Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 1.8e-145 519.2 264 100.0
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 4.3e-123 444.9 273 83.9
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 9.7e-123 443.7 270 84.4
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 9.7e-123 443.7 270 84.4
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.8e-121 439.5 273 82.8
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 4.1e-121 438.3 273 82.4
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 4.5e-120 434.9 267 85.0
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 1.1e-118 430.3 289 78.5
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 1.9e-110 402.9 273 77.3
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.6e-109 399.8 273 77.3
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 2.5e-102 375.9 273 68.9
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 2.2e-98 362.8 271 67.5
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 6.3e-98 361.3 273 65.6
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 7.0e-97 357.8 271 67.2
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 9.1e-97 357.5 270 64.4
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 3.5e-96 355.5 273 65.2
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 3.5e-96 355.5 277 65.0
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 7.7e-96 354.4 341 57.8
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.7e-95 353.2 273 64.1
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 2.9e-95 352.4 270 63.7
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 2.9e-95 352.4 273 64.5
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 3.8e-95 352.1 270 65.2
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 8.5e-95 350.9 270 64.1
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 1.1e-94 350.5 270 64.8
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 2.5e-94 349.4 270 63.3
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 1.2e-93 347.1 273 61.9
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 2.1e-93 346.3 271 63.5
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 3.6e-93 345.5 270 63.0
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 4.7e-93 345.1 274 64.6
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 4.7e-93 345.1 273 64.8
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 4.7e-93 345.1 273 64.8
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.0e-92 344.0 266 65.4
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 1.8e-92 343.2 270 62.6
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 3.0e-92 342.4 266 65.0
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.2e-91 340.5 266 64.3
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 9.8e-91 337.4 270 61.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 9.8e-91 337.4 273 61.9
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 1.3e-90 337.0 273 61.2
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.7e-90 336.7 268 63.1
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 3.7e-90 335.5 273 61.5
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 4.8e-90 335.1 273 63.0
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 5.4e-89 331.6 270 62.6
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.7e-88 329.3 273 60.1
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 4.5e-88 328.6 270 61.5
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 5.9e-88 328.2 257 63.4
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 1.0e-87 327.4 272 58.8
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.2e-87 326.2 270 61.1
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 2.2e-87 326.2 290 58.3
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.8e-87 325.5 270 61.1
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 3.8e-87 325.5 289 58.5
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 6.5e-87 324.7 266 61.7
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 1.1e-86 323.9 268 61.6
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 4.2e-86 322.0 271 59.0
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 4.2e-86 322.0 277 59.6
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 4.2e-86 322.0 267 58.4
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 5.5e-86 321.6 272 60.7
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 9.4e-86 320.9 269 59.9
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 3.0e-84 315.8 262 61.1
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 5.2e-84 315.1 273 59.0
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 6.8e-84 314.7 267 56.6
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.0e-83 313.2 222 64.9
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 2.6e-83 312.8 273 64.5
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 3.4e-83 312.4 271 58.3
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 1.3e-82 310.5 258 58.1
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 3.7e-82 308.9 255 60.8
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 4.1e-81 305.4 264 58.7
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 1.2e-80 303.9 264 58.0
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.7e-80 302.8 297 54.9
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 1.3e-79 300.4 272 55.1
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 5.0e-79 298.5 274 53.6
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 5.0e-79 298.5 261 55.2
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 6.6e-79 298.1 272 57.0
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 1.5e-78 297.0 280 53.6
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.9e-78 296.6 201 69.2
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 9.5e-78 294.3 241 62.7
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 8.0e-77 291.2 269 53.5
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 8.0e-77 291.2 201 69.2
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 6.8e-76 288.1 274 51.1
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.5e-75 287.0 225 63.6
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.5e-75 287.0 257 58.8
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 2.6e-75 286.2 199 65.3
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 4.4e-75 285.4 299 51.2
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 1.1e-73 280.8 272 54.0
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 1.7e-71 273.5 218 63.3
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 5.0e-71 271.9 290 52.1
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 5.0e-71 271.9 173 71.1
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 3.3e-70 269.2 178 77.0
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 4.3e-70 268.9 290 52.1
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 1.2e-67 260.8 267 49.4
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.9e-66 256.1 224 54.9
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 3.2e-65 252.7 253 50.2
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 4.1e-65 252.3 207 63.8
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 3.3e-62 242.7 257 50.6
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 2.1e-61 240.0 207 55.6
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 2.6e-59 233.0 280 43.2
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 1.4e-57 227.3 261 44.1
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 1.4e-57 227.3 189 60.8
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 3.5e-56 222.6 272 41.5
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.9e-54 216.9 173 60.7
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 4.0e-52 209.1 185 56.2
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 8.4e-50 201.4 188 53.7
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 1.0e-47 194.5 215 43.7
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 4.7e-45 185.7 270 43.0
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 8.7e-39 164.9 120 64.2
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 5.6e-38 162.2 149 55.0
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 8.1e-37 158.3 123 63.4
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 5.3e-36 155.6 100 74.0
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 5.3e-36 155.6 95 78.9
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.4e-33 147.5 185 43.2
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 1.3e-31 141.0 96 72.9
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 5.6e-30 135.6 93 69.9
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 5.6e-30 135.6 92 70.7
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 6.2e-29 132.1 204 38.2
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 2.4e-28 130.2 105 66.7
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 4.9e-26 122.5 107 57.0
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 7.4e-22 108.6 81 60.5
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.8e-21 106.7 171 35.7
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 2.4e-20 103.6 76 63.2
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 3.1e-20 103.2 68 69.1
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 4.5e-19 99.4 95 56.8
BcaB02g09486 Brassica carinata HOM05D006242 ORTHO05D007936 6.5e-18 95.5 78 66.7
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 1.0e-15 88.2 162 32.7
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 6.7e-15 85.5 124 42.7
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-13 80.5 55 65.5
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 7.6e-11 72.0 54 63.0
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 1.9e-09 67.4 103 43.7
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 9.3e-09 65.1 53 60.4
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.7e-08 63.5 52 55.8
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 6.7e-07 58.9 91 38.5
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 7.4e-06 55.5 70 44.3


User provided reference genes

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