Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 4.0e-184 647.9 316 100.0
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 1.2e-26 124.8 209 32.5
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 8.5e-25 118.6 196 35.2
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 6.1e-23 112.5 194 33.0
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 2.0e-21 107.5 199 33.7
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 3.7e-20 103.2 99 47.5
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-19 101.3 99 46.5
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 3.5e-18 96.7 143 37.1
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 4.5e-18 96.3 191 30.9
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 3.8e-17 93.2 143 35.7
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 6.5e-17 92.4 222 29.3
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 6.5e-17 92.4 206 30.6
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 5.5e-16 89.4 203 30.0
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 2.1e-15 87.4 206 28.6
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-14 85.1 219 29.2
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-14 85.1 144 35.4
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 4.0e-14 83.2 142 35.9
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 2.6e-13 80.5 100 42.0
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 9.8e-13 78.6 97 36.1
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 9.8e-13 78.6 95 36.8
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 1.3e-12 78.2 96 35.4
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 1.3e-12 78.2 96 35.4
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 6.3e-12 75.9 96 36.5
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-11 75.1 96 35.4
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 1.1e-11 75.1 96 35.4
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 1.4e-11 74.7 96 35.4
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 1.8e-11 74.3 96 36.5
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 2.4e-11 73.9 96 35.4
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.1e-11 73.6 96 36.5
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 3.1e-11 73.6 96 34.4
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 4.1e-11 73.2 96 36.5
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 7.0e-11 72.4 96 34.4
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 7.0e-11 72.4 96 34.4
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 7.0e-11 72.4 96 34.4
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 9.1e-11 72.0 96 34.4
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.2e-10 71.6 95 32.6
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 2.0e-10 70.9 96 33.3
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 2.7e-10 70.5 96 34.4
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 3.5e-10 70.1 96 35.4
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 5.9e-10 69.3 108 31.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 7.7e-10 68.9 95 32.6
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 1.0e-09 68.6 95 32.6
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 1.7e-09 67.8 100 33.0
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 2.3e-09 67.4 96 31.2
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 2.3e-09 67.4 96 32.3
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 3.8e-09 66.6 95 31.6
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 5.0e-09 66.2 95 30.5
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 5.0e-09 66.2 95 32.6
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 6.6e-09 65.9 95 31.6
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 8.6e-09 65.5 95 34.7
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 1.1e-08 65.1 100 36.0
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 2.5e-08 63.9 96 32.3
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 2.5e-08 63.9 95 30.5
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 2.5e-08 63.9 95 30.5
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 3.3e-08 63.5 94 28.7
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 4.2e-08 63.2 100 38.0
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 4.2e-08 63.2 96 29.2
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 4.2e-08 63.2 95 30.5
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 4.2e-08 63.2 96 29.2
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 4.2e-08 63.2 95 30.5
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 5.6e-08 62.8 85 29.4
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 5.6e-08 62.8 60 48.3
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 5.6e-08 62.8 85 30.6
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 7.2e-08 62.4 96 28.1
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 1.2e-07 61.6 94 28.7
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 1.2e-07 61.6 192 28.1
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 1.2e-07 61.6 94 26.6
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 2.1e-07 60.8 94 26.6
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 4.7e-07 59.7 95 31.6
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 4.7e-07 59.7 93 28.0
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 4.7e-07 59.7 95 31.6
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 8.0e-07 58.9 58 37.9
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 8.0e-07 58.9 62 43.5
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 8.0e-07 58.9 95 31.6
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 1.4e-06 58.2 85 28.2
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.4e-06 58.2 96 31.2
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 3.0e-06 57.0 96 27.1
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 4.0e-06 56.6 95 31.6
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 4.0e-06 56.6 97 29.9
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 4.0e-06 56.6 96 27.1


User provided reference genes

Program Settings