Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 8.8e-204 713.4 357 100.0
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 1.5e-174 616.3 361 87.0
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 3.3e-166 588.6 360 81.9
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 2.1e-165 585.9 362 83.1
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 3.2e-153 545.4 327 84.4
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 9.3e-153 543.9 354 78.8
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 1.7e-151 539.7 362 78.2
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.1e-145 520.4 348 78.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.9e-145 519.6 345 78.0
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 2.4e-145 519.2 347 77.8
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 5.5e-129 464.9 362 69.1
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 2.3e-119 433.0 371 62.0
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 6.1e-104 381.7 355 54.9
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 5.7e-102 375.2 318 57.9
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 9.7e-102 374.4 323 58.2
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 2.2e-101 373.2 292 62.3
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 6.3e-101 371.7 292 59.6
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 3.1e-100 369.4 356 52.5
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 9.1e-100 367.9 365 55.1
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 3.5e-99 365.9 380 52.6
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.0e-98 364.4 369 51.5
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.7e-98 363.6 317 57.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 3.8e-98 362.5 366 51.9
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.8e-98 362.5 322 56.2
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 8.5e-98 361.3 293 59.7
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.5e-97 360.5 293 59.7
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 4.2e-97 359.0 300 58.7
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 7.2e-97 358.2 291 59.5
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 9.4e-97 357.8 330 55.2
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 9.4e-97 357.8 293 59.4
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.2e-96 357.5 362 52.5
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 2.7e-96 356.3 328 54.0
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 1.4e-95 354.0 343 53.4
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.4e-95 354.0 316 53.5
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 2.3e-95 353.2 286 58.7
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.2e-94 350.9 311 59.8
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.5e-94 350.5 318 52.2
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 1.5e-94 350.5 286 59.1
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 1.5e-94 350.5 332 51.8
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 3.4e-94 349.4 373 49.9
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 3.4e-94 349.4 291 58.4
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 5.7e-94 348.6 285 58.6
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 5.7e-94 348.6 290 57.6
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 9.8e-94 347.8 331 53.8
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.3e-93 347.4 295 58.0
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.1e-92 344.4 320 52.8
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 3.1e-92 342.8 293 56.3
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 3.1e-92 342.8 295 56.6
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 4.1e-92 342.4 334 50.6
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 5.4e-92 342.0 292 55.5
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 7.0e-92 341.7 311 54.0
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 2.7e-91 339.7 312 53.8
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 2.7e-91 339.7 276 60.5
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 4.5e-91 339.0 312 53.5
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 7.7e-91 338.2 288 56.6
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 1.0e-90 337.8 351 50.1
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 3.8e-90 335.9 360 48.3
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 1.5e-89 334.0 325 52.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 2.5e-89 333.2 286 55.2
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 4.2e-89 332.4 344 50.9
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 4.2e-89 332.4 306 56.5
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 5.5e-89 332.0 320 53.8
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 9.5e-89 331.3 315 54.0
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 1.2e-88 330.9 278 59.7
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 1.2e-88 330.9 331 53.5
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 2.1e-88 330.1 320 53.4
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 8.0e-88 328.2 282 56.7
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 1.0e-87 327.8 271 60.9
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 1.4e-87 327.4 320 54.1
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 5.2e-87 325.5 289 55.4
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 1.5e-86 323.9 303 53.5
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.5e-86 323.9 278 58.3
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 4.4e-86 322.4 309 52.4
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 4.4e-86 322.4 288 55.2
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 1.4e-84 317.4 337 48.1
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 4.5e-83 312.4 307 52.4
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 7.8e-83 311.6 322 49.7
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.0e-82 311.2 314 51.0
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 1.3e-82 310.8 287 51.9
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 6.6e-82 308.5 369 48.5
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.5e-81 306.6 370 48.6
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.4e-79 300.8 341 48.7
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 4.0e-79 299.3 312 49.0
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 3.7e-77 292.7 233 61.8
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 3.7e-77 292.7 317 47.0
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 5.4e-76 288.9 284 52.8
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.0e-71 274.6 363 42.4
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.4e-71 274.2 327 47.7
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 1.4e-68 264.2 233 54.9
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 2.4e-68 263.5 236 55.9
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 2.7e-67 260.0 255 52.9
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 2.8e-64 250.0 245 60.8
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.1e-52 211.5 336 38.4
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 1.6e-51 207.6 326 35.9
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.9e-45 186.8 307 35.8
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 1.2e-43 181.4 294 33.3
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.3e-42 177.9 297 35.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 2.3e-42 177.2 223 43.0
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 6.6e-42 175.6 151 55.6
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.4e-37 159.1 158 51.3
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 3.1e-31 140.2 85 75.3
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.0e-30 137.5 169 46.2
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 3.2e-28 130.2 101 61.4
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.9e-23 112.5 134 49.3
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 4.9e-21 106.3 270 29.3
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 1.6e-16 91.3 271 27.7
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.0e-14 84.3 87 52.9
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.2e-12 77.0 130 38.5
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.5e-06 58.2 67 46.3


User provided reference genes

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