Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0001_0880 Schrenkiella parvula HOM05D008792 ORTHO05D000880 4.9e-97 357.8 185 100.0
BolC9t56441H Brassica oleracea HOM05D008792 ORTHO05D000880 2.8e-20 102.8 188 37.2
BolC2t10159H Brassica oleracea HOM05D008792 ORTHO05D000880 1.3e-17 94.0 84 57.1
BraA10t42978Z Brassica rapa HOM05D008792 ORTHO05D014929 6.5e-17 91.7 68 64.7
TWI38G2319 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.2e-16 89.4 76 51.3
CANSAT35G0117 Cannabis sativa HOM05D000429 ORTHO05D000880 4.2e-16 89.0 68 58.8
BolC1t03346H Brassica oleracea HOM05D008792 ORTHO05D000880 5.5e-16 88.6 160 35.0
BolC9t56771H Brassica oleracea HOM05D000429 ORTHO05D000880 5.5e-16 88.6 76 56.6
BolC2t10001H Brassica oleracea HOM05D000429 ORTHO05D000880 1.2e-15 87.4 103 46.6
BraA05t21181Z Brassica rapa HOM05D000429 ORTHO05D000880 1.2e-15 87.4 65 61.5
BolC9t56693H Brassica oleracea HOM05D008792 ORTHO05D014929 2.3e-14 83.2 68 60.3
BolC3t19041H Brassica oleracea HOM05D000429 ORTHO05D000880 6.8e-14 81.6 76 53.9
BolC8t47585H Brassica oleracea HOM05D000429 ORTHO05D000880 1.5e-13 80.5 48 75.0
TWI39G0468 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.0e-13 80.1 114 37.7
TWI34G1687 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.4e-13 79.0 114 36.8
BolC8t47948H Brassica oleracea HOM05D000429 ORTHO05D000880 5.7e-13 78.6 62 62.9
Sp1g30980 Schrenkiella parvula HOM05D008792 ORTHO05D014929 5.7e-13 78.6 143 37.8
TWI36G0153 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.7e-13 78.6 77 44.2
TWI31G0704 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.7e-10 68.2 63 47.6
TWI73G1087 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.7e-10 68.2 63 47.6
TWI81G0273 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.7e-10 68.2 63 47.6
EL10Ac1g01775 Beta vulgaris HOM05D000429 ORTHO05D000880 2.9e-09 66.2 78 43.6
EL10Ac4g08314 Beta vulgaris HOM05D000429 ORTHO05D000880 2.9e-09 66.2 78 43.6
CARHR257880 Cardamine hirsuta HOM05D008792 ORTHO05D014929 2.9e-09 66.2 45 71.1
EL10Ac3g07041 Beta vulgaris HOM05D000429 ORTHO05D000880 5.0e-09 65.5 78 43.6
EL10Ac9g22487 Beta vulgaris HOM05D000429 ORTHO05D000880 5.0e-09 65.5 78 42.3
EL10As19g24191 Beta vulgaris HOM05D000429 ORTHO05D000880 5.0e-09 65.5 78 43.6
EL10As7g23750 Beta vulgaris HOM05D000429 ORTHO05D000880 5.0e-09 65.5 78 43.6
TWI31G0666 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 6.5e-09 65.1 63 46.0
EL10Ac9g22368 Beta vulgaris HOM05D010007 ORTHO05D006083 8.6e-09 64.7 76 44.7
TWI81G0183 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 8.6e-09 64.7 63 46.0
EL10Ac2g02650 Beta vulgaris HOM05D000429 ORTHO05D000880 1.5e-08 63.9 78 42.3
EL10As9g23929 Beta vulgaris HOM05D000429 ORTHO05D000880 2.5e-08 63.2 75 44.0
ECA246G5147 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.2e-08 62.8 89 37.1
BraA06t25271Z Brassica rapa HOM05D008792 ORTHO05D000880 4.2e-08 62.4 74 47.3
ECA232G4305 Erigeron canadensis HOM05D000047 ORTHO05D000352 5.5e-08 62.0 93 34.4
EL10Ac6g14450 Beta vulgaris HOM05D000429 ORTHO05D000880 1.2e-07 60.8 77 40.3
BraA10t42913Z Brassica rapa HOM05D008792 ORTHO05D014929 1.2e-07 60.8 61 52.5
EL10As2g23226 Beta vulgaris HOM05D000429 ORTHO05D000880 2.8e-07 59.7 76 43.4
ECA238G3793 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-07 59.7 81 39.5
ECA232G1319 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-07 59.3 89 33.7
EL10Ac1g01780 Beta vulgaris HOM05D000995 ORTHO05D000880 4.7e-07 58.9 78 38.5
ECA232G1586 Erigeron canadensis HOM05D000429 ORTHO05D000352 4.7e-07 58.9 89 36.0
ECA238G2315 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.0e-06 57.8 87 33.3
TWI18G0159 Tripterygium wilfordii HOM05D000429 ORTHO05D000880 1.4e-06 57.4 59 44.1
EL10Ac4g09042 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-06 57.0 76 38.2
BolC4t24080H Brassica oleracea HOM05D000429 ORTHO05D000880 1.8e-06 57.0 34 73.5
ECA246G1595 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.3e-06 56.6 89 37.1
BolC8t47303H Brassica oleracea HOM05D000429 ORTHO05D000880 3.0e-06 56.2 34 70.6
HanXRQChr10g0279851 Helianthus annuus HOM05D000047 ORTHO05D000044 4.0e-06 55.8 72 34.7
ECA247G3812 Erigeron canadensis HOM05D000429 ORTHO05D000352 5.2e-06 55.5 93 33.3


User provided reference genes

Program Settings