Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0003_0120 Schrenkiella parvula HOM05D008883 ORTHO05D011075 7.8e-103 377.1 185 100.0
Sp5g18780 Schrenkiella parvula HOM05D008883 ORTHO05D011075 8.4e-73 277.3 148 91.9
Sp5g18640 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.4e-67 259.2 184 74.5
SpUn1191_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.3e-65 253.4 148 80.4
SpUn0486_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.4e-59 232.6 176 64.2
BcaC05g29665 Brassica carinata HOM05D008883 ORTHO05D011075 4.2e-56 221.9 183 60.7
C08p54100 Brassica napus HOM05D008883 ORTHO05D011075 4.2e-56 221.9 183 60.7
BolC8t52918H Brassica oleracea HOM05D008883 ORTHO05D011075 4.2e-56 221.9 183 60.7
BcaB08g35019 Brassica carinata HOM05D008883 ORTHO05D011075 1.8e-51 206.5 183 53.6
SpUn1299_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.0e-50 203.0 148 66.2
BcaB06g27532 Brassica carinata HOM05D008883 ORTHO05D011075 4.5e-50 201.8 183 53.0
Sp3g24800 Schrenkiella parvula HOM05D008883 ORTHO05D011075 6.9e-43 177.9 176 53.4
Sp7g07010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 3.2e-40 169.1 183 51.4
BcaC04g20434 Brassica carinata HOM05D008883 ORTHO05D011075 5.5e-40 168.3 175 48.0
A09p69320 Brassica napus HOM05D008883 ORTHO05D011075 2.1e-39 166.4 175 47.4
BolC8t52922H Brassica oleracea HOM05D008883 ORTHO05D011075 2.1e-39 166.4 175 47.4
BcaC04g20436 Brassica carinata HOM05D008883 ORTHO05D011075 7.9e-39 164.5 172 48.3
CARHR158160 Cardamine hirsuta HOM05D008883 ORTHO05D011075 1.4e-35 153.7 167 46.1
CARHR108020 Cardamine hirsuta HOM05D008883 ORTHO05D011075 3.1e-35 152.5 159 45.9
A09p69280 Brassica napus HOM05D008883 ORTHO05D011075 3.8e-33 145.6 129 57.4
A09p69290 Brassica napus HOM05D008883 ORTHO05D011075 1.2e-31 140.6 172 43.6
BolC8t52919H Brassica oleracea HOM05D008883 ORTHO05D011075 1.2e-31 140.6 172 43.6
Sp1g33150 Schrenkiella parvula HOM05D008883 ORTHO05D011075 5.2e-30 135.2 135 52.6
Sp6g12610 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.8e-28 129.4 148 50.7
SpUn0015_0030 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.8e-28 129.4 148 50.7
SpUn0039_0060 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.8e-28 129.4 148 50.7
BcaC05g29663 Brassica carinata HOM05D008883 ORTHO05D011075 1.4e-27 127.1 175 40.6
Sp7g05080 Schrenkiella parvula HOM05D008883 ORTHO05D011075 4.1e-27 125.6 147 46.3
Sp7g05660 Schrenkiella parvula HOM05D008883 ORTHO05D011075 7.7e-26 121.3 148 50.0
BcaC04g20437 Brassica carinata HOM05D008883 ORTHO05D011075 2.2e-25 119.8 109 55.0
C08p54140 Brassica napus HOM05D008883 ORTHO05D011075 1.5e-24 117.1 117 48.7
SpUn0001_0500 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.2e-23 114.0 168 42.9
SpUn0002_0140 Schrenkiella parvula HOM05D008883 ORTHO05D011075 2.0e-21 106.7 73 68.5
SpUn0011_0050 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.7e-20 103.6 112 50.0
SpUn0052_0010 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.7e-20 103.6 112 50.0
SpUn0057_0050 Schrenkiella parvula HOM05D008883 ORTHO05D011075 1.7e-20 103.6 112 50.0
BolC2t12326H Brassica oleracea HOM05D008292 ORTHO05D003352 1.0e-14 84.3 155 29.7
BcaB08g35020 Brassica carinata HOM05D008883 ORTHO05D011075 2.3e-14 83.2 78 52.6
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 4.0e-14 82.4 155 29.0
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 4.0e-14 82.4 155 29.0
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 8.8e-14 81.3 155 29.0
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 1.5e-13 80.5 156 27.6
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 9.8e-13 77.8 142 33.8
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 2.2e-12 76.6 149 27.5
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 2.8e-12 76.3 173 28.9
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 6.3e-12 75.1 160 28.1
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 1.4e-11 73.9 173 28.3
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 2.4e-11 73.2 149 28.2
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 3.1e-11 72.8 156 26.3
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 9.1e-11 71.2 173 26.6
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 1.2e-10 70.9 170 26.5
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 2.0e-10 70.1 147 26.5
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.0e-10 70.1 162 27.2
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 2.0e-10 70.1 147 26.5
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 5.9e-10 68.6 154 31.8
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 7.7e-10 68.2 152 29.6
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 1.0e-09 67.8 164 29.9
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 1.0e-09 67.8 164 29.9
BcaB04g16904 Brassica carinata HOM05D008292 ORTHO05D003352 1.0e-09 67.8 181 27.1
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-09 67.4 169 27.8
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 1.3e-09 67.4 169 27.8
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 1.7e-09 67.0 162 28.4
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 1.7e-09 67.0 162 28.4
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-09 66.6 146 28.8
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 2.9e-09 66.2 162 26.5
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 3.8e-09 65.9 147 25.2
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 3.8e-09 65.9 144 25.7
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 3.8e-09 65.9 154 27.9
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 5.0e-09 65.5 129 27.9
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 6.5e-09 65.1 154 26.0
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 1.1e-08 64.3 173 27.2
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 1.1e-08 64.3 173 27.2
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 1.1e-08 64.3 120 32.5
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 1.1e-08 64.3 154 26.0
BcaC05g29664 Brassica carinata HOM05D008883 ORTHO05D011075 1.5e-08 63.9 55 52.7
BcaC07g37399 Brassica carinata HOM05D008292 ORTHO05D003352 1.5e-08 63.9 139 26.6
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 1.5e-08 63.9 149 26.8
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 1.9e-08 63.5 128 28.9
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-08 63.5 162 25.3
C08p54110 Brassica napus HOM05D008883 ORTHO05D011075 1.9e-08 63.5 93 37.6
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 4.2e-08 62.4 151 27.2
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 5.5e-08 62.0 146 26.7
THA.LOC104810144 Tarenaya hassleriana HOM05D002915 ORTHO05D003004 9.5e-08 61.2 170 27.6
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 1.6e-07 60.5 134 31.3
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 2.1e-07 60.1 174 27.6
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 3.6e-07 59.3 153 24.2
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 4.7e-07 58.9 133 27.8
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 4.7e-07 58.9 127 24.4
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 6.1e-07 58.5 122 27.9
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 8.0e-07 58.2 145 29.7
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.0e-06 57.8 167 27.5
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 1.0e-06 57.8 172 22.7
Carub.0002s1396 Capsella rubella HOM05D002915 ORTHO05D003004 1.4e-06 57.4 121 30.6
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 1.8e-06 57.0 128 26.6
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.0e-06 56.2 129 27.9
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 3.0e-06 56.2 151 29.1
Psat0s3757g0040 Pisum sativum HOM05D002915 ORTHO05D003004 3.0e-06 56.2 88 35.2
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 4.0e-06 55.8 169 26.6
AL2G26290 Arabidopsis lyrata HOM05D002915 ORTHO05D003004 4.0e-06 55.8 132 28.8
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 5.2e-06 55.5 161 26.7
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 5.2e-06 55.5 176 22.2
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-06 55.1 174 21.8
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.8e-06 55.1 116 28.4
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 6.8e-06 55.1 162 25.3
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 8.8e-06 54.7 167 24.6
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 8.8e-06 54.7 174 21.8


User provided reference genes

Program Settings