Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.0e-51 206.5 105 100.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.0e-51 206.5 105 100.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 1.9e-50 202.2 105 96.2
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 4.1e-48 194.5 106 95.3
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.2e-47 193.0 106 94.3
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 2.0e-47 192.2 106 94.3
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 7.7e-47 190.3 106 93.4
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 2.9e-46 188.3 105 94.3
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 6.5e-46 187.2 105 93.3
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.9e-45 185.7 105 92.4
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 1.9e-45 185.7 105 92.4
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.9e-45 185.7 105 92.4
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 2.5e-45 185.3 105 92.4
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 3.6e-44 181.4 105 90.5
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 7.9e-44 180.3 101 93.1
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 3.9e-43 177.9 105 88.6
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.6e-36 156.0 99 82.8
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 1.8e-32 142.5 107 78.5
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 7.0e-32 140.6 107 73.8
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.2e-31 139.8 103 70.9
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 5.9e-31 137.5 104 70.2
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.3e-30 136.3 103 71.8
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 2.2e-30 135.6 103 70.9
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 5.0e-30 134.4 100 68.0
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 8.5e-30 133.7 98 71.4
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.5e-29 132.9 100 67.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 2.5e-29 132.1 103 65.0
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 4.2e-29 131.3 103 66.0
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.4e-29 130.2 103 66.0
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.4e-29 130.2 103 66.0
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.4e-29 130.2 103 66.0
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 1.2e-28 129.8 104 66.3
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.2e-28 129.8 103 67.0
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 3.6e-28 128.3 103 64.1
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 4.7e-28 127.9 103 68.9
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.4e-27 126.3 103 66.0
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.4e-27 126.3 103 67.0
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 1.8e-27 125.9 104 66.3
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 2.3e-27 125.6 103 65.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 3.0e-27 125.2 104 67.3
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 4.0e-27 124.8 103 64.1
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 5.2e-27 124.4 103 66.0
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 6.7e-27 124.0 104 66.3
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 6.7e-27 124.0 103 64.1
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 8.8e-27 123.6 103 65.0
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 8.8e-27 123.6 103 64.1
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 8.8e-27 123.6 102 67.6
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 1.1e-26 123.2 103 62.1
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.1e-26 123.2 104 64.4
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 3.3e-26 121.7 100 63.0
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 3.3e-26 121.7 103 65.0
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 7.5e-26 120.6 103 64.1
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 7.5e-26 120.6 100 63.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.2e-25 119.0 103 62.1
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 2.2e-25 119.0 99 64.6
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 2.2e-25 119.0 107 60.7
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 2.2e-25 119.0 101 65.3
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 2.2e-25 119.0 98 65.3
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 2.2e-25 119.0 103 63.1
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 2.2e-25 119.0 104 62.5
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 2.8e-25 118.6 100 62.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 3.7e-25 118.2 107 60.7
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 4.8e-25 117.9 103 62.1
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 6.3e-25 117.5 100 61.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 6.3e-25 117.5 103 62.1
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.1e-24 116.7 104 61.5
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.8e-24 115.9 103 59.2
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 2.4e-24 115.5 103 62.1
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 2.4e-24 115.5 103 62.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.1e-24 115.2 100 60.0
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 5.3e-24 114.4 104 59.6
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 5.3e-24 114.4 100 63.0
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 1.6e-23 112.8 103 59.2
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 1.6e-23 112.8 100 66.0
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 2.0e-23 112.5 93 65.6
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 4.5e-23 111.3 91 62.6
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 5.9e-23 110.9 97 62.9
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 5.9e-23 110.9 103 63.1
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 1.3e-22 109.8 103 61.2
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.7e-22 109.4 104 61.5
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 1.7e-22 109.4 106 55.7
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 2.2e-22 109.0 106 57.5
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 2.2e-22 109.0 104 64.4
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 2.2e-22 109.0 100 62.0
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.9e-21 105.9 83 72.3
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 3.2e-21 105.1 103 60.2
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 4.2e-21 104.8 105 56.2
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 7.2e-21 104.0 97 59.8
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 9.4e-21 103.6 94 60.6
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 2.7e-20 102.1 97 58.8
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 3.6e-20 101.7 103 58.3
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 6.1e-20 100.9 100 57.0
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 4.1e-16 88.2 106 51.9
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 3.5e-15 85.1 94 54.3
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 1.0e-14 83.6 86 55.8
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 1.1e-13 80.1 88 54.5
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.2e-12 76.6 65 64.6
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.8e-11 72.8 65 63.1
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 2.0e-10 69.3 97 45.4
Mapoly0047s0010 Marchantia polymorpha HOM05D026638 ORTHO05D030127 7.7e-07 57.4 118 37.3
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 8.6e-06 53.9 105 35.2


User provided reference genes

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