Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g34760 Schrenkiella parvula HOM05D004996 ORTHO05D005844 7.8e-175 617.1 322 100.0
Thhalv10025731m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 1.5e-154 549.7 323 89.8
CARHR245500 Cardamine hirsuta HOM05D004996 ORTHO05D005844 4.2e-152 541.6 322 87.3
AL7G13770 Arabidopsis lyrata HOM05D004996 ORTHO05D005844 3.3e-149 531.9 326 87.4
Carub.0007s0320 Capsella rubella HOM05D004996 ORTHO05D005844 2.4e-147 525.8 325 86.5
AT4G37000 Arabidopsis thaliana HOM05D004996 ORTHO05D005844 2.6e-146 522.3 324 87.0
A01p01870 Brassica napus HOM05D004996 ORTHO05D005844 3.4e-146 521.9 320 85.0
C01p02010 Brassica napus HOM05D004996 ORTHO05D005844 1.7e-145 519.6 321 85.4
BraA01t00176Z Brassica rapa HOM05D004996 ORTHO05D005844 4.2e-144 515.0 320 84.7
Thhalv10027846m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 2.1e-143 512.7 324 84.0
Thhalv10027845m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 3.9e-142 508.4 324 83.6
BolC1t00195H Brassica oleracea HOM05D004996 ORTHO05D005844 2.4e-139 499.2 355 76.6
Aa31LG6G13970 Aethionema arabicum HOM05D004996 ORTHO05D005844 3.8e-137 491.9 322 80.1
BcaNung02518 Brassica carinata HOM05D004996 ORTHO05D005844 4.3e-133 478.4 324 79.9
THA.LOC104807582 Tarenaya hassleriana HOM05D004996 ORTHO05D005844 7.9e-103 377.9 320 63.1
Sabra07G0038500 Salix brachista HOM05D004996 ORTHO05D005844 4.7e-87 325.5 324 54.0
Manes.13G124600 Manihot esculenta HOM05D004996 ORTHO05D005844 3.4e-85 319.3 322 54.0
Potri.007G043600 Populus trichocarpa HOM05D004996 ORTHO05D005844 3.4e-85 319.3 326 53.4
RcHm_v2.0_Chr1g0334851 Rosa chinensis HOM05D004996 ORTHO05D005844 9.8e-85 317.8 321 54.2
Lj7A69G43 Lonicera japonica HOM05D004996 ORTHO05D005844 3.7e-84 315.8 277 58.5
Cfa004020 Carpinus fangiana HOM05D004996 ORTHO05D005844 1.1e-83 314.3 321 52.3
Lsat_1_v5_gn_2_84140 Lactuca sativa HOM05D004996 ORTHO05D005844 1.2e-82 310.8 266 58.6
Prupe.7G133700 Prunus persica HOM05D004996 ORTHO05D005844 2.0e-82 310.1 326 51.8
TWI73G1146 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 2.7e-82 309.7 326 52.1
Medtr5g096150 Medicago truncatula HOM05D004996 ORTHO05D005844 3.5e-82 309.3 313 53.0
QL06p041440 Quercus lobata HOM05D004996 ORTHO05D005844 3.5e-82 309.3 273 58.2
VMungo0647G1648 Vigna mungo HOM05D004996 ORTHO05D005844 3.5e-82 309.3 309 54.0
CiPaw.02G008500 Carya illinoinensis HOM05D004996 ORTHO05D005844 1.3e-81 307.4 320 51.6
MD15G1283600 Malus domestica HOM05D004996 ORTHO05D005844 1.3e-81 307.4 327 51.7
FvH4_7g06480 Fragaria vesca HOM05D004996 ORTHO05D005844 2.2e-81 306.6 321 53.0
FAN10G3007 Fragaria x ananassa HOM05D004996 ORTHO05D005844 2.2e-81 306.6 321 53.0
HanXRQChr14g0442821 Helianthus annuus HOM05D004996 ORTHO05D005844 2.2e-81 306.6 269 58.4
Haze_16997 Corylus avellana HOM05D004996 ORTHO05D005844 5.0e-81 305.4 271 56.8
COL.COLO4_11407 Corchorus olitorius HOM05D004996 ORTHO05D005844 8.5e-81 304.7 274 53.6
FAN06G0805 Fragaria x ananassa HOM05D004996 ORTHO05D005844 8.5e-81 304.7 270 58.5
Thecc.01G055400 Theobroma cacao HOM05D004996 ORTHO05D005844 1.1e-80 304.3 324 50.3
LjContig00272g0020566 Lotus japonicus HOM05D004996 ORTHO05D005844 1.5e-80 303.9 273 55.3
Duzib187G0496 Durio zibethinus HOM05D004996 ORTHO05D005844 1.9e-80 303.5 323 49.5
Sc07g0000030 Simmondsia chinensis HOM05D004996 ORTHO05D005844 3.2e-80 302.8 269 56.5
Ciclev10026041m.g Citrus clementina HOM05D004996 ORTHO05D005844 4.2e-80 302.4 321 52.3
Cpa.g.sc55.151 Carica papaya HOM05D004996 ORTHO05D005844 7.2e-80 301.6 325 52.6
Phvul.008G280200 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 7.2e-80 301.6 309 52.8
Rhsim08G0100700 Rhododendron simsii HOM05D004996 ORTHO05D005844 7.2e-80 301.6 342 50.9
LjContig00272g0002438 Lotus japonicus HOM05D004996 ORTHO05D005844 9.4e-80 301.2 273 54.9
GSVIVG01022135001 Vitis vinifera HOM05D004996 ORTHO05D005844 1.6e-79 300.4 271 56.5
Hma1.2p1_0200F.1_g085840 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 2.1e-79 300.1 320 53.8
Hma1.2p1_2839F.1_g329295 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 2.1e-79 300.1 320 53.8
arahy.Tifrunner.gnm1.ann1.X0LXK2 Arachis hypogaea HOM05D004996 ORTHO05D005844 4.7e-79 298.9 282 53.9
Haze_16999 Corylus avellana HOM05D004996 ORTHO05D005844 4.7e-79 298.9 271 55.7
DCAR_021441 Daucus carota HOM05D004996 ORTHO05D005844 6.1e-79 298.5 271 56.8
EL10Ac6g15748 Beta vulgaris HOM05D004996 ORTHO05D005844 8.0e-79 298.1 269 55.8
Eucgr.I00930 Eucalyptus grandis HOM05D004996 ORTHO05D005844 8.0e-79 298.1 302 53.6
Duzib147G0592 Durio zibethinus HOM05D004996 ORTHO05D005844 1.0e-78 297.7 327 48.3
Glyma.14G012500 Glycine max HOM05D004996 ORTHO05D005844 1.0e-78 297.7 326 50.3
Glyma.02G301700 Glycine max HOM05D004996 ORTHO05D005844 1.8e-78 297.0 315 52.1
Oeu004826.1 Olea europaea HOM05D004996 ORTHO05D005844 1.8e-78 297.0 306 50.7
Phvul.008G280300 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 4.0e-78 295.8 273 54.6
MSTRG.23749 Avicennia marina HOM05D004996 ORTHO05D005844 5.2e-78 295.4 274 56.6
CANSAT01G2652 Cannabis sativa HOM05D004996 ORTHO05D005844 5.2e-78 295.4 275 53.8
Ca_05570_v3 Cicer arietinum L. HOM05D004996 ORTHO05D005844 5.2e-78 295.4 322 49.1
Lalb_Chr17g0348991 Lupinus albus HOM05D004996 ORTHO05D005844 8.8e-78 294.7 271 55.0
TAR376G0493 Trochodendron aralioides HOM05D004996 ORTHO05D005844 1.2e-77 294.3 295 52.2
Cc03_g11370 Coffea canephora HOM05D004996 ORTHO05D005844 1.5e-77 293.9 318 48.7
Migut.H00434 Erythranthe guttata HOM05D004996 ORTHO05D005844 1.5e-77 293.9 303 51.5
Gohir.A11G192100 Gossypium hirsutum HOM05D004996 ORTHO05D005844 2.6e-77 293.1 307 50.8
Gohir.D11G198600 Gossypium hirsutum HOM05D004996 ORTHO05D005844 5.7e-77 292.0 324 48.1
PGR004G2460 Punica granatum HOM05D004996 ORTHO05D005844 5.7e-77 292.0 271 53.1
AUR62003879 Chenopodium quinoa HOM05D004996 ORTHO05D005844 9.8e-77 291.2 320 50.9
Ah.02g120540 Amaranthus hybridus HOM05D004996 ORTHO05D005844 2.2e-76 290.0 270 54.4
Psat2g006800 Pisum sativum HOM05D004996 ORTHO05D005844 2.2e-76 290.0 322 50.0
Nitab4.5_0000033g0420 Nicotiana tabacum HOM05D004996 ORTHO05D005844 3.7e-76 289.3 306 49.0
Nitab4.5_0001064g0040 Nicotiana tabacum HOM05D004996 ORTHO05D005844 4.9e-76 288.9 313 48.9
PGSC0003DMG400018987 Solanum tuberosum HOM05D004996 ORTHO05D005844 4.9e-76 288.9 269 52.0
Actinidia16491 Actinidia chinensis HOM05D004996 ORTHO05D005844 6.3e-76 288.5 269 55.0
CAN.G11.7 Capsicum annuum HOM05D004996 ORTHO05D005844 6.3e-76 288.5 304 48.4
ECA238G3150 Erigeron canadensis HOM05D004996 ORTHO05D005844 8.3e-76 288.1 266 56.0
Gorai.007G212700 Gossypium raimondii HOM05D004996 ORTHO05D005844 8.3e-76 288.1 322 48.4
LjContig00081g0020523 Lotus japonicus HOM05D004996 ORTHO05D005844 1.1e-75 287.7 276 54.0
Sopen03g008630 Solanum pennellii HOM05D004996 ORTHO05D005844 2.4e-75 286.6 305 48.2
Solyc03g044470.4 Solanum lycopersicum HOM05D004996 ORTHO05D005844 3.1e-75 286.2 324 46.9
Nn7g36483 Nelumbo nucifera HOM05D004996 ORTHO05D005844 2.7e-74 283.1 321 48.0
MELO3C020912.2 Cucumis melo HOM05D004996 ORTHO05D005844 1.7e-73 280.4 269 50.9
SalBow6G7153 Salvia bowleyana HOM05D004996 ORTHO05D005844 1.7e-73 280.4 295 51.2
FAN01G0777 Fragaria x ananassa HOM05D004996 ORTHO05D005844 2.9e-73 279.6 336 49.7
Peaxi162Scf00685g00059 Petunia axillaris HOM05D004996 ORTHO05D005844 3.3e-72 276.2 299 48.8
TPR.G36603 Trifolium pratense HOM05D004996 ORTHO05D005844 5.6e-72 275.4 308 48.1
ClCG02G012610 Citrullus lanatus HOM05D004996 ORTHO05D005844 2.1e-71 273.5 269 48.3
CANSAT11G1602 Cannabis sativa HOM05D004996 ORTHO05D005844 3.6e-71 272.7 269 50.9
CsaV3_2G016730 Cucumis sativus L. HOM05D004996 ORTHO05D005844 3.6e-71 272.7 308 45.5
Hund13551 Selenicereus undatus HOM05D004996 ORTHO05D005844 3.6e-71 272.7 321 47.4
PSO210G5017 Papaver somniferum HOM05D004996 ORTHO05D005844 4.7e-71 272.3 309 46.3
vmacro17952 Vaccinium macrocarpon HOM05D004996 ORTHO05D005844 4.7e-71 272.3 326 47.9
CANSAT11G2671 Cannabis sativa HOM05D004996 ORTHO05D005844 1.0e-70 271.2 269 50.6
Sed0024126 Sechium edule HOM05D004996 ORTHO05D005844 1.4e-70 270.8 311 45.7
PSO170G3325 Papaver somniferum HOM05D004996 ORTHO05D005844 2.2e-68 263.5 311 45.7
Aqoxy5G01233 Aquilegia oxysepala HOM05D004996 ORTHO05D005844 4.1e-67 259.2 316 46.5
Atru.chr3.335 Acer truncatum HOM05D004996 ORTHO05D005844 1.6e-66 257.3 293 49.1
CDE02G2298 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 2.7e-66 256.5 311 45.7
Dinv29984 Davidia involucrata HOM05D004996 ORTHO05D005844 3.0e-65 253.1 261 53.6
unitig_736.g22663 Utricularia gibba HOM05D004996 ORTHO05D005844 1.9e-64 250.4 308 45.5
CDE02G3886 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 2.5e-64 250.0 269 48.0
SGA_v2.0_scaffold15G07296 Striga asiatica HOM05D004996 ORTHO05D005844 1.2e-63 247.7 276 50.0
QL06p041448 Quercus lobata HOM05D004996 ORTHO05D005844 2.6e-61 240.0 319 43.3
HPP92_028287 Vanilla planifolia HOM05D004996 ORTHO05D005844 5.8e-61 238.8 278 46.4
Haze_15405 Corylus avellana HOM05D004996 ORTHO05D005844 6.4e-60 235.3 311 41.8
Cfa004018 Carpinus fangiana HOM05D004996 ORTHO05D005844 8.3e-60 235.0 321 41.7
Ciclev10026248m.g Citrus clementina HOM05D004996 ORTHO05D005844 1.9e-59 233.8 273 45.8
TWI53G0428 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.6e-58 230.7 273 44.7
CsaV3_2G016720 Cucumis sativus L. HOM05D004996 ORTHO05D005844 3.0e-57 226.5 321 40.2
TPR.G36604 Trifolium pratense HOM05D004996 ORTHO05D005844 5.0e-57 225.7 207 54.6
ClCG02G012600 Citrullus lanatus HOM05D004996 ORTHO05D005844 1.5e-56 224.2 320 39.7
CiPaw.01G018500 Carya illinoinensis HOM05D004996 ORTHO05D005844 3.3e-56 223.0 324 39.2
ATR0009G017 Amborella trichopoda HOM05D004996 ORTHO05D005844 7.3e-56 221.9 310 41.0
MELO3C020913.2 Cucumis melo HOM05D004996 ORTHO05D005844 7.3e-56 221.9 315 40.6
Os10g0389200 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 8.1e-55 218.4 266 46.2
Zm00001eb027950 Zea mays HOM05D004996 ORTHO05D005844 1.1e-54 218.0 322 42.5
Hma1.2p1_0200F.1_g085860 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.4e-54 217.6 206 56.3
Hma1.2p1_2839F.1_g329298 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.4e-54 217.6 206 56.3
Ah.06g186350 Amaranthus hybridus HOM05D004996 ORTHO05D005844 1.8e-54 217.2 270 44.8
Sed0020584 Sechium edule HOM05D004996 ORTHO05D005844 5.2e-54 215.7 311 40.5
Atru.chr3.332 Acer truncatum HOM05D004996 ORTHO05D005844 2.6e-53 213.4 220 53.6
Potri.007G043700 Populus trichocarpa HOM05D004996 ORTHO05D005844 9.8e-53 211.5 318 39.0
CSS0031276 Camellia sinensis var. sinensis HOM05D004996 ORTHO05D005844 2.9e-52 209.9 200 54.0
TWI09G1278 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.6e-50 204.1 253 43.9
Sabra07G0038400 Salix brachista HOM05D004996 ORTHO05D005844 1.1e-48 198.0 312 39.7
SMO348G0076 Selaginella moellendorffii HOM05D004996 ORTHO05D005844 1.6e-47 194.1 263 41.1
Potri.007G043500 Populus trichocarpa HOM05D004996 ORTHO05D005844 7.6e-45 185.3 239 40.2
Hund13537 Selenicereus undatus HOM05D004996 ORTHO05D005844 2.2e-44 183.7 306 39.2
AUR62001931 Chenopodium quinoa HOM05D004996 ORTHO05D005844 3.8e-44 183.0 175 54.3
AagrBONN_evm.TU.Sc2ySwM_368.2728 Anthoceros agrestis HOM05D004996 ORTHO05D005844 3.2e-43 179.9 267 41.2
Pp3c15_3570 Physcomitrium patens HOM05D004996 ORTHO05D005844 2.3e-41 173.7 265 37.7
AagrBONN_evm.TU.Sc2ySwM_340.386 Anthoceros agrestis HOM05D004996 ORTHO05D005844 1.9e-40 170.6 265 36.6
HanXRQChr14g0442841 Helianthus annuus HOM05D004996 ORTHO05D005844 1.6e-39 167.5 180 50.0
Hund13538 Selenicereus undatus HOM05D004996 ORTHO05D005844 1.8e-38 164.1 310 36.1
Mapoly0002s0316 Marchantia polymorpha HOM05D004996 ORTHO05D005844 4.0e-38 162.9 263 36.9
Mapoly0007s0155 Marchantia polymorpha HOM05D004996 ORTHO05D005844 4.0e-38 162.9 284 34.5
Os10g0389300 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 1.1e-24 118.2 208 37.5
Dinv39853 Davidia involucrata HOM05D004996 ORTHO05D005844 1.8e-22 110.9 97 56.7
HPP92_019276 Vanilla planifolia HOM05D004996 ORTHO05D005844 6.7e-17 92.4 132 41.7
Hma1.2p1_0200F.1_g085850 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 5.6e-16 89.4 105 51.4
Hma1.2p1_2839F.1_g329297 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 5.6e-16 89.4 105 51.4
TPR.G22585 Trifolium pratense HOM05D004996 ORTHO05D005844 4.8e-15 86.3 84 52.4
Os10g0389100 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 9.0e-14 82.0 207 30.9
Mapoly0002s0315 Marchantia polymorpha HOM05D004996 ORTHO05D005844 4.9e-12 76.3 135 33.3
CBR_g39811 Chara braunii HOM05D004996 ORTHO05D005844 1.4e-11 74.7 264 26.5
CBR_g39828 Chara braunii HOM05D001539 ORTHO05D008140 2.5e-11 73.9 268 27.2
TPR.G22736 Trifolium pratense HOM05D004996 ORTHO05D005844 3.5e-10 70.1 87 42.5
CBR_g39812 Chara braunii HOM05D004996 ORTHO05D005844 6.0e-10 69.3 266 27.8
Atru.chr3.333 Acer truncatum HOM05D004996 ORTHO05D005844 4.8e-07 59.7 94 38.3


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