Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 1.8e-81 305.8 154 100.0
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 2.5e-62 242.3 154 83.1
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 8.0e-53 210.7 158 76.6
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 1.6e-48 196.4 153 73.9
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 6.0e-48 194.5 151 71.5
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.1e-46 190.3 157 68.2
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 1.1e-46 190.3 156 69.9
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 8.1e-45 184.1 148 75.7
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 3.1e-44 182.2 149 74.5
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.6e-43 179.1 148 74.3
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 5.8e-43 177.9 148 73.6
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 7.5e-43 177.6 148 73.6
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 3.2e-41 172.2 149 72.5
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.2e-32 143.7 150 56.0
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 4.3e-30 135.2 161 50.9
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.2e-27 127.1 159 50.3
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 2.0e-27 126.3 169 48.5
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 2.0e-27 126.3 159 50.3
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 5.8e-27 124.8 92 70.7
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 7.6e-27 124.4 158 47.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 3.8e-26 122.1 93 67.7
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 8.4e-26 120.9 161 47.8
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 8.4e-26 120.9 152 47.4
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.9e-25 119.8 167 49.1
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 4.2e-25 118.6 161 43.5
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 4.2e-25 118.6 161 43.5
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 9.3e-25 117.5 92 66.3
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 9.3e-25 117.5 159 47.8
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.2e-24 117.1 163 48.5
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 1.6e-24 116.7 160 46.2
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 3.5e-24 115.5 86 66.3
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 3.5e-24 115.5 148 48.6
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 7.8e-24 114.4 97 59.8
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 7.8e-24 114.4 165 45.5
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.7e-23 113.2 168 43.5
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.7e-23 113.2 166 47.0
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 2.3e-23 112.8 164 43.9
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 5.1e-23 111.7 168 44.0
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 8.7e-23 110.9 83 66.3
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.5e-22 110.2 159 42.8
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 7.3e-22 107.8 95 57.9
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 7.3e-22 107.8 158 42.4
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 9.6e-22 107.5 160 43.8
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.3e-21 107.1 111 50.5
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 1.6e-21 106.7 106 53.8
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 2.8e-21 105.9 141 46.1
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 2.8e-21 105.9 92 59.8
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 3.6e-21 105.5 79 64.6
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 4.8e-21 105.1 91 61.5
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 1.1e-20 104.0 78 66.7
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.1e-20 104.0 78 66.7
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.1e-20 104.0 92 59.8
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 2.4e-20 102.8 83 60.2
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 2.4e-20 102.8 83 61.4
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 3.1e-20 102.4 80 61.2
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 4.0e-20 102.1 162 41.4
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 4.0e-20 102.1 144 43.1
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 4.0e-20 102.1 132 46.2
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 4.0e-20 102.1 120 50.0
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 5.3e-20 101.7 71 69.0
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 6.9e-20 101.3 148 44.6
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 9.0e-20 100.9 98 53.1
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-19 100.5 76 67.1
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 1.2e-19 100.5 99 54.5
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 2.0e-19 99.8 92 56.5
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 2.6e-19 99.4 86 57.0
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 2.6e-19 99.4 80 61.2
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 2.6e-19 99.4 78 61.5
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 4.4e-19 98.6 78 64.1
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 4.4e-19 98.6 81 59.3
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 5.8e-19 98.2 85 62.4
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.3e-18 97.1 76 61.8
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 1.3e-18 97.1 74 68.9
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 2.2e-18 96.3 147 40.8
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 2.9e-18 95.9 83 62.7
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 3.8e-18 95.5 80 57.5
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 3.8e-18 95.5 80 57.5
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 4.9e-18 95.1 76 64.5
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.1e-17 94.0 90 55.6
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.4e-17 93.6 85 55.3
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 4.2e-17 92.0 85 55.3
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.2e-17 92.0 112 46.4
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 4.2e-17 92.0 144 40.3
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 5.4e-17 91.7 144 40.3
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 7.1e-17 91.3 159 39.0
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 1.0e-15 87.4 78 61.5
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 8.7e-15 84.3 143 39.9
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 2.5e-14 82.8 69 65.2
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.3e-13 80.5 130 42.3
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.6e-13 80.1 103 47.6
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.8e-12 76.6 129 34.1
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 3.4e-11 72.4 123 33.3
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 1.7e-10 70.1 66 60.6
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 2.9e-10 69.3 86 46.5
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.9e-09 66.6 47 57.4
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 7.1e-09 64.7 93 38.7
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 3.5e-08 62.4 43 60.5
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 5.1e-07 58.5 39 61.5
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 2.5e-06 56.2 75 41.3
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 7.4e-06 54.7 106 29.2


User provided reference genes

Program Settings