Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 6.8e-141 504.2 297 100.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.6e-113 413.3 297 79.8
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 5.2e-109 398.3 296 84.1
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.8e-107 392.1 297 80.1
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.4e-106 390.2 297 82.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.9e-103 379.8 297 78.5
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.7e-102 375.2 297 76.1
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.3e-99 367.1 297 82.2
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 3.9e-96 355.5 297 74.7
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 3.9e-96 355.5 297 74.7
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 6.0e-89 331.6 274 78.8
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.4e-77 293.9 296 70.3
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 5.9e-60 235.3 312 52.6
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 9.7e-47 191.4 257 52.1
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.2e-46 190.3 252 52.0
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.4e-45 186.8 255 49.8
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.8e-43 179.5 254 47.6
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 9.4e-42 174.9 253 54.5
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.7e-41 172.6 256 51.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.3e-40 170.2 175 61.7
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 5.2e-40 169.1 309 49.8
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.5e-39 167.5 284 45.8
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 4.4e-39 166.0 315 41.9
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.7e-38 164.1 282 45.7
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.7e-38 164.1 294 45.2
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 2.8e-38 163.3 252 47.2
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 6.3e-38 162.2 250 48.0
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 8.3e-38 161.8 251 47.0
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.8e-37 160.6 140 66.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.4e-37 160.2 246 45.9
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.4e-37 160.2 246 45.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 4.1e-37 159.5 281 50.5
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 5.3e-37 159.1 311 42.4
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 7.0e-37 158.7 163 58.9
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 9.1e-37 158.3 272 46.3
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.2e-36 157.9 302 43.0
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 2.0e-36 157.1 187 54.0
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 5.9e-36 155.6 177 55.4
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 7.7e-36 155.2 143 61.5
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.0e-35 154.8 178 56.2
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.7e-35 154.1 140 64.3
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.2e-35 153.7 148 62.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.9e-35 153.3 151 58.9
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.9e-35 153.3 179 55.3
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 3.8e-35 152.9 176 55.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 6.5e-35 152.1 176 54.5
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 6.5e-35 152.1 179 54.7
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 6.5e-35 152.1 179 54.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 8.5e-35 151.8 185 55.7
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.1e-34 151.4 152 61.2
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.1e-34 151.4 156 59.0
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 4.2e-34 149.4 112 81.2
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 4.2e-34 149.4 285 43.2
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.5e-34 149.1 129 63.6
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 7.2e-34 148.7 177 52.5
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 7.2e-34 148.7 268 47.8
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 1.2e-33 147.9 260 42.3
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.1e-33 147.1 152 57.2
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.1e-33 147.1 143 62.2
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 2.1e-33 147.1 251 44.6
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.7e-33 146.0 257 40.9
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 6.1e-33 145.6 139 60.4
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.4e-32 144.4 141 59.6
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.8e-32 144.1 172 52.9
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 1.8e-32 144.1 142 58.5
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-32 144.1 142 58.5
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.3e-32 143.7 144 61.1
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 3.0e-32 143.3 151 56.3
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.0e-32 143.3 178 49.4
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.0e-32 142.9 141 57.4
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.2e-32 142.5 142 58.5
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 5.2e-32 142.5 174 51.1
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 6.8e-32 142.1 296 42.2
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 6.8e-32 142.1 292 45.2
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.5e-31 141.0 140 60.0
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.5e-31 141.0 156 56.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 2.0e-31 140.6 182 52.7
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 2.0e-31 140.6 257 47.9
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 2.0e-31 140.6 302 39.4
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 3.4e-31 139.8 105 71.4
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 4.4e-31 139.4 110 65.5
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 4.4e-31 139.4 146 54.8
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 7.5e-31 138.7 140 57.1
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 7.5e-31 138.7 188 52.1
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 9.8e-31 138.3 252 41.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 9.8e-31 138.3 299 39.5
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.7e-30 137.5 149 57.0
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.7e-30 137.5 177 50.8
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 3.7e-30 136.3 152 54.6
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 4.8e-30 136.0 306 42.8
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 6.3e-30 135.6 165 50.9
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 8.3e-30 135.2 279 41.9
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 1.4e-29 134.4 135 55.6
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 4.1e-29 132.9 289 45.0
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 5.4e-29 132.5 277 38.6
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.2e-28 131.3 183 50.8
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.6e-28 131.0 307 42.3
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.0e-28 130.6 339 40.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.7e-28 130.2 133 57.9
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 3.5e-28 129.8 261 41.0
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 5.9e-28 129.0 178 47.2
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.9e-26 124.0 119 58.8
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.5e-23 114.4 174 46.6
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.9e-19 100.1 129 53.5
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 8.9e-16 88.6 146 41.8
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 3.4e-15 86.7 143 40.6
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.3e-14 84.7 110 43.6
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-13 81.3 95 51.6
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 1.4e-13 81.3 94 52.1
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.9e-13 80.9 116 43.1
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.2e-13 80.1 93 52.7
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 4.1e-13 79.7 136 36.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.2e-12 78.2 55 70.9
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.6e-12 76.3 57 66.7
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.6e-12 76.3 57 66.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-11 74.7 58 63.8
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 4.3e-10 69.7 205 42.0
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 9.5e-10 68.6 45 77.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 9.5e-10 68.6 50 70.0
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 4.7e-09 66.2 79 55.7


User provided reference genes

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