1.8e-28 129.4 93 60.2
Carub.0025s0008 Capsella rubella HOM05D000643 ORTHO05D010035 2.3e-28 129.0 82 65.9
THA.LOC104810387 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 1.5e-27 126.3 85 63.5
THA.LOC104810380 Tarenaya hassleriana HOM05D000643 ORTHO05D010035 5.8e-27 124.4 86 64.0
Cpa.g.sc25.180 Carica papaya HOM05D000643 ORTHO05D010035 5.4e-25 117.9 84 60.7
THA.LOC104815604 Tarenaya hassleriana HOM05D000643 ORTHO05D026124 2.0e-24 115.9 86 59.3
THA.LOC104810381 Tarenaya hassleriana HOM05D000643 ORTHO05D026124 3.0e-23 112.1 86 57.0
AT3G14220 Arabidopsis thaliana HOM05D000643 ORTHO05D014762 3.1e-20 102.1 69 59.4
CARHR089120 Cardamine hirsuta HOM05D000643 ORTHO05D014762 3.1e-20 102.1 81 54.3
AL3G26500 Arabidopsis lyrata HOM05D000643 ORTHO05D014762 6.8e-20 100.9 69 58.0
Thhalv10021005m.g Eutrema salsugineum HOM05D000643 ORTHO05D014762 8.9e-20 100.5 69 58.0
A01p39470 Brassica napus HOM05D000643 ORTHO05D014762 1.2e-19 100.1 69 58.0
BraA01t03988Z Brassica rapa HOM05D000643 ORTHO05D014762 1.2e-19 100.1 69 58.0
Sp3g12500 Schrenkiella parvula HOM05D000643 ORTHO05D014762 1.2e-19 100.1 69 58.0
BcaC09g48391 Brassica carinata HOM05D000643 ORTHO05D014762 1.5e-19 99.8 69 58.0
C01p50360 Brassica napus HOM05D000643 ORTHO05D014762 1.5e-19 99.8 69 58.0
BolC1t04989H Brassica oleracea HOM05D000643 ORTHO05D014762 1.5e-19 99.8 69 58.0
Carub.0003s1391 Capsella rubella HOM05D000643 ORTHO05D014762 2.0e-19 99.4 68 60.3
THA.LOC104822624 Tarenaya hassleriana HOM05D000643 ORTHO05D014762 2.0e-19 99.4 73 57.5
Aa31LG7G2960 Aethionema arabicum HOM05D000643 ORTHO05D010035 7.8e-16 87.4 68 60.3
THA.LOC104810385 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 2.6e-11 72.4 87 39.1
Aa31LG8G1470 Aethionema arabicum HOM05D000643 ORTHO05D011245 1.3e-10 70.1 80 40.0
THA.LOC104810382 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 2.2e-10 69.3 80 38.8
THA.LOC104810384 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 2.2e-10 69.3 80 38.8
CARHR089100 Cardamine hirsuta HOM05D000643 ORTHO05D011245 1.9e-09 66.2 80 37.5
BolC6t36744H Brassica oleracea HOM05D000643 ORTHO05D011245 2.4e-09 65.9 91 34.1
AL1G62730 Arabidopsis lyrata HOM05D000643 ORTHO05D011245 4.1e-09 65.1 84 38.1
THA.LOC104810379 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 5.4e-09 64.7 80 36.2
THA.LOC104815603 Tarenaya hassleriana HOM05D000643 ORTHO05D011245 5.4e-09 64.7 74 41.9
BcaC08g44156 Brassica carinata HOM05D000643 ORTHO05D011245 7.1e-09 64.3 89 34.8
C06p15520 Brassica napus HOM05D000643 ORTHO05D011245 7.1e-09 64.3 89 34.8
Thhalv10011556m.g Eutrema salsugineum HOM05D000643 ORTHO05D011245 7.1e-09 64.3 89 36.0
A05p17760 Brassica napus HOM05D000643 ORTHO05D011245 9.2e-09 63.9 87 35.6
CARHR044360 Cardamine hirsuta HOM05D000643 ORTHO05D011245 9.2e-09 63.9 77 40.3
BraA05t20668Z Brassica rapa HOM05D000643 ORTHO05D011245 1.2e-08 63.5 87 35.6
Carub.0003s1389 Capsella rubella HOM05D000643 ORTHO05D011245 1.2e-08 63.5 80 37.5
Atru.chr1.4123 Acer truncatum HOM05D000643 ORTHO05D000663 1.6e-08 63.2 73 38.4
Aa31LG10G1380 Aethionema arabicum HOM05D000643 ORTHO05D011245 1.6e-08 63.2 84 34.5
AL3G26480 Arabidopsis lyrata HOM05D000643 ORTHO05D011245 1.6e-08 63.2 80 36.2
Sp1g40460 Schrenkiella parvula HOM05D000643 ORTHO05D011245 1.6e-08 63.2 84 35.7
Carub.0001s4327 Capsella rubella HOM05D000643 ORTHO05D011245 2.1e-08 62.8 84 35.7
Cpa.g.sc25.179 Carica papaya HOM05D000643 ORTHO05D010035 2.1e-08 62.8 72 44.4
Cpa.g.sc25.182 Carica papaya HOM05D000643 ORTHO05D011245 2.1e-08 62.8 72 44.4
A08p01300 Brassica napus HOM05D000643 ORTHO05D011245 6.0e-08 61.2 84 36.9
BraA08t32180Z Brassica rapa HOM05D000643 ORTHO05D011245 6.0e-08 61.2 84 36.9
BcaB02g10872 Brassica carinata HOM05D000643 ORTHO05D011245 7.8e-08 60.8 84 35.7
C03p91920 Brassica napus HOM05D000643 ORTHO05D011245 7.8e-08 60.8 84 36.9
BolC3t21510H Brassica oleracea HOM05D000643 ORTHO05D011245 7.8e-08 60.8 84 36.9
A06p00630 Brassica napus HOM05D000643 ORTHO05D011245 1.7e-07 59.7 84 34.5
BraA06t23276Z Brassica rapa HOM05D000643 ORTHO05D011245 1.7e-07 59.7 84 34.5
BcaB04g17034 Brassica carinata HOM05D000643 ORTHO05D011245 3.9e-07 58.5 77 36.4
Atru.chr1.4121 Acer truncatum HOM05D000643 ORTHO05D000663 5.1e-07 58.2 81 34.6
FvH4_6g35520 Fragaria vesca HOM05D000643 ORTHO05D000663 5.1e-07 58.2 80 36.2
MELO3C020957.2 Cucumis melo HOM05D000643 ORTHO05D000663 8.6e-07 57.4 86 33.7
CsaV3_2G017650 Cucumis sativus L. HOM05D000643 ORTHO05D000663 8.6e-07 57.4 79 36.7
ClCG02G001050 Citrullus lanatus HOM05D000643 ORTHO05D000663 1.1e-06 57.0 88 34.1
BcaB07g33428 Brassica carinata HOM05D000643 ORTHO05D011245 5.6e-06 54.7 85 34.1
CSS0044301 Camellia sinensis var. sinensis HOM05D000643 ORTHO05D000663 5.6e-06 54.7 78 34.6
CSS0046491 Camellia sinensis var. sinensis HOM05D000643 ORTHO05D000663 5.6e-06 54.7 78 34.6
RcHm_v2.0_Chr2g0147111 Rosa chinensis HOM05D000643 ORTHO05D000663 5.6e-06 54.7 80 33.8
SMO141G0050 Selaginella moellendorffii HOM05D000065 ORTHO05D000758 7.3e-06 54.3 75 37.3
SEGI_40470 Sequoiadendron giganteum HOM05D000065 ORTHO05D000758 9.5e-06 53.9 74 33.8


User provided reference genes

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