Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-142 509.6 257 100.0
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-142 509.6 257 100.0
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.4e-142 509.6 257 100.0
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 3.0e-129 465.3 258 91.1
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 8.0e-122 440.7 263 87.5
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 2.6e-120 435.6 255 87.8
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.7e-119 433.0 255 88.2
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.7e-119 433.0 255 88.2
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 3.7e-119 431.8 255 87.1
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 4.8e-119 431.4 255 85.9
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 6.3e-119 431.0 256 87.5
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 5.3e-118 427.9 259 85.7
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 7.0e-118 427.6 259 85.7
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.6e-117 426.4 251 87.3
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 8.9e-97 357.5 260 73.5
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 3.7e-95 352.1 265 72.5
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 4.1e-78 295.4 256 61.3
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 6.8e-73 278.1 258 58.9
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 2.0e-72 276.6 250 60.4
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 3.5e-69 265.8 235 59.1
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.5e-69 265.8 254 58.7
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.5e-69 265.8 254 58.7
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.0e-68 262.7 251 58.6
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 9.6e-67 257.7 251 57.0
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.6e-66 256.9 259 56.8
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 3.6e-66 255.8 259 56.0
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 8.1e-66 254.6 262 55.3
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 5.8e-64 248.4 258 54.3
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.9e-63 245.4 268 53.4
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.2e-61 240.7 267 51.3
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 4.6e-61 238.8 262 53.1
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 6.0e-61 238.4 220 58.2
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 7.8e-61 238.0 221 57.9
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 7.8e-61 238.0 221 57.9
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 7.8e-61 238.0 241 51.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.1e-59 234.2 222 56.8
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 1.5e-59 233.8 218 55.5
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 3.3e-59 232.6 267 51.7
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 4.3e-59 232.3 230 53.5
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.6e-59 231.9 211 59.2
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 7.3e-59 231.5 242 52.1
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.6e-58 230.3 253 51.8
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.8e-58 229.6 237 52.7
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 3.6e-58 229.2 260 50.4
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 1.4e-57 227.3 233 53.2
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 2.4e-57 226.5 248 52.0
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 4.0e-57 225.7 232 53.4
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 4.0e-57 225.7 258 50.4
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 1.2e-56 224.2 231 51.5
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 3.4e-56 222.6 233 51.9
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 9.9e-56 221.1 243 52.3
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 3.8e-55 219.2 251 48.2
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 1.1e-54 217.6 234 51.7
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 1.9e-54 216.9 283 45.6
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 1.0e-52 211.1 269 45.0
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 2.3e-52 209.9 235 51.9
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.9e-52 209.1 244 48.4
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.9e-51 206.8 158 66.5
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 7.4e-51 204.9 243 47.3
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 5.3e-49 198.7 215 51.2
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.0e-48 196.8 215 50.7
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 4.5e-48 195.7 214 51.4
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 5.8e-48 195.3 236 46.6
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 9.9e-48 194.5 248 45.6
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 2.2e-47 193.4 225 47.1
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 3.8e-47 192.6 215 52.1
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.4e-46 190.7 175 56.6
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.9e-46 190.3 240 47.9
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.2e-45 187.6 153 62.1
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 1.5e-43 180.6 172 54.7
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 1.5e-43 180.6 172 54.7
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.5e-43 179.9 225 45.3
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 4.3e-43 179.1 218 47.2
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 5.6e-43 178.7 230 40.4
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 9.6e-43 177.9 252 45.6
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 4.8e-42 175.6 228 40.8
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 6.2e-42 175.3 246 41.9
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 1.4e-41 174.1 208 49.0
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.4e-41 173.3 239 42.7
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.2e-40 171.0 249 38.6
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 3.4e-40 169.5 228 42.5
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 5.8e-40 168.7 167 52.7
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 2.9e-39 166.4 169 54.4
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 6.5e-39 165.2 138 57.2
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 8.4e-39 164.9 149 57.0
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.1e-38 164.5 183 49.7
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 2.5e-38 163.3 138 57.2
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.5e-38 163.3 151 53.6
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 5.5e-38 162.2 153 52.9
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 9.3e-38 161.4 151 53.0
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.1e-37 160.2 164 52.4
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 1.8e-36 157.1 137 59.9
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 2.3e-36 156.8 151 54.3
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 5.1e-36 155.6 141 53.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.7e-36 155.2 142 58.5
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 1.1e-35 154.5 182 50.0
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.9e-35 153.7 212 43.4
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 4.3e-35 152.5 156 51.9
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 7.4e-35 151.8 142 56.3
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 7.4e-35 151.8 152 51.3
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.6e-34 150.6 142 56.3
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 2.8e-34 149.8 130 56.9
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 8.2e-34 148.3 142 54.2
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 1.1e-33 147.9 223 39.9
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.5e-32 144.1 142 52.1
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.5e-32 144.1 139 53.2
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 5.0e-31 139.0 203 42.4
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 8.5e-31 138.3 151 49.0
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 2.5e-30 136.7 146 48.6
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.6e-29 132.9 149 45.6
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 4.3e-27 125.9 235 35.3
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.1e-25 121.3 234 35.0
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 2.4e-25 120.2 90 62.2
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 1.7e-23 114.0 155 40.6
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 1.2e-21 107.8 78 60.3
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 2.6e-19 100.1 79 63.3
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 7.7e-16 88.6 64 65.6
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.1e-11 74.7 77 44.2
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 3.7e-10 69.7 143 29.4
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 1.8e-09 67.4 86 38.4
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 8.5e-07 58.5 67 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 4.2e-06 56.2 64 39.1


User provided reference genes

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