Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0004_0070 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.3e-75 285.4 137 100.0
SpUn0066_0020 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.3e-75 285.4 137 100.0
Sp6g26890 Schrenkiella parvula HOM05D009160 ORTHO05D009596 2.5e-61 238.8 140 84.3
Thhalv10015780m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 7.9e-44 180.6 131 69.5
BolC3t13454H Brassica oleracea HOM05D009160 ORTHO05D009596 8.5e-30 134.0 125 56.8
BcaB01g05200 Brassica carinata HOM05D009160 ORTHO05D009596 2.1e-28 129.4 131 54.2
BolC3t13461H Brassica oleracea HOM05D009160 ORTHO05D009596 2.1e-28 129.4 131 54.2
BcaB01g05201 Brassica carinata HOM05D009160 ORTHO05D009596 3.6e-28 128.6 125 52.8
C03p09660 Brassica napus HOM05D009160 ORTHO05D009596 3.6e-28 128.6 125 53.6
BolC3t13462H Brassica oleracea HOM05D009160 ORTHO05D009596 3.6e-28 128.6 125 52.8
BcaB01g05193 Brassica carinata HOM05D009160 ORTHO05D009596 4.7e-28 128.3 131 55.0
C03p09670 Brassica napus HOM05D009160 ORTHO05D009596 4.7e-28 128.3 131 55.0
BolC3t13455H Brassica oleracea HOM05D009160 ORTHO05D009596 4.7e-28 128.3 131 55.0
A03p08340 Brassica napus HOM05D009160 ORTHO05D009596 8.0e-28 127.5 125 52.8
A03p08300 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-27 126.7 131 54.2
C03p09690 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-27 126.7 125 53.6
C03p09710 Brassica napus HOM05D009160 ORTHO05D009596 1.4e-27 126.7 131 53.4
C03p09720 Brassica napus HOM05D009160 ORTHO05D009596 1.8e-27 126.3 125 52.0
BolC3t13456H Brassica oleracea HOM05D009160 ORTHO05D009596 1.8e-27 126.3 125 51.2
C03p09680 Brassica napus HOM05D009160 ORTHO05D009596 3.0e-27 125.6 125 51.2
BcaB01g05195 Brassica carinata HOM05D009160 ORTHO05D009596 1.1e-26 123.6 125 50.4
BraA03t10152Z Brassica rapa HOM05D009160 ORTHO05D009596 1.5e-26 123.2 125 50.4
BcaB01g04931 Brassica carinata HOM05D009160 ORTHO05D009596 4.4e-26 121.7 125 49.6
BcaB01g04929 Brassica carinata HOM05D009160 ORTHO05D009596 5.7e-26 121.3 125 49.6
BcaB01g04930 Brassica carinata HOM05D009160 ORTHO05D009596 9.7e-26 120.6 125 48.8
BcaB01g04927 Brassica carinata HOM05D009160 ORTHO05D009596 2.2e-25 119.4 125 48.8
BolC3t13458H Brassica oleracea HOM05D009160 ORTHO05D009596 2.2e-25 119.4 125 52.0
BcaB01g04928 Brassica carinata HOM05D009160 ORTHO05D009596 2.8e-25 119.0 125 48.8
BcaB01g04933 Brassica carinata HOM05D009160 ORTHO05D009596 4.8e-25 118.2 129 51.2
Thhalv10014860m.g Eutrema salsugineum HOM05D009029 ORTHO05D009596 8.2e-25 117.5 170 41.2
BraA03t10149Z Brassica rapa HOM05D009160 ORTHO05D009596 1.1e-24 117.1 129 51.2
BraA03t10150Z Brassica rapa HOM05D009160 ORTHO05D009596 1.1e-24 117.1 125 48.0
Thhalv10015886m.g Eutrema salsugineum HOM05D009160 ORTHO05D009596 2.4e-24 115.9 131 48.9
A03p08310 Brassica napus HOM05D009160 ORTHO05D009596 1.2e-23 113.6 125 46.4
CARHR195870 Cardamine hirsuta HOM05D009029 ORTHO05D009596 3.8e-22 108.6 168 36.9
Sp6g26880 Schrenkiella parvula HOM05D009029 ORTHO05D009596 2.5e-21 105.9 158 40.5
BcaB08g36781 Brassica carinata HOM05D009029 ORTHO05D009596 4.2e-21 105.1 168 38.7
A03p08320 Brassica napus HOM05D009160 ORTHO05D009596 4.2e-21 105.1 109 47.7
BraA02t05377Z Brassica rapa HOM05D009029 ORTHO05D009596 7.2e-21 104.4 168 37.5
BcaC03g18552 Brassica carinata HOM05D009029 ORTHO05D009596 1.6e-20 103.2 168 36.9
A02p04140 Brassica napus HOM05D009029 ORTHO05D009596 1.6e-20 103.2 168 36.9
C02p08990 Brassica napus HOM05D009029 ORTHO05D009596 1.6e-20 103.2 168 36.9
BolC2t06808H Brassica oleracea HOM05D009029 ORTHO05D009596 1.6e-20 103.2 168 36.9
Carub.0006s1555 Capsella rubella HOM05D009029 ORTHO05D009596 2.1e-20 102.8 166 37.3
Carub.0006s1554 Capsella rubella HOM05D009029 ORTHO05D009596 2.7e-20 102.4 150 42.0
BcaB05g23261 Brassica carinata HOM05D009029 ORTHO05D009596 6.1e-20 101.3 168 37.5
AT5G17340 Arabidopsis thaliana HOM05D009029 ORTHO05D009596 8.0e-20 100.9 163 39.3
AL6G28410 Arabidopsis lyrata HOM05D009029 ORTHO05D009596 3.0e-19 99.0 163 38.0
BcaB08g36782 Brassica carinata HOM05D009029 ORTHO05D009596 4.0e-19 98.6 152 41.4
A10p22070 Brassica napus HOM05D009029 ORTHO05D009596 5.2e-19 98.2 160 40.6
C09p59860 Brassica napus HOM05D009029 ORTHO05D009596 2.6e-18 95.9 157 40.8
C09p59840 Brassica napus HOM05D009029 ORTHO05D009596 3.4e-18 95.5 159 40.9
BolC1t01146H Brassica oleracea HOM05D009029 ORTHO05D009596 5.7e-18 94.7 160 40.6
CARHR195880 Cardamine hirsuta HOM05D009029 ORTHO05D009596 7.5e-18 94.4 88 54.5
BcaC09g51570 Brassica carinata HOM05D009029 ORTHO05D009596 2.8e-17 92.4 161 40.4
BraA10t44266Z Brassica rapa HOM05D009029 ORTHO05D009596 6.3e-17 91.3 154 40.3
BraA10t44265Z Brassica rapa HOM05D009029 ORTHO05D009596 5.9e-15 84.7 82 47.6
BolC9t58822H Brassica oleracea HOM05D009029 ORTHO05D009596 2.2e-14 82.8 142 38.7
THA.LOC104827231 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 8.5e-14 80.9 150 34.7
BcaC04g18803 Brassica carinata HOM05D009029 ORTHO05D009596 9.4e-13 77.4 160 38.1
THA.LOC104820858 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 9.4e-13 77.4 142 32.4
BcaC04g18801 Brassica carinata HOM05D009029 ORTHO05D009596 1.4e-11 73.6 155 33.5
C09p59800 Brassica napus HOM05D009029 ORTHO05D009596 2.6e-10 69.3 145 34.5
THA.LOC104821158 Tarenaya hassleriana HOM05D009029 ORTHO05D009596 3.4e-10 68.9 131 31.3
Prupe.2G194700 Prunus persica HOM05D009029 ORTHO05D009596 2.4e-08 62.8 91 36.3
BcaB01g04926 Brassica carinata HOM05D009160 ORTHO05D009596 7.0e-08 61.2 85 42.4
Aqoxy3G03256 Aquilegia oxysepala HOM05D020091 ORTHO05D009596 5.9e-07 58.2 90 41.1
Aa31LG11G12230 Aethionema arabicum HOM05D009029 ORTHO05D009596 2.9e-06 55.8 163 28.2
Aa31LG11G12340 Aethionema arabicum HOM05D009029 ORTHO05D009596 2.9e-06 55.8 167 28.1


User provided reference genes

Program Settings