Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.8e-162 573.9 289 100.0
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.8e-162 573.9 289 100.0
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 5.8e-137 491.1 265 92.8
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.5e-132 475.7 265 90.2
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 3.3e-132 475.3 265 89.4
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 9.5e-132 473.8 261 91.2
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.6e-131 473.0 265 89.1
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 8.1e-131 470.7 265 90.6
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 3.4e-129 465.3 266 89.8
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 3.4e-129 465.3 266 89.8
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 2.1e-126 456.1 256 89.1
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 7.1e-111 404.4 265 79.2
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 6.0e-110 401.4 253 80.6
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 9.3e-103 377.5 261 73.6
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.0e-93 345.9 257 68.9
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 5.7e-92 341.7 247 70.4
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.3e-91 340.5 257 68.5
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 8.2e-91 337.8 259 68.3
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 2.4e-90 336.3 256 68.0
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 9.0e-90 334.3 248 68.5
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.2e-89 334.0 247 68.4
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-89 334.0 257 68.1
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.5e-89 333.6 247 68.8
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 1.5e-89 333.6 258 65.5
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 2.0e-89 333.2 247 68.0
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.0e-88 330.9 261 65.9
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.0e-88 330.9 245 66.9
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 1.3e-88 330.5 261 64.0
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 8.5e-88 327.8 249 67.9
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.9e-87 326.6 255 65.5
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.9e-87 326.6 245 67.3
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 4.2e-87 325.5 248 66.9
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 4.2e-87 325.5 246 67.1
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 5.5e-87 325.1 252 67.1
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 9.4e-87 324.3 242 67.8
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 1.6e-86 323.6 254 65.4
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 2.7e-86 322.8 255 64.3
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 3.6e-86 322.4 247 67.2
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 3.6e-86 322.4 244 66.8
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 6.1e-86 321.6 254 66.1
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 6.1e-86 321.6 265 62.3
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 1.4e-85 320.5 259 62.9
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.8e-85 320.1 259 63.3
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 3.0e-85 319.3 257 64.2
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.1e-85 318.5 260 62.3
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 6.7e-85 318.2 237 68.4
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.5e-84 316.2 245 65.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 3.3e-84 315.8 248 64.9
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.3e-83 313.9 246 64.6
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.7e-83 313.5 251 61.8
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.2e-83 313.2 280 61.8
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 3.7e-83 312.4 245 64.9
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 6.3e-83 311.6 258 60.1
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 1.1e-82 310.8 240 66.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.1e-82 310.8 245 64.1
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 1.4e-82 310.5 258 64.3
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 2.4e-82 309.7 259 62.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 6.9e-82 308.1 251 62.9
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 6.9e-82 308.1 256 60.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 6.9e-82 308.1 259 60.2
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 6.9e-82 308.1 259 63.3
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 4.5e-81 305.4 248 65.3
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 4.5e-81 305.4 312 53.5
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 1.0e-80 304.3 239 65.7
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.3e-80 303.9 258 60.9
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.7e-80 303.5 259 62.5
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 5.0e-80 302.0 245 64.5
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 8.5e-80 301.2 256 60.9
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 8.5e-80 301.2 257 59.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 8.5e-80 301.2 255 62.0
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.1e-79 300.8 245 64.5
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.1e-78 296.6 256 62.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.6e-78 295.8 273 58.2
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 3.6e-78 295.8 257 58.8
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 3.6e-78 295.8 240 63.8
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 6.1e-78 295.0 256 58.2
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 6.1e-78 295.0 273 57.1
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.0e-77 294.3 256 61.3
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 1.0e-77 294.3 272 57.0
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 1.0e-77 294.3 279 57.3
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.4e-77 293.9 257 59.1
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.8e-77 293.5 261 60.5
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 2.3e-77 293.1 260 59.6
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 3.0e-77 292.7 246 63.4
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 5.1e-77 292.0 257 58.8
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 8.8e-77 291.2 240 64.2
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.6e-76 289.7 279 56.6
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 3.3e-76 289.3 259 59.8
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 7.4e-76 288.1 226 65.9
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.4e-74 283.1 253 56.5
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 1.2e-73 280.8 256 59.4
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.4e-71 273.9 222 66.2
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.5e-71 273.1 299 50.5
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 9.4e-71 271.2 271 52.4
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 3.9e-69 265.8 255 60.0
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 8.5e-64 248.1 193 65.8
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 3.7e-59 232.6 184 67.4
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 5.3e-58 228.8 133 89.5
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 7.0e-58 228.4 249 51.4
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 2.8e-51 206.5 131 74.0
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.8e-51 206.5 261 43.7
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 3.1e-50 203.0 227 48.9
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 5.4e-50 202.2 273 42.9
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.7e-43 180.6 263 43.7
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 3.2e-42 176.4 121 69.4
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 7.8e-41 171.8 189 45.5
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.2e-38 164.5 245 44.5
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.5e-36 157.5 247 40.9
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 1.1e-31 141.4 120 58.3
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.2e-21 105.9 151 43.0
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 6.4e-19 99.0 139 36.7
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.6e-17 94.4 114 45.6
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.3e-16 91.3 111 53.2
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.7e-09 67.0 38 84.2
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.8e-09 65.5 46 63.0
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.6e-07 59.3 39 64.1


User provided reference genes

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