Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.1e-284 982.6 495 100.0
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 5.1e-266 920.6 492 93.5
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 2.6e-262 908.3 493 91.7
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 7.6e-262 906.7 493 91.9
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.1e-257 892.9 493 90.9
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 3.3e-257 891.3 493 90.5
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 4.3e-257 891.0 495 90.3
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 1.2e-256 889.4 492 91.3
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 6.2e-256 887.1 487 91.2
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 6.2e-256 887.1 495 90.5
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 3.1e-255 884.8 493 89.7
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 5.2e-255 884.0 495 89.5
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 6.8e-255 883.6 493 90.1
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 8.9e-255 883.2 499 90.0
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 2.6e-254 881.7 498 89.0
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 4.4e-254 880.9 498 89.0
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 4.4e-254 880.9 498 89.0
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 7.6e-254 880.2 493 89.5
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 1.2e-251 872.8 506 87.2
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 4.6e-251 870.9 491 88.4
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 6.0e-251 870.5 496 88.5
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 1.0e-250 869.8 496 88.3
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 1.0e-250 869.8 504 87.3
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 5.1e-250 867.5 496 88.1
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 4.8e-248 860.9 490 89.0
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 8.4e-245 850.1 485 88.0
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 3.0e-234 815.1 493 83.0
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 2.5e-220 768.8 525 76.6
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 2.5e-220 768.8 497 77.3
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 1.1e-217 760.0 486 78.0
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.6e-216 756.1 494 76.9
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 8.2e-216 753.8 490 76.9
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 2.6e-214 748.8 495 76.4
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 2.6e-214 748.8 493 76.9
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.5e-214 748.0 492 75.4
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 1.0e-213 746.9 495 75.4
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 9.4e-212 740.3 488 75.8
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 2.7e-211 738.8 498 74.9
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 2.3e-210 735.7 492 74.8
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 2.3e-210 735.7 492 75.8
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 2.3e-210 735.7 489 75.7
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 3.0e-210 735.3 485 76.1
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 3.0e-210 735.3 488 74.6
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 3.9e-210 734.9 491 74.9
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 5.1e-210 734.6 494 74.7
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 6.7e-210 734.2 495 74.5
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 6.7e-210 734.2 492 75.0
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 8.8e-210 733.8 499 73.7
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.1e-209 733.4 488 75.6
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 4.4e-209 731.5 492 74.4
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 5.7e-209 731.1 491 73.3
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 7.4e-209 730.7 491 74.5
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 9.7e-209 730.3 480 76.2
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.8e-208 728.8 493 74.8
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 4.8e-208 728.0 495 73.9
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 8.2e-208 727.2 490 73.3
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.2e-208 727.2 493 74.6
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 8.2e-208 727.2 512 71.5
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 1.1e-207 726.9 495 74.1
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.8e-207 726.1 488 74.4
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 2.4e-207 725.7 496 73.2
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 3.1e-207 725.3 485 74.6
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 6.9e-207 724.2 494 74.1
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-206 723.0 493 74.6
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 2.0e-206 722.6 478 75.3
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 4.5e-206 721.5 482 75.3
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 7.7e-206 720.7 491 72.7
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 1.7e-205 719.5 492 73.0
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 2.9e-205 718.8 493 73.2
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 7.2e-204 714.1 485 74.0
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.2e-203 713.4 492 72.2
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 1.6e-203 713.0 486 73.0
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 1.6e-203 713.0 492 73.4
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.6e-203 713.0 500 71.6
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.7e-203 712.2 485 74.2
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 2.7e-203 712.2 485 74.2
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.6e-203 711.8 491 72.7
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 4.7e-203 711.4 490 73.7
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 4.7e-203 711.4 482 72.4
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 6.1e-203 711.1 480 73.5
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 7.9e-203 710.7 491 73.7
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 7.9e-203 710.7 489 73.0
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 7.9e-203 710.7 489 73.4
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.0e-202 710.3 489 73.0
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 1.3e-200 703.4 480 73.5
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 2.8e-200 702.2 491 72.9
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 4.8e-200 701.4 494 72.7
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 4.1e-199 698.4 491 72.1
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 5.3e-199 698.0 478 73.4
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.2e-198 696.8 523 69.2
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.8e-197 691.8 485 72.0
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 2.5e-196 689.1 485 71.1
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 1.2e-195 686.8 529 68.1
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 1.5e-193 679.9 497 68.2
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-193 679.9 483 70.6
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 1.5e-193 679.9 483 70.6
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 1.4e-191 673.3 481 69.6
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 7.0e-191 671.0 494 68.8
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.0e-190 669.5 490 69.2
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 1.7e-189 666.4 495 69.1
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.5e-188 663.3 452 72.6
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 1.2e-187 660.2 492 70.5
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 2.7e-187 659.1 486 66.9
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 1.2e-185 653.7 488 66.6
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 5.7e-185 651.4 481 67.6
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 2.2e-184 649.4 515 65.2
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 4.8e-184 648.3 578 59.3
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 7.7e-182 641.0 496 64.7
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 6.5e-181 637.9 487 67.8
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 8.6e-181 637.5 488 64.8
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.5e-180 636.7 486 66.0
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 5.5e-180 634.8 496 67.3
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 5.5e-180 634.8 483 65.8
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 3.6e-179 632.1 569 60.3
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 3.6e-179 632.1 485 66.8
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 8.8e-178 627.5 501 61.7
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 5.7e-177 624.8 508 61.2
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 5.4e-175 618.2 481 66.5
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 9.2e-175 617.5 364 87.1
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 1.6e-174 616.7 486 63.6
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 3.5e-174 615.5 476 65.8
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 9.5e-172 607.4 495 65.7
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 2.3e-170 602.8 486 66.3
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.5e-169 600.1 482 64.1
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 4.1e-167 592.0 402 73.4
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.1e-162 575.9 502 62.9
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 8.3e-160 567.8 450 62.2
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 1.3e-157 560.5 503 57.1
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 1.6e-155 553.5 378 74.1
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 4.4e-153 545.4 492 57.1
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-148 530.8 370 74.9
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 7.3e-148 528.1 549 54.8
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.1e-147 524.6 394 69.0
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 2.4e-146 523.1 357 73.7
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 2.4e-146 523.1 401 66.8
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.3e-141 506.5 344 75.9
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 4.3e-140 502.3 392 67.9
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.6e-139 499.2 355 72.1
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 1.8e-125 453.8 468 51.7
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 1.9e-124 450.3 356 67.4
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.3e-117 427.6 403 57.8
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 2.5e-116 423.3 303 71.9
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 5.8e-113 412.1 276 76.1
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.0e-112 411.4 280 73.6
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.0e-110 402.1 270 76.3
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 7.2e-87 325.5 233 70.8
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 8.8e-85 318.5 469 40.1
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 8.0e-78 295.4 247 65.2
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.3e-76 290.0 188 77.7
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.1e-74 283.5 182 74.2
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 2.0e-68 264.2 137 95.6
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 3.4e-68 263.5 204 68.6
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 1.8e-61 241.1 200 61.0
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 5.6e-55 219.5 134 80.6
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 4.4e-52 209.9 228 52.2
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 1.9e-50 204.5 153 69.3
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 4.6e-49 199.9 126 77.8
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 6.0e-49 199.5 253 45.8
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 7.8e-49 199.1 134 73.1
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 4.9e-43 179.9 291 43.3
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.1e-41 174.5 114 71.9
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 1.5e-39 168.3 123 67.5
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.3e-37 161.0 114 69.3
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 1.6e-33 148.3 93 75.3
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 1.6e-33 148.3 93 75.3
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 2.1e-33 147.9 205 43.9
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 4.6e-25 120.2 69 82.6
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.5e-23 115.2 63 85.7
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 2.5e-23 114.4 68 80.9
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 4.3e-23 113.6 97 63.9
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.6e-22 111.7 72 72.2
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 3.1e-21 107.5 65 81.5
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 1.5e-20 105.1 67 74.6
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.6e-20 104.4 65 78.5
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 7.6e-20 102.8 65 76.9
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 9.9e-20 102.4 102 57.8
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 7.1e-18 96.3 63 81.0
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 2.1e-17 94.7 77 66.2
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 2.5e-15 87.8 180 36.7
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.6e-12 77.8 48 64.6
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 1.6e-09 68.6 37 81.1
BcaC03g13887 Brassica carinata HOM05D003643 ORTHO05D032482 2.5e-07 61.2 37 78.4
C02p10890 Brassica napus HOM05D003643 ORTHO05D032482 7.4e-07 59.7 36 77.8
BolC2t07159H Brassica oleracea HOM05D003643 ORTHO05D032482 7.4e-07 59.7 36 77.8
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 4.8e-06 57.0 48 68.8


User provided reference genes

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