Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0001_0410 Schrenkiella parvula HOM05D000096 ORTHO05D000045 1.7e-48 195.7 97 100.0
Sp4g06490 Schrenkiella parvula HOM05D000096 ORTHO05D000045 8.1e-27 123.6 98 66.3
A09p69310 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-23 110.2 112 50.0
BolC8t52921H Brassica oleracea HOM05D000096 ORTHO05D000045 9.3e-23 110.2 112 50.0
Sp7g08240 Schrenkiella parvula HOM05D000096 ORTHO05D000045 4.3e-20 101.3 97 52.6
CARHR217630 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.5e-15 85.5 95 49.5
CARHR101910 Cardamine hirsuta HOM05D000096 ORTHO05D000045 3.5e-14 81.6 113 43.4
Sp1g33170 Schrenkiella parvula HOM05D000096 ORTHO05D020211 1.1e-12 76.6 89 42.7
C05p17960 Brassica napus HOM05D000096 ORTHO05D000045 1.5e-12 76.3 111 36.0
BolC5t30504H Brassica oleracea HOM05D000096 ORTHO05D000045 1.5e-12 76.3 111 36.0
C06p14810 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-12 75.9 116 37.9
BolC6t36659H Brassica oleracea HOM05D000096 ORTHO05D000045 1.9e-12 75.9 116 37.9
BraA09t39509Z Brassica rapa HOM05D000096 ORTHO05D000045 1.9e-12 75.9 111 36.0
Sp1g33220 Schrenkiella parvula HOM05D000096 ORTHO05D000045 1.9e-12 75.9 50 64.0
C02p26870 Brassica napus HOM05D000096 ORTHO05D000045 2.5e-12 75.5 116 37.9
C04p49100 Brassica napus HOM05D000096 ORTHO05D000045 5.7e-12 74.3 111 37.8
THA.LOC104814022 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 5.7e-12 74.3 111 40.5
SpUn0324_0010 Schrenkiella parvula HOM05D041915 ORTHO05D015528 7.4e-12 73.9 87 46.0
C03p67800 Brassica napus HOM05D000096 ORTHO05D000045 9.7e-12 73.6 114 39.5
C09p55220 Brassica napus HOM05D000096 ORTHO05D000045 9.7e-12 73.6 116 37.9
C09p33210 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-11 72.8 111 37.8
C07p15510 Brassica napus HOM05D000096 ORTHO05D000045 3.7e-11 71.6 111 34.2
THA.LOC104810215 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 4.1e-10 68.2 109 38.5
C01p48130 Brassica napus HOM05D000096 ORTHO05D000045 5.3e-10 67.8 112 36.6
BolC1t03160H Brassica oleracea HOM05D000096 ORTHO05D015528 5.3e-10 67.8 111 36.9
BolC4t25624H Brassica oleracea HOM05D000096 ORTHO05D000045 5.3e-10 67.8 111 36.9
BolC7t43563H Brassica oleracea HOM05D000096 ORTHO05D000045 5.3e-10 67.8 111 36.9
BolC8t46902H Brassica oleracea HOM05D000096 ORTHO05D000045 5.3e-10 67.8 112 36.6
BolC6t37004H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-09 66.6 114 39.5
BolC5t32792H Brassica oleracea HOM05D000096 ORTHO05D000045 1.5e-09 66.2 113 35.4
THA.LOC104804874 Tarenaya hassleriana HOM05D000096 ORTHO05D000045 1.5e-09 66.2 111 32.4
BolC6t36247H Brassica oleracea HOM05D000096 ORTHO05D000045 4.5e-09 64.7 111 33.3
BolC7t42659H Brassica oleracea HOM05D000096 ORTHO05D000045 7.6e-09 63.9 114 33.3
Sp1g36550 Schrenkiella parvula HOM05D000096 ORTHO05D000045 7.6e-09 63.9 116 34.5
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.0e-08 63.5 103 34.0
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 1.0e-08 63.5 103 34.0
BolC2t08777H Brassica oleracea HOM05D000096 ORTHO05D000045 1.3e-08 63.2 110 32.7
BolC4t27773H Brassica oleracea HOM05D000096 ORTHO05D000045 1.3e-08 63.2 110 35.5
BolC9t53920H Brassica oleracea HOM05D000096 ORTHO05D000045 1.3e-08 63.2 110 32.7
Atru.chr1.1323 Acer truncatum HOM05D000096 ORTHO05D000045 1.7e-08 62.8 111 33.3
A03p36950 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-08 62.4 112 35.7
COL.COLO4_07316 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.9e-08 62.0 107 31.8
C01p43790 Brassica napus HOM05D000096 ORTHO05D000045 3.8e-08 61.6 108 35.2
BraA03t12857Z Brassica rapa HOM05D000096 ORTHO05D000045 1.4e-07 59.7 112 34.8
Sp7g01850 Schrenkiella parvula HOM05D000096 ORTHO05D000045 1.4e-07 59.7 109 33.9
BolC1t03025H Brassica oleracea HOM05D000096 ORTHO05D000045 1.9e-07 59.3 116 31.0
BolC3t17673H Brassica oleracea HOM05D000096 ORTHO05D000045 1.9e-07 59.3 116 35.3
BolC8t48617H Brassica oleracea HOM05D000096 ORTHO05D000045 1.9e-07 59.3 99 35.4
C08p09500 Brassica napus HOM05D000096 ORTHO05D000045 2.5e-07 58.9 99 34.3
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 3.2e-07 58.5 112 33.9
C06p14120 Brassica napus HOM05D000096 ORTHO05D000045 4.2e-07 58.2 109 31.2
BolC6t36590H Brassica oleracea HOM05D000096 ORTHO05D000045 4.2e-07 58.2 109 31.2
BolC8t47719H Brassica oleracea HOM05D000096 ORTHO05D000045 4.2e-07 58.2 112 33.9
Glyma.04G116000 Glycine max HOM05D000096 ORTHO05D000045 5.5e-07 57.8 105 34.3
A04p12470 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-07 57.0 107 35.5
A09p34240 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-07 57.0 110 30.0
C09p33530 Brassica napus HOM05D000096 ORTHO05D000045 9.3e-07 57.0 113 36.3
BolC4t27162H Brassica oleracea HOM05D000096 ORTHO05D000045 9.3e-07 57.0 110 29.1
CARHR266460 Cardamine hirsuta HOM05D000096 ORTHO05D000045 9.3e-07 57.0 114 31.6
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-06 56.6 112 33.0
C02p38310 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-06 56.6 110 30.9
BolC5t34078H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-06 56.6 94 37.2
C04p02910 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-06 56.2 110 30.0
BolC4t21931H Brassica oleracea HOM05D000096 ORTHO05D000045 1.6e-06 56.2 110 30.0
PSO478G4227 Papaver somniferum HOM05D000096 ORTHO05D000045 1.6e-06 56.2 103 32.0
C03p68010 Brassica napus HOM05D000096 ORTHO05D000045 2.1e-06 55.8 112 34.8
BolC6t36917H Brassica oleracea HOM05D000096 ORTHO05D000045 2.1e-06 55.8 108 29.6
Hund00765 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.7e-06 55.5 103 33.0
Hund04350 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.7e-06 55.5 103 33.0
Hund04420 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.7e-06 55.5 103 32.0
Hund10785 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.7e-06 55.5 103 33.0
Hund28482 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.6e-06 55.1 103 33.0
Aqoxy1G02587 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 4.6e-06 54.7 104 30.8
BolC6t35822H Brassica oleracea HOM05D000096 ORTHO05D000045 4.6e-06 54.7 110 32.7
Glyma.09G080200 Glycine max HOM05D000096 ORTHO05D000045 4.6e-06 54.7 105 34.3
Hund14972 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.6e-06 54.7 103 33.0
Hund15578 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.6e-06 54.7 103 32.0
Hund15722 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.6e-06 54.7 103 32.0
Hund19720 Selenicereus undatus HOM05D000096 ORTHO05D003441 6.1e-06 54.3 103 31.1
C03p47420 Brassica napus HOM05D000096 ORTHO05D000045 7.9e-06 53.9 96 31.2
RcHm_v2.0_Chr5g0066561 Rosa chinensis HOM05D000096 ORTHO05D000045 7.9e-06 53.9 109 35.8


User provided reference genes

Program Settings