Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 8.3e-47 189.9 87 100.0
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 8.3e-47 189.9 87 100.0
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 8.3e-47 189.9 87 100.0
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.1e-46 189.5 86 100.0
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-46 188.3 87 98.9
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-46 188.3 87 98.9
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 2.4e-46 188.3 86 98.8
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 2.4e-46 188.3 87 98.9
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 2.4e-46 188.3 86 98.8
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 2.4e-46 188.3 86 98.8
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 2.4e-46 188.3 87 98.9
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 5.4e-46 187.2 86 98.8
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 7.0e-46 186.8 87 97.7
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 7.0e-46 186.8 87 96.6
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 3.5e-45 184.5 86 96.5
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 2.5e-43 178.3 86 94.2
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 2.3e-41 171.8 88 89.8
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 4.0e-41 171.0 88 88.6
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 1.5e-40 169.1 88 87.5
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 2.0e-40 168.7 88 86.4
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 2.0e-40 168.7 88 88.6
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 2.0e-40 168.7 88 88.6
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 2.0e-40 168.7 88 90.9
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 2.6e-40 168.3 88 87.5
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 4.4e-40 167.5 88 86.4
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 4.4e-40 167.5 88 86.4
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 4.4e-40 167.5 88 87.5
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 4.4e-40 167.5 87 87.4
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 5.8e-40 167.2 88 85.2
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 5.8e-40 167.2 88 85.2
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 5.8e-40 167.2 88 85.2
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 5.8e-40 167.2 88 86.4
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 7.5e-40 166.8 85 90.6
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 7.5e-40 166.8 85 90.6
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 7.5e-40 166.8 85 90.6
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 7.5e-40 166.8 85 90.6
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.3e-39 166.0 88 85.2
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 6.4e-39 163.7 88 85.2
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 8.3e-39 163.3 88 85.2
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 1.1e-38 162.9 88 84.1
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 1.4e-38 162.5 87 88.5
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 1.9e-38 162.2 88 84.1
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 1.9e-38 162.2 85 85.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.9e-38 162.2 88 81.8
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 2.4e-38 161.8 82 87.8
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 3.2e-38 161.4 87 81.6
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 4.1e-38 161.0 88 84.1
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 4.1e-38 161.0 88 88.6
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 4.1e-38 161.0 90 85.6
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 5.4e-38 160.6 83 90.4
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 9.2e-38 159.8 85 84.7
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.2e-37 159.5 83 88.0
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 1.2e-37 159.5 83 89.2
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 1.6e-37 159.1 88 84.1
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 2.0e-37 158.7 88 87.5
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 2.0e-37 158.7 87 86.2
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 2.0e-37 158.7 82 87.8
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 2.0e-37 158.7 88 81.8
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 2.7e-37 158.3 84 85.7
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.7e-37 158.3 88 87.5
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 3.5e-37 157.9 85 84.7
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 3.5e-37 157.9 85 83.5
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.6e-37 157.5 87 81.6
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 4.6e-37 157.5 88 84.1
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 4.6e-37 157.5 88 84.1
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 6.0e-37 157.1 82 82.9
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 1.0e-36 156.4 84 86.9
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 1.0e-36 156.4 84 86.9
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.3e-36 156.0 85 83.5
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 2.3e-36 155.2 88 83.0
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 3.0e-36 154.8 81 87.7
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 3.0e-36 154.8 82 84.1
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.9e-36 154.5 86 80.2
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 5.0e-36 154.1 88 80.7
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 5.0e-36 154.1 88 80.7
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 8.6e-36 153.3 82 82.9
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 1.5e-35 152.5 83 83.1
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 1.9e-35 152.1 84 84.5
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 2.5e-35 151.8 83 83.1
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 5.6e-35 150.6 84 82.1
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 9.5e-35 149.8 86 81.4
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 9.5e-35 149.8 87 79.3
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 1.2e-34 149.4 83 81.9
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 1.6e-34 149.1 88 83.0
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 1.6e-34 149.1 89 80.9
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.8e-34 148.3 88 79.5
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 3.6e-34 147.9 77 84.4
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 4.7e-34 147.5 87 77.0
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 6.2e-34 147.1 82 79.3
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 6.2e-34 147.1 88 80.7
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 1.1e-33 146.4 85 81.2
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 8.9e-33 143.3 87 79.3
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.0e-32 142.1 87 78.2
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 9.8e-32 139.8 88 77.3
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 1.3e-31 139.4 109 65.1
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 1.1e-30 136.3 78 78.2
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.9e-30 135.6 87 75.9
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 3.3e-27 124.8 65 89.2
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 9.5e-27 123.2 68 79.4
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 3.6e-26 121.3 64 85.9
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 8.1e-26 120.2 62 83.9
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 8.9e-25 116.7 61 85.2
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 5.8e-24 114.0 61 82.0
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 1.9e-19 99.0 50 88.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.1e-18 95.5 57 73.7
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 3.1e-17 91.7 63 58.7
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 3.8e-15 84.7 58 63.8
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 4.9e-15 84.3 41 92.7
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 1.7e-12 75.9 61 57.4
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 3.9e-12 74.7 38 86.8
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.9e-11 72.4 40 80.0
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 2.5e-11 72.0 41 80.5
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.8e-10 67.8 40 72.5


User provided reference genes

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