Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0003_0170 Schrenkiella parvula HOM05D008266 ORTHO05D000062 1.4e-178 629.4 301 100.0
SpUn1206_0010 Schrenkiella parvula HOM05D008266 ORTHO05D000062 3.4e-71 272.7 204 67.6
Sp2g13780 Schrenkiella parvula HOM05D008266 ORTHO05D000062 2.8e-70 269.6 190 70.5
Sp4g06240 Schrenkiella parvula HOM05D008134 ORTHO05D006374 1.1e-69 267.7 229 62.0
BcaC09g48783 Brassica carinata HOM05D008266 ORTHO05D000062 3.9e-51 206.1 141 68.8
BolC1t04557H Brassica oleracea HOM05D008266 ORTHO05D000062 3.9e-51 206.1 141 68.8
BolC2t08050H Brassica oleracea HOM05D008266 ORTHO05D000062 3.9e-51 206.1 141 68.8
BolC2t10248H Brassica oleracea HOM05D008266 ORTHO05D000062 6.6e-51 205.3 141 68.1
BolC7t42130H Brassica oleracea HOM05D008266 ORTHO05D000062 1.5e-50 204.1 141 68.8
BolC3t18806H Brassica oleracea HOM05D008266 ORTHO05D000062 2.1e-49 200.3 144 68.1
BolC3t20058H Brassica oleracea HOM05D008266 ORTHO05D000062 4.7e-49 199.1 141 67.4
C06p15090 Brassica napus HOM05D008266 ORTHO05D000062 6.2e-49 198.7 141 67.4
BolC6t36685H Brassica oleracea HOM05D008266 ORTHO05D000062 6.2e-49 198.7 141 67.4
BolC5t31567H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-46 189.1 131 66.4
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 1.6e-44 184.1 295 36.9
BcaC02g08794 Brassica carinata HOM05D008266 ORTHO05D000062 4.7e-41 172.6 241 42.3
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 2.9e-38 163.3 305 34.8
BcaC01g03082 Brassica carinata HOM05D008266 ORTHO05D009904 6.4e-38 162.2 285 36.1
Sp1g31350 Schrenkiella parvula HOM05D008266 ORTHO05D000062 3.3e-34 149.8 260 35.4
Sp1g30250 Schrenkiella parvula HOM05D008134 ORTHO05D006374 7.3e-34 148.7 100 72.0
BcaC07g39552 Brassica carinata HOM05D008266 ORTHO05D000062 6.4e-30 135.6 284 32.4
BcaC03g17259 Brassica carinata HOM05D008266 ORTHO05D000062 8.4e-30 135.2 251 33.5
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 1.9e-29 134.0 144 47.2
Sp7g07620 Schrenkiella parvula HOM05D008266 ORTHO05D009904 9.3e-29 131.7 141 48.9
BcaC04g20587 Brassica carinata HOM05D008266 ORTHO05D000062 2.1e-28 130.6 273 32.6
BcaC01g01797 Brassica carinata HOM05D008266 ORTHO05D000062 3.5e-28 129.8 286 33.2
BcaC07g37918 Brassica carinata HOM05D008266 ORTHO05D009904 1.9e-26 124.0 143 44.8
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 6.2e-25 119.0 144 43.8
BolC2t08063H Brassica oleracea HOM05D008266 ORTHO05D000062 1.8e-24 117.5 103 60.2
Sp7g06740 Schrenkiella parvula HOM05D007948 ORTHO05D006374 2.2e-22 110.5 112 47.3
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 4.9e-22 109.4 144 40.3
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 5.4e-21 105.9 315 25.4
BcaC08g44727 Brassica carinata HOM05D008266 ORTHO05D000062 1.2e-20 104.8 143 41.3
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.3e-18 96.3 298 26.8
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 7.4e-18 95.5 304 25.7
Sp5g18930 Schrenkiella parvula HOM05D007948 ORTHO05D006374 6.2e-17 92.4 114 41.2
SpUn0054_0020 Schrenkiella parvula HOM05D007948 ORTHO05D006374 6.2e-17 92.4 114 41.2
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.1e-16 91.7 329 24.9
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 2.2e-14 84.0 340 24.7
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 1.0e-11 75.1 138 34.8
Ca_26934_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000110 3.0e-11 73.6 206 26.2
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 4.3e-10 69.7 151 30.5
THA.LOC104798660 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.3e-10 69.7 91 35.2
THA.LOC104810679 Tarenaya hassleriana HOM05D000107 ORTHO05D009534 4.3e-10 69.7 91 35.2
THA.LOC104815165 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.3e-10 69.7 91 35.2
THA.LOC104818152 Tarenaya hassleriana HOM05D000107 ORTHO05D009534 4.3e-10 69.7 91 35.2
THA.LOC104820082 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 4.3e-10 69.7 91 35.2
BcaC08g44331 Brassica carinata HOM05D008266 ORTHO05D000062 1.3e-09 68.2 104 32.7
BcaC05g26938 Brassica carinata HOM05D008266 ORTHO05D009904 1.6e-09 67.8 153 28.1
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 1.6e-09 67.8 142 32.4
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 2.1e-09 67.4 117 30.8
COL.COLO4_36518 Corchorus olitorius HOM05D008266 ORTHO05D000062 2.1e-09 67.4 72 44.4
THA.LOC104816687 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 3.7e-09 66.6 256 23.0
Manes.14G168266 Manihot esculenta HOM05D008266 ORTHO05D000062 4.8e-09 66.2 69 40.6
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 6.2e-09 65.9 144 29.9
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 6.2e-09 65.9 68 41.2
Manes.09G152601 Manihot esculenta HOM05D000107 ORTHO05D000062 6.2e-09 65.9 68 41.2
Manes.11G017526 Manihot esculenta HOM05D000107 ORTHO05D000062 6.2e-09 65.9 68 41.2
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-08 65.1 153 30.1
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 1.1e-08 65.1 139 29.5
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 1.4e-08 64.7 96 34.4
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 3.1e-08 63.5 130 33.1
SpUn0001_0660 Schrenkiella parvula HOM05D007948 ORTHO05D006374 3.1e-08 63.5 230 25.7
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 4.0e-08 63.2 147 31.3
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 5.3e-08 62.8 96 35.4
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 5.3e-08 62.8 149 32.9
THA.LOC104798989 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 9.0e-08 62.0 158 31.0
Ah.02g121890 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.2e-07 61.6 130 30.0
COL.COLO4_04723 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.2e-07 61.6 85 36.5
THA.LOC104823114 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.2e-07 61.6 121 31.4
COL.COLO4_24208 Corchorus olitorius HOM05D016401 ORTHO05D009534 2.0e-07 60.8 183 24.6
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.4e-07 60.1 86 33.7
BcaB02g10137 Brassica carinata HOM05D008266 ORTHO05D000062 4.5e-07 59.7 140 26.4
Aa31sc135G30 Aethionema arabicum HOM05D001086 ORTHO05D009904 5.8e-07 59.3 197 25.4
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 5.8e-07 59.3 81 35.8
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.6e-07 58.9 87 34.5
Sopen01g011190 Solanum pennellii HOM05D000002 ORTHO05D010545 7.6e-07 58.9 69 40.6
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 1.3e-06 58.2 142 28.9
BcaC08g44714 Brassica carinata HOM05D008266 ORTHO05D021591 1.3e-06 58.2 57 42.1
Sp4g05050 Schrenkiella parvula HOM05D012607 ORTHO05D014259 1.3e-06 58.2 45 51.1
Solyc04g039705.1 Solanum lycopersicum HOM05D010076 ORTHO05D012500 3.8e-06 56.6 112 28.6
COL.COLO4_22692 Corchorus olitorius HOM05D025240 ORTHO05D019037 4.9e-06 56.2 72 37.5
COL.COLO4_23532 Corchorus olitorius HOM05D000107 ORTHO05D000062 4.9e-06 56.2 68 36.8
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 4.9e-06 56.2 151 27.8
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 4.9e-06 56.2 89 32.6
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 6.5e-06 55.8 70 38.6
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 6.5e-06 55.8 151 26.5
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 6.5e-06 55.8 86 33.7
BcaB01g00797 Brassica carinata HOM05D008266 ORTHO05D000062 8.4e-06 55.5 33 66.7
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 8.4e-06 55.5 138 28.3
SpUn0001_0630 Schrenkiella parvula HOM05D023646 ORTHO05D000568 8.4e-06 55.5 54 46.3
TPR.G532 Trifolium pratense HOM05D000107 ORTHO05D000062 8.4e-06 55.5 100 30.0


User provided reference genes

Program Settings