Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0001_0260 Schrenkiella parvula HOM05D005505 ORTHO05D006974 3.6e-299 1030.8 514 100.0
Sp3g21750 Schrenkiella parvula HOM05D005505 ORTHO05D006974 1.0e-168 597.4 507 64.5
BcaB06g26566 Brassica carinata HOM05D005505 ORTHO05D006974 3.1e-165 585.9 510 63.9
Thhalv10002522m.g Eutrema salsugineum HOM05D005505 ORTHO05D006974 2.2e-163 579.7 498 64.3
A07p08370 Brassica napus HOM05D005505 ORTHO05D006974 4.6e-161 572.0 508 63.2
C07p13070 Brassica napus HOM05D005505 ORTHO05D006974 4.6e-161 572.0 508 63.2
C09p75660 Brassica napus HOM05D005505 ORTHO05D006974 4.6e-161 572.0 508 63.2
CARHR099990 Cardamine hirsuta HOM05D005505 ORTHO05D006974 6.0e-161 571.6 508 62.2
AT3G24200 Arabidopsis thaliana HOM05D005505 ORTHO05D006974 7.8e-161 571.2 507 62.3
BcaC06g35602 Brassica carinata HOM05D005505 ORTHO05D006974 2.3e-160 569.7 508 63.0
BolC7t41801H Brassica oleracea HOM05D005505 ORTHO05D006974 2.3e-160 569.7 508 63.0
BraA07t28623Z Brassica rapa HOM05D005505 ORTHO05D006974 1.5e-159 567.0 507 62.3
Carub.0003s2430 Capsella rubella HOM05D005505 ORTHO05D006974 1.5e-159 567.0 507 61.7
THA.LOC104821613 Tarenaya hassleriana HOM05D005505 ORTHO05D006974 1.3e-147 527.3 510 57.1
Aa31LG8G10580 Aethionema arabicum HOM05D005505 ORTHO05D006974 8.4e-147 524.6 510 57.5
BcaC05g30344 Brassica carinata HOM05D005505 ORTHO05D007330 1.1e-125 454.5 472 57.4
Ciclev10004754m.g Citrus clementina HOM05D005505 ORTHO05D006974 3.9e-120 436.0 508 48.0
COL.COLO4_20306 Corchorus olitorius HOM05D005505 ORTHO05D006974 5.1e-120 435.6 508 47.6
Thecc.04G209900 Theobroma cacao HOM05D005505 ORTHO05D006974 7.4e-119 431.8 509 48.3
Atru.chr4.1761 Acer truncatum HOM05D005505 ORTHO05D006974 2.8e-118 429.9 507 47.3
Gorai.006G220300 Gossypium raimondii HOM05D005505 ORTHO05D006974 1.5e-116 424.1 512 47.5
Gohir.A09G202800 Gossypium hirsutum HOM05D005505 ORTHO05D006974 1.7e-115 420.6 512 47.3
Gohir.D09G196900 Gossypium hirsutum HOM05D005505 ORTHO05D006974 6.5e-115 418.7 512 46.9
Duzib212G0911 Durio zibethinus HOM05D005505 ORTHO05D006974 8.5e-115 418.3 499 48.1
MELO3C016329.2 Cucumis melo HOM05D005505 ORTHO05D006974 4.2e-114 416.0 510 47.3
CiPaw.02G067600 Carya illinoinensis HOM05D005505 ORTHO05D006974 1.2e-113 414.5 507 46.4
Potri.001G051200 Populus trichocarpa HOM05D005505 ORTHO05D006974 1.2e-113 414.5 493 47.3
Manes.03G149700 Manihot esculenta HOM05D005505 ORTHO05D006974 1.6e-113 414.1 495 47.1
vmacro00503 Vaccinium macrocarpon HOM05D005505 ORTHO05D006974 2.7e-113 413.3 507 46.5
CsaV3_4G006210 Cucumis sativus L. HOM05D005505 ORTHO05D006974 4.6e-113 412.5 496 48.0
arahy.Tifrunner.gnm1.ann1.ZRDJ5X Arachis hypogaea HOM05D005505 ORTHO05D006974 1.4e-112 411.0 513 45.2
DCAR_030788 Daucus carota HOM05D005505 ORTHO05D006974 1.4e-112 411.0 511 46.2
arahy.Tifrunner.gnm1.ann1.QX4MR3 Arachis hypogaea HOM05D005505 ORTHO05D006974 3.0e-112 409.8 513 44.8
ClCG07G007730 Citrullus lanatus HOM05D005505 ORTHO05D006974 3.0e-112 409.8 510 46.5
arahy.Tifrunner.gnm1.ann1.H9DAM7 Arachis hypogaea HOM05D005505 ORTHO05D006974 5.1e-112 409.1 513 44.8
TAR636G3130 Trochodendron aralioides HOM05D005505 ORTHO05D006974 5.1e-112 409.1 508 46.1
QL09p050425 Quercus lobata HOM05D005505 ORTHO05D006974 8.8e-112 408.3 500 46.4
Prupe.5G110900 Prunus persica HOM05D005505 ORTHO05D006974 1.1e-111 407.9 498 46.8
RcHm_v2.0_Chr7g0196051 Rosa chinensis HOM05D005505 ORTHO05D006974 1.3e-110 404.4 499 46.3
SpUn0001_0240 Schrenkiella parvula HOM05D005505 ORTHO05D006974 1.3e-110 404.4 484 51.0
TPR.G26848 Trifolium pratense HOM05D005505 ORTHO05D006974 8.2e-110 401.7 497 45.9
Cpa.g.sc59.105 Carica papaya HOM05D005505 ORTHO05D006974 1.8e-109 400.6 593 41.7
FAN13G1424 Fragaria x ananassa HOM05D005505 ORTHO05D006974 1.8e-109 400.6 507 45.4
Actinidia35954 Actinidia chinensis HOM05D005505 ORTHO05D006974 4.1e-109 399.4 507 46.4
FAN18G0472 Fragaria x ananassa HOM05D005505 ORTHO05D006974 6.9e-109 398.7 493 45.8
MBI10_g16825_MAGBIO Magnolia biondii HOM05D005505 ORTHO05D006974 1.2e-108 397.9 522 45.6
TWI53G0062 Tripterygium wilfordii HOM05D005505 ORTHO05D006974 1.5e-108 397.5 503 46.1
CAN.G500.70 Capsicum annuum HOM05D005505 ORTHO05D006974 4.5e-108 396.0 498 46.2
Medtr2g060550 Medicago truncatula HOM05D005505 ORTHO05D006974 4.5e-108 396.0 496 44.8
Solyc09g091570.2 Solanum lycopersicum HOM05D005505 ORTHO05D006974 5.9e-108 395.6 498 46.4
Sopen09g034490 Solanum pennellii HOM05D005505 ORTHO05D006974 5.9e-108 395.6 498 46.4
FvH4_5g03680 Fragaria vesca HOM05D005505 ORTHO05D006974 2.2e-107 393.7 507 45.0
Nn8g40056 Nelumbo nucifera HOM05D005505 ORTHO05D006974 2.2e-107 393.7 514 44.9
CANSAT21G2364 Cannabis sativa HOM05D005505 ORTHO05D006974 2.9e-107 393.3 500 45.4
FAN13G2718 Fragaria x ananassa HOM05D005505 ORTHO05D006974 2.9e-107 393.3 515 44.7
HanXRQChr10g0278391 Helianthus annuus HOM05D005505 ORTHO05D006974 2.9e-107 393.3 495 45.7
PGR142G3770 Punica granatum HOM05D005505 ORTHO05D006974 2.9e-107 393.3 496 45.8
Psat7g176120 Pisum sativum HOM05D005505 ORTHO05D006974 5.0e-107 392.5 496 44.4
SalBow2G0189 Salvia bowleyana HOM05D005505 ORTHO05D006974 8.5e-107 391.7 493 45.4
ECA233G0503 Erigeron canadensis HOM05D005505 ORTHO05D006974 1.1e-106 391.3 504 45.4
Lalb_Chr19g0126031 Lupinus albus HOM05D005505 ORTHO05D006974 2.5e-106 390.2 512 43.9
Sed0009691 Sechium edule HOM05D005505 ORTHO05D006974 4.2e-106 389.4 510 45.5
Lalb_Chr03g0041191 Lupinus albus HOM05D005505 ORTHO05D006974 5.5e-106 389.0 495 44.0
FAN08G1440 Fragaria x ananassa HOM05D005505 ORTHO05D006974 9.4e-106 388.3 515 44.3
Psat3g151840 Pisum sativum HOM05D005505 ORTHO05D006974 9.4e-106 388.3 496 44.0
Glyma.08G345200 Glycine max HOM05D005505 ORTHO05D006974 1.6e-105 387.5 497 45.1
Rhsim09G0051500 Rhododendron simsii HOM05D005505 ORTHO05D006974 1.6e-105 387.5 567 41.8
Ca_07402_v3 Cicer arietinum L. HOM05D005505 ORTHO05D006974 6.1e-105 385.6 496 43.3
Cc03_g07370 Coffea canephora HOM05D005505 ORTHO05D006974 6.1e-105 385.6 494 44.7
Sabra01G0035800 Salix brachista HOM05D005505 ORTHO05D006974 6.1e-105 385.6 474 45.6
Eucgr.H00086 Eucalyptus grandis HOM05D005505 ORTHO05D006974 7.9e-105 385.2 495 44.8
PSO017G4123 Papaver somniferum HOM05D005505 ORTHO05D006974 1.0e-104 384.8 505 44.2
MD06G1096300 Malus domestica HOM05D005505 ORTHO05D006974 2.3e-104 383.6 505 44.4
Lsat_1_v5_gn_2_43080 Lactuca sativa HOM05D005505 ORTHO05D006974 3.0e-104 383.3 494 45.7
Lj1g0020537 Lotus japonicus HOM05D005505 ORTHO05D006974 3.9e-104 382.9 496 44.2
MSTRG.9830 Avicennia marina HOM05D005505 ORTHO05D006974 6.7e-104 382.1 493 45.8
Phvul.008G135500 Phaseolus vulgaris HOM05D005505 ORTHO05D006974 6.7e-104 382.1 496 45.0
PSO063G3796 Papaver somniferum HOM05D005505 ORTHO05D006974 4.4e-103 379.4 505 43.4
Sc24g0002560 Simmondsia chinensis HOM05D005505 ORTHO05D006974 9.7e-103 378.3 499 45.3
AUR62001295 Chenopodium quinoa HOM05D005505 ORTHO05D006974 6.3e-102 375.6 505 44.6
SGA_v2.0_scaffold57G20149 Striga asiatica HOM05D005505 ORTHO05D006974 6.3e-102 375.6 510 43.9
AUR62025680 Chenopodium quinoa HOM05D005505 ORTHO05D006974 8.2e-102 375.2 507 44.0
Lj3C565G3 Lonicera japonica HOM05D005505 ORTHO05D006974 1.1e-101 374.8 478 45.2
Nitab4.5_0000306g0020 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.1e-101 374.8 512 43.8
Nitab4.5_0004881g0030 Nicotiana tabacum HOM05D005505 ORTHO05D006974 1.4e-101 374.4 512 43.8
Lj5g0018216 Lotus japonicus HOM05D005505 ORTHO05D006974 2.4e-101 373.6 496 43.3
Hund05658 Selenicereus undatus HOM05D005505 ORTHO05D006974 2.4e-101 373.6 504 45.2
Aqoxy2G03778 Aquilegia oxysepala HOM05D005505 ORTHO05D006974 1.2e-100 371.3 489 45.2
PGSC0003DMG400029626 Solanum tuberosum HOM05D005505 ORTHO05D006974 1.2e-100 371.3 470 46.0
Migut.G00632 Erythranthe guttata HOM05D005505 ORTHO05D006974 2.6e-100 370.2 507 43.8
Medtr7g051960 Medicago truncatula HOM05D005505 ORTHO05D006974 2.6e-100 370.2 472 44.1
Dinv38263 Davidia involucrata HOM05D005505 ORTHO05D006974 1.0e-99 368.2 453 47.5
SGA_v2.0_scaffold380G50374 Striga asiatica HOM05D005505 ORTHO05D006974 1.1e-98 364.8 508 42.9
EL10Ac7g18096 Beta vulgaris HOM05D005505 ORTHO05D006974 1.5e-98 364.4 502 43.8
Peaxi162Scf00047g01039 Petunia axillaris HOM05D005505 ORTHO05D006974 5.5e-98 362.5 498 43.2
ATR0787G156 Amborella trichopoda HOM05D005505 ORTHO05D006974 9.4e-98 361.7 518 41.7
FAN04G0744 Fragaria x ananassa HOM05D005505 ORTHO05D006974 5.2e-96 355.9 507 41.8
FAN04G1715 Fragaria x ananassa HOM05D005505 ORTHO05D006974 5.2e-96 355.9 507 41.8
GSVIVG01012536001 Vitis vinifera HOM05D005505 ORTHO05D006974 2.6e-95 353.6 506 42.7
Oeu026858.1 Olea europaea HOM05D005505 ORTHO05D006974 3.7e-94 349.7 498 43.8
Zm00001eb211070 Zea mays HOM05D005505 ORTHO05D006974 1.4e-93 347.8 502 41.0
MD14G1116500 Malus domestica HOM05D005505 ORTHO05D006974 2.4e-93 347.1 449 43.9
unitig_32.g10868 Utricularia gibba HOM05D005505 ORTHO05D006974 9.1e-93 345.1 499 41.1
Duzib151G0717 Durio zibethinus HOM05D005505 ORTHO05D006974 1.2e-92 344.7 513 41.9
Lj3A577G5 Lonicera japonica HOM05D005505 ORTHO05D006974 4.5e-92 342.8 552 39.7
Os03g0839100 Oryza sativa ssp. japonica HOM05D005505 ORTHO05D006974 2.5e-90 337.0 498 40.6
SHI00938 Sapria himalayana HOM05D005505 ORTHO05D006974 5.2e-88 329.3 499 39.7
AL3G39020 Arabidopsis lyrata HOM05D005505 ORTHO05D006974 1.0e-83 315.1 205 79.0
Haze_11578 Corylus avellana HOM05D005505 ORTHO05D006974 4.7e-81 306.2 404 44.1
Lj3A578G8 Lonicera japonica HOM05D005505 ORTHO05D006974 8.0e-81 305.4 406 44.3
arahy.Tifrunner.gnm1.ann1.NU2AG4 Arachis hypogaea HOM05D005505 ORTHO05D006974 8.3e-78 295.4 449 40.3
Lj3A579T16 Lonicera japonica HOM05D005505 ORTHO05D006974 1.6e-76 291.2 431 40.8
SEGI_35699 Sequoiadendron giganteum HOM05D005505 ORTHO05D006974 1.5e-74 284.6 507 35.7
BolC5t35086H Brassica oleracea HOM05D005505 ORTHO05D006974 1.2e-73 281.6 187 79.1
CDE02G0375 Ceratophyllum demersum HOM05D005505 ORTHO05D006974 1.2e-68 265.0 422 38.9
Mapoly0028s0013 Marchantia polymorpha HOM05D005505 ORTHO05D006974 3.4e-63 246.9 539 32.5
SMO351G0576 Selaginella moellendorffii HOM05D005505 ORTHO05D006974 3.6e-57 226.9 486 33.1
Pp3c26_12110 Physcomitrium patens HOM05D005505 ORTHO05D006974 6.8e-56 222.6 500 32.8
Lj3A580T64 Lonicera japonica HOM05D005505 ORTHO05D006974 4.6e-52 209.9 388 37.6
Gohir.D09G197033 Gossypium hirsutum HOM05D005505 ORTHO05D006974 1.5e-50 204.9 179 58.7
HPP92_019865 Vanilla planifolia HOM05D005505 ORTHO05D006974 4.7e-49 199.9 383 37.1
CAN.G220.36 Capsicum annuum HOM05D005505 ORTHO05D006974 8.4e-46 189.1 370 39.7
Lj3A565G17 Lonicera japonica HOM05D005505 ORTHO05D006974 3.9e-43 180.3 356 35.4
MCO15G051 Micromonas commoda HOM05D005505 ORTHO05D006974 3.1e-32 144.1 522 26.6
PRCOL_00000308 Prasinoderma coloniale HOM05D005505 ORTHO05D006974 4.6e-28 130.2 405 27.9
Cre02.g112850 Chlamydomonas reinhardtii HOM05D005505 ORTHO05D006974 5.1e-27 126.7 505 25.1
Lj3A566G16 Lonicera japonica HOM05D005505 ORTHO05D006974 1.6e-25 121.7 212 37.7
CBR_g34015 Chara braunii HOM05D005505 ORTHO05D006974 2.2e-22 111.3 220 32.3
Cfa022008 Carpinus fangiana HOM05D005505 ORTHO05D006974 2.1e-17 94.7 518 22.6
CBR_g34017 Chara braunii HOM05D005505 ORTHO05D006974 1.8e-16 91.7 133 37.6
Haze_11577 Corylus avellana HOM05D005505 ORTHO05D006974 1.8e-16 91.7 82 58.5
AL3G39220 Arabidopsis lyrata HOM05D005505 ORTHO05D000101 4.3e-10 70.5 52 67.3
Actinidia34626 Actinidia chinensis HOM05D005505 ORTHO05D006974 2.8e-09 67.8 68 57.4
Lj3A579T17 Lonicera japonica HOM05D005505 ORTHO05D006974 4.1e-08 63.9 53 62.3
Lj3A578G7 Lonicera japonica HOM05D005505 ORTHO05D006974 2.2e-06 58.2 56 53.6


User provided reference genes

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