Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0003_0140 Schrenkiella parvula HOM05D000003 ORTHO05D014927 5.6e-127 457.6 228 100.0
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-11 73.6 84 47.6
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 3.9e-11 72.8 78 43.6
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 8.6e-11 71.6 73 45.2
C04p37710 Brassica napus HOM05D000003 ORTHO05D014927 1.5e-10 70.9 71 46.5
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 3.6e-09 66.2 74 44.6
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-09 65.9 74 44.6
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 4.7e-09 65.9 74 44.6
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 4.7e-09 65.9 74 44.6
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 4.7e-09 65.9 74 44.6
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 4.7e-09 65.9 74 44.6
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-09 65.1 74 44.6
BraA08t34343Z Brassica rapa HOM05D000003 ORTHO05D014927 2.3e-08 63.5 71 42.3
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-07 60.8 74 37.8
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-07 60.1 74 37.8
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 2.6e-07 60.1 74 37.8
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 2.6e-07 60.1 74 37.8
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 3.4e-07 59.7 86 39.5
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-07 59.3 73 38.4
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 5.8e-07 58.9 78 35.9
Carub.0007s3605 Capsella rubella HOM05D000003 ORTHO05D001498 2.2e-06 57.0 74 40.5
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 2.9e-06 56.6 75 40.0
BcaB04g19028 Brassica carinata HOM05D000003 ORTHO05D000004 3.7e-06 56.2 79 39.2
BcaC05g27246 Brassica carinata HOM05D000003 ORTHO05D001498 8.4e-06 55.1 80 37.5
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 8.4e-06 55.1 77 37.7


User provided reference genes

Program Settings