Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g35360 Schrenkiella parvula HOM05D009364 ORTHO05D004599 2.4e-60 235.3 122 100.0
A08p22730 Brassica napus HOM05D009364 ORTHO05D004599 1.5e-46 189.5 123 82.1
BraA08t34242Z Brassica rapa HOM05D009364 ORTHO05D004599 1.5e-46 189.5 123 82.1
C03p79220 Brassica napus HOM05D009364 ORTHO05D004599 8.3e-45 183.7 123 80.5
BcaC01g00392 Brassica carinata HOM05D009364 ORTHO05D004599 4.1e-44 181.4 123 79.7
BolC3t20164H Brassica oleracea HOM05D009364 ORTHO05D004599 4.1e-44 181.4 123 79.7
BcaNung02084 Brassica carinata HOM05D009364 ORTHO05D004599 1.5e-41 172.9 115 80.0
BcaB03g12334 Brassica carinata HOM05D009364 ORTHO05D004599 7.3e-41 170.6 110 85.5
BcaC06g33374 Brassica carinata HOM05D009364 ORTHO05D004599 2.8e-40 168.7 115 78.3
C07p62590 Brassica napus HOM05D009364 ORTHO05D004599 2.8e-40 168.7 115 78.3
BolC7t46674H Brassica oleracea HOM05D009364 ORTHO05D004599 2.8e-40 168.7 115 78.3
Thhalv10027223m.g Eutrema salsugineum HOM05D009364 ORTHO05D004599 6.2e-40 167.5 127 75.6
AT4G37710 Arabidopsis thaliana HOM05D009364 ORTHO05D004599 8.1e-40 167.2 125 77.6
A03p65490 Brassica napus HOM05D009364 ORTHO05D004599 1.1e-39 166.8 115 77.4
BraA03t15601Z Brassica rapa HOM05D009364 ORTHO05D004599 1.1e-39 166.8 115 77.4
AL7G12970 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 3.1e-39 165.2 127 76.4
Carub.0007s0254 Capsella rubella HOM05D009364 ORTHO05D004599 6.6e-34 147.5 123 70.7
CARHR246100 Cardamine hirsuta HOM05D009364 ORTHO05D004599 8.6e-34 147.1 118 71.2
CARHR114200 Cardamine hirsuta HOM05D009364 ORTHO05D004599 3.2e-20 102.1 133 51.1
AL4G12470 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 3.0e-18 95.5 131 51.1
AL3G48200 Arabidopsis lyrata HOM05D009364 ORTHO05D004599 5.1e-18 94.7 131 50.4
Sp4g01930 Schrenkiella parvula HOM05D009364 ORTHO05D004599 1.5e-17 93.2 145 46.2
Thhalv10000717m.g Eutrema salsugineum HOM05D009364 ORTHO05D004599 1.9e-17 92.8 131 51.1
Carub.0004s0201 Capsella rubella HOM05D009364 ORTHO05D004599 6.2e-16 87.8 131 47.3
AT2G22880 Arabidopsis thaliana HOM05D009364 ORTHO05D004599 8.1e-16 87.4 114 50.0
A09p57200 Brassica napus HOM05D009364 ORTHO05D004599 1.1e-15 87.0 147 44.9
BraA09t41113Z Brassica rapa HOM05D009364 ORTHO05D004599 1.1e-15 87.0 147 44.9
C08p40200 Brassica napus HOM05D009364 ORTHO05D004599 6.4e-13 77.8 145 42.8
BolC8t51591H Brassica oleracea HOM05D009364 ORTHO05D004599 6.4e-13 77.8 145 42.8
BcaC07g41018 Brassica carinata HOM05D009364 ORTHO05D004599 5.4e-12 74.7 128 43.8
THA.LOC104804211 Tarenaya hassleriana HOM05D009364 ORTHO05D004599 1.3e-10 70.1 133 44.4
Aa31LG7G13930 Aethionema arabicum HOM05D009364 ORTHO05D004599 6.7e-10 67.8 96 45.8
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.0e-07 58.5 61 54.1
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.2e-06 57.0 55 54.5
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 1.5e-06 56.6 96 35.4
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 1.5e-06 56.6 77 44.2
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.5e-06 56.6 50 50.0
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 2.0e-06 56.2 48 54.2
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 2.6e-06 55.8 70 44.3
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 2.6e-06 55.8 85 43.5
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 3.4e-06 55.5 52 53.8
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 4.5e-06 55.1 60 48.3
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 4.5e-06 55.1 50 56.0
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 5.8e-06 54.7 77 40.3
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 5.8e-06 54.7 60 48.3
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 5.8e-06 54.7 63 46.0


User provided reference genes

Program Settings