Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g19740 Schrenkiella parvula HOM05D001765 ORTHO05D005876 7.8e-83 311.2 167 100.0
SpUn0021_0110 Schrenkiella parvula HOM05D001765 ORTHO05D005876 7.8e-83 311.2 167 100.0
CARHR182130 Cardamine hirsuta HOM05D001765 ORTHO05D005876 1.8e-71 273.5 171 88.9
Thhalv10004753m.g Eutrema salsugineum HOM05D001765 ORTHO05D005876 6.9e-71 271.6 165 91.5
BraA06t26751Z Brassica rapa HOM05D001765 ORTHO05D005876 2.6e-70 269.6 168 89.3
A06p38370 Brassica napus HOM05D001765 ORTHO05D005876 5.8e-70 268.5 168 88.7
BcaC06g30699 Brassica carinata HOM05D001765 ORTHO05D005876 1.3e-69 267.3 170 87.6
Carub.0008s0928 Capsella rubella HOM05D001765 ORTHO05D005876 4.9e-69 265.4 168 86.9
BolC7t44518H Brassica oleracea HOM05D001765 ORTHO05D005876 1.9e-68 263.5 160 90.0
BcaNung02601 Brassica carinata HOM05D001765 ORTHO05D005876 9.3e-68 261.2 160 89.4
C07p39890 Brassica napus HOM05D001765 ORTHO05D005876 9.3e-68 261.2 160 89.4
AL8G23110 Arabidopsis lyrata HOM05D001765 ORTHO05D005876 8.7e-66 254.6 166 86.1
AT5G49400 Arabidopsis thaliana HOM05D001765 ORTHO05D005876 5.6e-65 251.9 163 85.3
A02p38130 Brassica napus HOM05D001765 ORTHO05D003527 2.8e-64 249.6 158 87.3
Aa31LG11G7990 Aethionema arabicum HOM05D001765 ORTHO05D005876 3.7e-64 249.2 166 84.9
BcaC03g17719 Brassica carinata HOM05D001765 ORTHO05D005876 4.8e-64 248.8 157 88.5
C02p57300 Brassica napus HOM05D001765 ORTHO05D003527 4.8e-64 248.8 157 88.5
BolC2t11799H Brassica oleracea HOM05D001765 ORTHO05D003527 4.8e-64 248.8 157 88.5
BcaB07g34154 Brassica carinata HOM05D001765 ORTHO05D005876 1.6e-59 233.8 171 81.3
BraA02t08788Z Brassica rapa HOM05D001765 ORTHO05D005876 3.5e-59 232.6 158 84.8
THA.LOC104802705 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 3.3e-57 226.1 164 80.5
THA.LOC104818892 Tarenaya hassleriana HOM05D001765 ORTHO05D005876 9.6e-57 224.6 158 81.0
CANSAT78G1829 Cannabis sativa HOM05D001765 ORTHO05D005876 2.8e-56 223.0 151 83.4
COL.COLO4_11257 Corchorus olitorius HOM05D001765 ORTHO05D005876 2.4e-55 219.9 167 76.6
Gorai.006G079200 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.4e-55 219.9 155 81.3
Gohir.A09G065500 Gossypium hirsutum HOM05D001765 ORTHO05D005876 3.1e-55 219.5 155 81.3
Gohir.D09G064400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 4.0e-55 219.2 155 81.3
FvH4_4g19461 Fragaria vesca HOM05D001765 ORTHO05D005876 1.2e-54 217.6 153 81.7
CiPaw.02G075900 Carya illinoinensis HOM05D001765 ORTHO05D005876 2.0e-54 216.9 151 82.1
Duzib052G0074 Durio zibethinus HOM05D001765 ORTHO05D005876 2.6e-54 216.5 155 80.6
Gorai.011G199400 Gossypium raimondii HOM05D001765 ORTHO05D005876 2.6e-54 216.5 147 83.7
TPR.G16856 Trifolium pratense HOM05D001765 ORTHO05D005876 3.4e-54 216.1 144 83.3
TAR365G0409 Trochodendron aralioides HOM05D001765 ORTHO05D005876 3.4e-54 216.1 147 80.3
CiPaw.01G139800 Carya illinoinensis HOM05D001765 ORTHO05D005876 4.5e-54 215.7 165 73.9
MD16G1157200 Malus domestica HOM05D001765 ORTHO05D005876 4.5e-54 215.7 151 80.8
Gohir.A10G171300 Gossypium hirsutum HOM05D001765 ORTHO05D005876 5.8e-54 215.3 153 81.0
Nn3g21679 Nelumbo nucifera HOM05D001765 ORTHO05D005876 5.8e-54 215.3 168 73.8
Prupe.1G122100 Prunus persica HOM05D001765 ORTHO05D005876 5.8e-54 215.3 151 80.8
QL06p011625 Quercus lobata HOM05D001765 ORTHO05D005876 5.8e-54 215.3 151 80.8
Cpa.g.sc9.87 Carica papaya HOM05D001765 ORTHO05D005876 7.6e-54 214.9 165 75.2
FAN07G0091 Fragaria x ananassa HOM05D001765 ORTHO05D005876 7.6e-54 214.9 153 80.4
TAR633G2429 Trochodendron aralioides HOM05D001765 ORTHO05D005876 7.6e-54 214.9 147 80.3
ClCG06G004640 Citrullus lanatus HOM05D001765 ORTHO05D005876 1.0e-53 214.5 151 79.5
MD13G1156300 Malus domestica HOM05D001765 ORTHO05D005876 1.3e-53 214.2 151 80.8
Prupe.1G073200 Prunus persica HOM05D001765 ORTHO05D005876 1.3e-53 214.2 152 80.9
Thecc.04G297600 Theobroma cacao HOM05D001765 ORTHO05D005876 1.3e-53 214.2 154 80.5
CsaV3_2G015100 Cucumis sativus L. HOM05D001765 ORTHO05D005876 1.7e-53 213.8 136 84.6
Ca_21450_v3 Cicer arietinum L. HOM05D001765 ORTHO05D005876 2.2e-53 213.4 164 74.4
Ciclev10005673m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.2e-53 213.4 154 80.5
Haze_01276 Corylus avellana HOM05D001765 ORTHO05D005876 2.2e-53 213.4 154 79.2
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 2.2e-53 213.4 154 79.2
Duzib151G0385 Durio zibethinus HOM05D001765 ORTHO05D005876 2.2e-53 213.4 147 82.3
Gohir.D10G178400 Gossypium hirsutum HOM05D001765 ORTHO05D005876 2.2e-53 213.4 147 83.0
Atru.chr4.3029 Acer truncatum HOM05D001765 ORTHO05D005876 2.9e-53 213.0 153 77.8
CDE12G0657 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 2.9e-53 213.0 159 76.1
Ciclev10016311m.g Citrus clementina HOM05D001765 ORTHO05D005876 2.9e-53 213.0 135 85.2
MBI19_g07244_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 2.9e-53 213.0 163 75.5
ATR0706G059 Amborella trichopoda HOM05D001765 ORTHO05D005876 3.8e-53 212.6 148 80.4
AUR62004747 Chenopodium quinoa HOM05D001765 ORTHO05D005876 4.9e-53 212.2 143 82.5
COL.COLO4_34649 Corchorus olitorius HOM05D001765 ORTHO05D005123 4.9e-53 212.2 168 74.4
Glyma.17G032500 Glycine max HOM05D001765 ORTHO05D005876 6.5e-53 211.8 155 77.4
Nn4g25612 Nelumbo nucifera HOM05D001765 ORTHO05D005876 6.5e-53 211.8 147 79.6
RcHm_v2.0_Chr4g0424571 Rosa chinensis HOM05D001765 ORTHO05D005876 8.4e-53 211.5 134 86.6
Potri.010G142400 Populus trichocarpa HOM05D001765 ORTHO05D005876 1.1e-52 211.1 149 79.2
MELO3C023334.2 Cucumis melo HOM05D001765 ORTHO05D005876 2.5e-52 209.9 135 83.7
Glyma.07G241300 Glycine max HOM05D001765 ORTHO05D005876 2.5e-52 209.9 155 76.8
Oeu063485.1 Olea europaea HOM05D001765 ORTHO05D005876 2.5e-52 209.9 169 74.0
AUR62037504 Chenopodium quinoa HOM05D001765 ORTHO05D005876 3.2e-52 209.5 158 76.6
Sed0022335 Sechium edule HOM05D001765 ORTHO05D005876 3.2e-52 209.5 147 78.9
arahy.Tifrunner.gnm1.ann1.03CYAA Arachis hypogaea HOM05D001765 ORTHO05D005876 4.2e-52 209.1 135 83.0
TWI09G0718 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 4.2e-52 209.1 153 78.4
PSO210G5285 Papaver somniferum HOM05D001765 ORTHO05D005876 5.5e-52 208.8 168 72.0
TWI73G0761 Tripterygium wilfordii HOM05D001765 ORTHO05D005876 5.5e-52 208.8 153 77.8
Actinidia40362 Actinidia chinensis HOM05D001765 ORTHO05D005876 9.3e-52 208.0 148 81.8
Dinv44303 Davidia involucrata HOM05D001765 ORTHO05D005876 9.3e-52 208.0 147 81.0
Migut.N00048 Erythranthe guttata HOM05D001765 ORTHO05D005876 9.3e-52 208.0 136 84.6
Cc03_g00980 Coffea canephora HOM05D001765 ORTHO05D005876 1.2e-51 207.6 147 79.6
unitig_749.g13366 Utricularia gibba HOM05D001765 ORTHO05D005876 1.2e-51 207.6 148 80.4
EL10Ac4g08905 Beta vulgaris HOM05D001765 ORTHO05D005876 1.6e-51 207.2 168 72.0
Lalb_Chr13g0298421 Lupinus albus HOM05D001765 ORTHO05D005876 1.6e-51 207.2 158 75.9
Peaxi162Scf00065g00002 Petunia axillaris HOM05D001765 ORTHO05D005876 2.1e-51 206.8 153 78.4
Psat4g024600 Pisum sativum HOM05D001765 ORTHO05D005876 2.1e-51 206.8 145 78.6
Hma1.2p1_0078F.1_g040010 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 2.7e-51 206.5 151 78.8
Oeu001465.1 Olea europaea HOM05D001765 ORTHO05D005876 2.7e-51 206.5 148 78.4
Potri.008G107100 Populus trichocarpa HOM05D001765 ORTHO05D005876 2.7e-51 206.5 149 77.2
Sabra10G0110100 Salix brachista HOM05D001765 ORTHO05D005876 2.7e-51 206.5 151 77.5
VMungo1215G2482 Vigna mungo HOM05D001765 ORTHO05D005876 2.7e-51 206.5 162 72.8
Phvul.003G112500 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.5e-51 206.1 154 77.3
Phvul.008G245800 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.5e-51 206.1 154 77.3
Phvul.009G074533 Phaseolus vulgaris HOM05D001765 ORTHO05D005876 3.5e-51 206.1 154 77.3
Sabra08G0081000 Salix brachista HOM05D001765 ORTHO05D005876 3.5e-51 206.1 150 76.0
SGA_v2.0_scaffold119G32663 Striga asiatica HOM05D001765 ORTHO05D005876 3.5e-51 206.1 167 73.7
Lj6P689T37 Lonicera japonica HOM05D001765 ORTHO05D005876 4.6e-51 205.7 158 74.7
vmacro08062 Vaccinium macrocarpon HOM05D001765 ORTHO05D005876 4.6e-51 205.7 152 77.6
PGR031G3587 Punica granatum HOM05D001765 ORTHO05D005876 6.0e-51 205.3 135 82.2
VMungo0647G0513 Vigna mungo HOM05D000091 ORTHO05D005533 6.0e-51 205.3 143 80.4
Lalb_Chr07g0182091 Lupinus albus HOM05D001765 ORTHO05D005876 7.9e-51 204.9 154 76.0
PSO761G0153 Papaver somniferum HOM05D001765 ORTHO05D005876 7.9e-51 204.9 152 76.3
Sc13g0006420 Simmondsia chinensis HOM05D001765 ORTHO05D005876 7.9e-51 204.9 167 71.3
CSS0002630 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.0e-50 204.5 167 73.1
CSS0034555 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D005876 1.0e-50 204.5 147 79.6
CAN.G874.72 Capsicum annuum HOM05D001765 ORTHO05D005876 1.0e-50 204.5 154 76.0
MSTRG.21776 Avicennia marina HOM05D001765 ORTHO05D005876 1.8e-50 203.8 140 81.4
Hma1.2p1_0013F.1_g008730 Hydrangea macrophylla HOM05D001765 ORTHO05D005876 1.8e-50 203.8 150 78.0
Manes.03G202700 Manihot esculenta HOM05D001765 ORTHO05D005876 2.3e-50 203.4 157 73.9
Nitab4.5_0000456g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.3e-50 203.4 166 73.5
Ah.04g162900 Amaranthus hybridus HOM05D001765 ORTHO05D005876 3.0e-50 203.0 163 72.4
SEGI_21194 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.9e-50 202.6 161 73.3
SEGI_31674 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.9e-50 202.6 161 73.3
Aqoxy1G02157 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 5.1e-50 202.2 157 73.2
DCAR_002506 Daucus carota HOM05D001765 ORTHO05D005876 5.1e-50 202.2 168 72.0
Nitab4.5_0000276g0120 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.5e-49 200.7 166 72.9
Sed0021764 Sechium edule HOM05D001765 ORTHO05D005876 1.5e-49 200.7 132 83.3
Nitab4.5_0004323g0040 Nicotiana tabacum HOM05D001765 ORTHO05D005876 1.9e-49 200.3 166 72.3
Solyc01g060030.3 Solanum lycopersicum HOM05D001765 ORTHO05D005876 2.5e-49 199.9 150 76.0
Sopen01g026230 Solanum pennellii HOM05D001765 ORTHO05D005876 2.5e-49 199.9 150 76.0
Aqoxy5G01535 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 9.7e-49 198.0 157 72.6
Lj4g0023600 Lotus japonicus HOM05D001765 ORTHO05D005876 1.3e-48 197.6 138 78.3
Nitab4.5_0010629g0030 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.8e-48 196.4 150 74.7
Rhsim04G0234200 Rhododendron simsii HOM05D001765 ORTHO05D005876 3.7e-48 196.1 147 76.9
Eucgr.A00351 Eucalyptus grandis HOM05D001765 ORTHO05D005876 6.3e-48 195.3 166 68.7
Pp3c14_13970 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.1e-47 194.5 140 79.3
ECA246G2338 Erigeron canadensis HOM05D001765 ORTHO05D005876 1.8e-47 193.7 154 72.7
HanXRQChr05g0145931 Helianthus annuus HOM05D001765 ORTHO05D005876 1.8e-47 193.7 159 73.0
Aqoxy5G02976 Aquilegia oxysepala HOM05D001765 ORTHO05D005876 6.9e-47 191.8 147 74.8
Lsat_1_v5_gn_6_116901 Lactuca sativa HOM05D001765 ORTHO05D005876 1.5e-46 190.7 165 68.5
Mapoly0023s0038 Marchantia polymorpha HOM05D001765 ORTHO05D005876 3.4e-46 189.5 145 75.9
CDE01G0626 Ceratophyllum demersum HOM05D001765 ORTHO05D005876 1.0e-45 188.0 168 67.3
Zm00001eb109890 Zea mays HOM05D001765 ORTHO05D005876 1.7e-45 187.2 129 78.3
Os11g0199600 Oryza sativa ssp. japonica HOM05D001765 ORTHO05D005876 5.0e-45 185.7 129 77.5
AagrBONN_evm.TU.Sc2ySwM_362.810 Anthoceros agrestis HOM05D001765 ORTHO05D005876 6.5e-45 185.3 160 70.0
Zm00001eb328920 Zea mays HOM05D001765 ORTHO05D005876 1.4e-44 184.1 129 77.5
Pp3c14_17690 Physcomitrium patens HOM05D001765 ORTHO05D005876 1.5e-41 174.1 130 70.8
Mapoly0171s0012 Marchantia polymorpha HOM05D001765 ORTHO05D005876 2.8e-40 169.9 164 59.1
Manes.15G005450 Manihot esculenta HOM05D001765 ORTHO05D005876 7.7e-38 161.8 146 63.7
Nitab4.5_0004323g0070 Nicotiana tabacum HOM05D001765 ORTHO05D005876 2.9e-37 159.8 116 76.7
AagrBONN_evm.TU.Sc2ySwM_228.5656 Anthoceros agrestis HOM05D001765 ORTHO05D005876 1.4e-36 157.5 122 76.2
CBR_g53494 Chara braunii HOM05D000188 ORTHO05D005876 2.8e-32 143.3 152 57.9
SMO340G0272 Selaginella moellendorffii HOM05D001765 ORTHO05D005876 4.8e-32 142.5 110 68.2
Zm00001eb091100 Zea mays HOM05D001765 ORTHO05D005876 2.6e-30 136.7 127 59.8
Zm00001eb276930 Zea mays HOM05D001765 ORTHO05D005876 4.5e-30 136.0 108 69.4
MBI19_g17409_MAGBIO Magnolia biondii HOM05D001765 ORTHO05D005876 1.0e-29 134.8 167 56.9
GSVIVG01035017001 Vitis vinifera HOM05D001765 ORTHO05D005876 8.5e-29 131.7 82 91.5
SEGI_08255 Sequoiadendron giganteum HOM05D001765 ORTHO05D005876 3.9e-26 122.9 115 64.3
HanXRQChr13g0395311 Helianthus annuus HOM05D001765 ORTHO05D005876 2.8e-24 116.7 110 60.0
Lsat_1_v5_gn_6_18261 Lactuca sativa HOM05D001765 ORTHO05D005876 7.7e-22 108.6 150 48.7
ECA233G0063 Erigeron canadensis HOM05D001765 ORTHO05D005876 5.0e-21 105.9 102 59.8
Medtr1g032030 Medicago truncatula HOM05D001765 ORTHO05D005876 3.2e-20 103.2 67 88.1
Medtr1g032370 Medicago truncatula HOM05D001765 ORTHO05D005876 3.2e-20 103.2 67 88.1
Zm00001eb408400 Zea mays HOM05D001765 ORTHO05D005876 5.5e-20 102.4 86 70.9
ATR1159G054 Amborella trichopoda HOM05D001765 ORTHO05D005876 7.5e-17 92.0 83 60.2
CAN.G201.7 Capsicum annuum HOM05D001765 ORTHO05D005876 9.7e-17 91.7 147 49.0
CAN.G197.3 Capsicum annuum HOM05D001765 ORTHO05D005876 2.2e-16 90.5 72 72.2
ATR1159G071 Amborella trichopoda HOM05D001765 ORTHO05D005876 4.8e-16 89.4 66 81.8
ATR1159G066 Amborella trichopoda HOM05D001765 ORTHO05D005876 5.3e-15 85.9 64 79.7
Cre12.g529200 Chlamydomonas reinhardtii HOM05D001765 ORTHO05D005876 4.5e-06 56.2 66 43.9


User provided reference genes

Program Settings