Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0242_NC2199 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.2e-50 201.4 102 100.0
BcaC06g35602 Brassica carinata HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
A07p08370 Brassica napus HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
C07p13070 Brassica napus HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
C09p75660 Brassica napus HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
BolC7t41801H Brassica oleracea HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
BraA07t28623Z Brassica rapa HOM05D005505 ORTHO05D006974 2.3e-48 195.3 102 98.0
BcaB06g26566 Brassica carinata HOM05D005505 ORTHO05D006974 3.0e-48 194.9 102 97.1
Thhalv10002522m.g Eutrema salsugineum HOM05D005505 ORTHO05D006974 6.7e-48 193.7 102 97.1
AT3G24200 Arabidopsis thaliana HOM05D005505 ORTHO05D006974 1.5e-47 192.6 102 95.1
CARHR099990 Cardamine hirsuta HOM05D005505 ORTHO05D006974 2.0e-47 192.2 102 94.1
Carub.0003s2430 Capsella rubella HOM05D005505 ORTHO05D006974 6.3e-46 187.2 102 93.1
SpUn0001_0240 Schrenkiella parvula HOM05D005505 ORTHO05D006974 1.8e-45 185.7 101 94.1
Aa31LG8G10580 Aethionema arabicum HOM05D005505 ORTHO05D006974 5.3e-45 184.1 102 89.2
Manes.03G149700 Manihot esculenta HOM05D005505 ORTHO05D006974 9.7e-39 163.3 102 79.4
MELO3C016329.2 Cucumis melo HOM05D005505 ORTHO05D006974 1.3e-38 162.9 102 77.5
THA.LOC104821613 Tarenaya hassleriana HOM05D005505 ORTHO05D006974 1.3e-38 162.9 100 81.0
Thecc.04G209900 Theobroma cacao HOM05D005505 ORTHO05D006974 1.7e-38 162.5 102 78.4
Sed0009691 Sechium edule HOM05D005505 ORTHO05D006974 2.2e-38 162.2 102 78.4
COL.COLO4_20306 Corchorus olitorius HOM05D005505 ORTHO05D006974 2.8e-38 161.8 102 78.4
CsaV3_4G006210 Cucumis sativus L. HOM05D005505 ORTHO05D006974 2.8e-38 161.8 102 77.5
Gohir.A09G202800 Gossypium hirsutum HOM05D005505 ORTHO05D006974 8.2e-38 160.2 102 76.5
Actinidia35954 Actinidia chinensis HOM05D005505 ORTHO05D006974 1.4e-37 159.5 102 76.5
Duzib212G0911 Durio zibethinus HOM05D005505 ORTHO05D006974 1.8e-37 159.1 102 77.5
Gohir.D09G196900 Gossypium hirsutum HOM05D005505 ORTHO05D006974 3.1e-37 158.3 102 75.5
Potri.001G051200 Populus trichocarpa HOM05D005505 ORTHO05D006974 3.1e-37 158.3 102 77.5
Cc03_g07370 Coffea canephora HOM05D005505 ORTHO05D006974 4.1e-37 157.9 102 75.5
Migut.G00632 Erythranthe guttata HOM05D005505 ORTHO05D006974 4.1e-37 157.9 102 73.5
Gorai.006G220300 Gossypium raimondii HOM05D005505 ORTHO05D006974 4.1e-37 157.9 102 75.5
Ciclev10004754m.g Citrus clementina HOM05D005505 ORTHO05D006974 5.3e-37 157.5 99 78.8
Duzib151G0717 Durio zibethinus HOM05D005505 ORTHO05D006974 5.3e-37 157.5 102 76.5
Glyma.08G345200 Glycine max HOM05D005505 ORTHO05D006974 7.0e-37 157.1 100 75.0
QL09p050425 Quercus lobata HOM05D005505 ORTHO05D006974 9.1e-37 156.8 101 74.3
FAN04G0744 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.2e-36 156.4 102 74.5
FAN04G1715 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.2e-36 156.4 102 74.5
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea HOM05D005505 ORTHO05D006974 1.6e-36 156.0 100 75.0
CANSAT21G2364 Cannabis sativa HOM05D005505 ORTHO05D006974 1.6e-36 156.0 102 74.5
Sabra01G0035800 Salix brachista HOM05D005505 ORTHO05D006974 1.6e-36 156.0 100 76.0
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea HOM05D005505 ORTHO05D006974 2.0e-36 155.6 100 75.0
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea HOM05D005505 ORTHO05D006974 2.0e-36 155.6 100 75.0
Cpa.g.sc59.105 Carica papaya HOM05D005505 ORTHO05D006974 2.0e-36 155.6 102 75.5
FvH4_5g03680 Fragaria vesca HOM05D005505 ORTHO05D006974 2.0e-36 155.6 102 74.5
TPR.G26848 Trifolium pratense HOM05D005505 ORTHO05D006974 3.5e-36 154.8 100 74.0
FAN13G1424 Fragaria x ananassa HOM05D005505 ORTHO05D006974 4.5e-36 154.5 102 73.5
Psat3g151840 Pisum sativum HOM05D005505 ORTHO05D006974 4.5e-36 154.5 100 75.0
Ca_07402_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 5.9e-36 154.1 100 73.0
Eucgr.H00086 Eucalyptus grandis HOM05D005505 ORTHO05D006974 5.9e-36 154.1 102 75.5
Lalb_Chr19g0126031 Lupinus albus HOM05D005505 ORTHO05D006974 5.9e-36 154.1 100 74.0
Psat7g176120 Pisum sativum HOM05D005505 ORTHO05D006974 5.9e-36 154.1 100 74.0
Lj1g0020537 Lotus japonicus HOM05D005505 ORTHO05D006974 1.0e-35 153.3 100 74.0
PGR142G3770 Punica granatum HOM05D005505 ORTHO05D006974 1.0e-35 153.3 102 72.5
RcHm_v2.0_Chr7g0196051 Rosa chinensis HOM05D005505 ORTHO05D006974 1.0e-35 153.3 102 72.5
vmacro00503 Vaccinium macrocarpon HOM05D005505 ORTHO05D006974 1.0e-35 153.3 102 72.5
FAN18G0472 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.3e-35 152.9 102 72.5
Phvul.008G135500 Phaseolus vulgaris HOM05D005505 ORTHO05D006974 1.3e-35 152.9 100 74.0
Rhsim09G0051500 Rhododendron simsii HOM05D005505 ORTHO05D006974 1.7e-35 152.5 102 72.5
TAR636G3130 Trochodendron aralioides HOM05D005505 ORTHO05D006974 1.7e-35 152.5 102 74.5
TWI53G0062 Tripterygium wilfordii HOM05D005505 ORTHO05D006974 2.2e-35 152.1 100 74.0
CAN.G500.70 Capsicum annuum HOM05D005505 ORTHO05D006974 2.9e-35 151.8 102 70.6
SGA_v2.0_scaffold380G50374 Striga asiatica HOM05D005505 ORTHO05D006974 2.9e-35 151.8 102 72.5
CiPaw.02G067600 Carya illinoinensis HOM05D005505 ORTHO05D006974 3.8e-35 151.4 102 72.5
FAN13G2718 Fragaria x ananassa HOM05D005505 ORTHO05D006974 3.8e-35 151.4 102 72.5
SGA_v2.0_scaffold57G20149 Striga asiatica HOM05D005505 ORTHO05D006974 3.8e-35 151.4 102 71.6
Atru.chr4.1761 Acer truncatum HOM05D005505 ORTHO05D006974 5.0e-35 151.0 99 73.7
ClCG07G007730 Citrullus lanatus HOM05D005505 ORTHO05D006974 6.5e-35 150.6 126 63.5
Lalb_Chr03g0041191 Lupinus albus HOM05D005505 ORTHO05D006974 6.5e-35 150.6 100 74.0
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 6.5e-35 150.6 102 69.6
MSTRG.9830 Avicennia marina HOM05D005505 ORTHO05D006974 8.5e-35 150.2 102 69.6
Medtr2g060550 Medicago truncatula HOM05D005505 ORTHO05D006974 8.5e-35 150.2 100 70.0
DCAR_030788 Daucus carota HOM05D005505 ORTHO05D006974 1.1e-34 149.8 102 69.6
Medtr7g051960 Medicago truncatula HOM05D005505 ORTHO05D006974 1.1e-34 149.8 100 70.0
SalBow2G0189 Salvia bowleyana HOM05D005505 ORTHO05D006974 2.5e-34 148.7 102 68.6
PSO017G4123 Papaver somniferum HOM05D005505 ORTHO05D006974 3.2e-34 148.3 100 70.0
Nn8g40056 Nelumbo nucifera HOM05D005505 ORTHO05D006974 4.2e-34 147.9 102 69.6
Lj5g0018216 Lotus japonicus HOM05D005505 ORTHO05D006974 5.5e-34 147.5 100 74.0
Prupe.5G110900 Prunus persica HOM05D005505 ORTHO05D006974 5.5e-34 147.5 102 71.6
Lj3A577G5 Lonicera japonica HOM05D005505 ORTHO05D006974 7.2e-34 147.1 102 67.6
MD06G1096300 Malus domestica HOM05D005505 ORTHO05D006974 7.2e-34 147.1 102 70.6
Peaxi162Scf00047g01039 Petunia axillaris HOM05D005505 ORTHO05D006974 9.4e-34 146.7 102 68.6
Nitab4.5_0000306g0020 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.2e-33 146.4 101 70.3
Os03g0839100 Oryza sativa ssp. japonica HOM05D005505 ORTHO05D006974 1.2e-33 146.4 102 69.6
Solyc09g091570.2 Solanum lycopersicum HOM05D005505 ORTHO05D006974 1.6e-33 146.0 102 68.6
Sopen09g034490 Solanum pennellii HOM05D005505 ORTHO05D006974 1.6e-33 146.0 102 68.6
ATR0787G156 Amborella trichopoda HOM05D005505 ORTHO05D006974 3.6e-33 144.8 102 68.6
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 4.7e-33 144.4 72 100.0
AUR62025680 Chenopodium quinoa HOM05D005505 ORTHO05D006974 4.7e-33 144.4 101 68.3
HanXRQChr10g0278391 Helianthus annuus HOM05D005505 ORTHO05D006974 6.1e-33 144.1 102 67.6
PGSC0003DMG400029626 Solanum tuberosum HOM05D005505 ORTHO05D006974 6.1e-33 144.1 102 67.6
ECA233G0503 Erigeron canadensis HOM05D005505 ORTHO05D006974 1.4e-32 142.9 102 66.7
PSO063G3796 Papaver somniferum HOM05D005505 ORTHO05D006974 1.4e-32 142.9 100 67.0
GSVIVG01012536001 Vitis vinifera HOM05D005505 ORTHO05D006974 1.4e-32 142.9 94 74.5
Zm00001eb211070 Zea mays HOM05D005505 ORTHO05D006974 1.4e-32 142.9 102 67.6
AUR62001295 Chenopodium quinoa HOM05D005505 ORTHO05D006974 1.8e-32 142.5 101 67.3
MBI10_g16825_MAGBIO Magnolia biondii HOM05D005505 ORTHO05D006974 2.3e-32 142.1 100 69.0
EL10Ac7g18096 Beta vulgaris HOM05D005505 ORTHO05D006974 3.0e-32 141.7 101 68.3
Sc24g0002560 Simmondsia chinensis HOM05D005505 ORTHO05D006974 8.8e-32 140.2 100 67.0
Lsat_1_v5_gn_2_43080 Lactuca sativa HOM05D005505 ORTHO05D006974 2.6e-31 138.7 95 69.5
SHI00938 Sapria himalayana HOM05D005505 ORTHO05D006974 2.6e-31 138.7 100 65.0
Aqoxy2G03778 Aquilegia oxysepala HOM05D005505 ORTHO05D006974 3.4e-31 138.3 99 65.7
Haze_11578 Corylus avellana HOM05D005505 ORTHO05D006974 9.8e-31 136.7 86 77.9
Lj3C565G3 Lonicera japonica HOM05D005505 ORTHO05D006974 9.8e-31 136.7 102 67.6
unitig_32.g10868 Utricularia gibba HOM05D005505 ORTHO05D006974 9.8e-31 136.7 99 66.7
Lj3A578G8 Lonicera japonica HOM05D005505 ORTHO05D006974 1.3e-30 136.3 102 67.6
Lj3A579T16 Lonicera japonica HOM05D005505 ORTHO05D006974 2.2e-30 135.6 128 55.5
Nitab4.5_0004881g0030 Nicotiana tabacum HOM05D005505 ORTHO05D006974 4.8e-30 134.4 93 69.9
FAN08G1440 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.7e-28 128.6 95 66.3
CDE02G0375 Ceratophyllum demersum HOM05D005505 ORTHO05D006974 1.7e-27 125.9 100 66.0
Hund05658 Selenicereus undatus HOM05D005505 ORTHO05D006974 5.0e-27 124.4 98 64.3
SEGI_35699 Sequoiadendron giganteum HOM05D005505 ORTHO05D006974 6.5e-27 124.0 101 57.4
Lj3A580T64 Lonicera japonica HOM05D005505 ORTHO05D006974 8.9e-24 113.6 122 51.6
Sp3g21750 Schrenkiella parvula HOM05D005505 ORTHO05D006974 4.4e-23 111.3 63 90.5
Lj3A565G17 Lonicera japonica HOM05D005505 ORTHO05D006974 7.5e-23 110.5 102 56.9
Pp3c26_12110 Physcomitrium patens HOM05D005505 ORTHO05D006974 7.5e-23 110.5 93 55.9
Gohir.D09G197033 Gossypium hirsutum HOM05D005505 ORTHO05D006974 9.8e-23 110.2 122 49.2
Mapoly0028s0013 Marchantia polymorpha HOM05D005505 ORTHO05D006974 7.0e-21 104.0 93 57.0
Lj3A566G16 Lonicera japonica HOM05D005505 ORTHO05D006974 4.5e-20 101.3 77 63.6
Lj3A578G7 Lonicera japonica HOM05D005505 ORTHO05D006974 4.5e-20 101.3 77 63.6
SMO351G0576 Selaginella moellendorffii HOM05D005505 ORTHO05D006974 2.9e-19 98.6 100 51.0
CAN.G220.36 Capsicum annuum HOM05D005505 ORTHO05D006974 3.6e-17 91.7 89 55.1
MD14G1116500 Malus domestica HOM05D005505 ORTHO05D006974 1.0e-16 90.1 59 71.2
CBR_g34017 Chara braunii HOM05D005505 ORTHO05D006974 4.9e-14 81.3 95 43.2
MCO15G051 Micromonas commoda HOM05D005505 ORTHO05D006974 5.4e-13 77.8 94 44.7
PRCOL_00000308 Prasinoderma coloniale HOM05D005505 ORTHO05D006974 2.7e-12 75.5 97 40.2
Cre02.g112850 Chlamydomonas reinhardtii HOM05D005505 ORTHO05D006974 8.6e-11 70.5 92 40.2


User provided reference genes

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