Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.1e-41 172.9 89 100.0
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.5e-40 169.1 89 96.6
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.5e-40 169.1 89 96.6
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 4.5e-40 167.5 89 95.5
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 5.9e-40 167.2 89 95.5
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 5.9e-40 167.2 89 95.5
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 5.9e-40 167.2 89 95.5
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.3e-39 166.0 89 94.4
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 1.7e-39 165.6 89 94.4
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 6.5e-39 163.7 89 93.3
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.7e-37 158.3 89 89.9
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.7e-34 149.1 89 86.5
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.6e-32 142.5 89 82.0
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 4.5e-32 141.0 89 80.9
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 5.9e-32 140.6 88 83.0
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.7e-31 139.0 89 79.8
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.7e-31 139.0 86 81.4
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 1.7e-31 139.0 89 79.8
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.7e-31 139.0 86 81.4
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 2.9e-31 138.3 89 78.7
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.8e-31 137.9 86 79.1
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 6.5e-31 137.1 89 77.5
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 1.1e-30 136.3 89 78.7
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.9e-30 135.6 89 77.5
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.2e-30 134.8 86 80.2
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.2e-30 134.8 89 78.7
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 3.2e-30 134.8 86 80.2
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 5.5e-30 134.0 89 77.5
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 5.5e-30 134.0 89 75.3
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 7.2e-30 133.7 89 75.3
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 9.4e-30 133.3 86 77.9
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 9.4e-30 133.3 88 77.3
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 2.1e-29 132.1 88 77.3
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 82.7
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.7e-29 131.0 86 76.7
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 6.1e-29 130.6 81 84.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 6.1e-29 130.6 81 84.0
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 73.0
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 8.0e-29 130.2 88 75.0
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 74.2
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 74.2
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 8.0e-29 130.2 89 71.9
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 1.4e-28 129.4 89 76.4
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 1.4e-28 129.4 89 70.8
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.4e-28 129.4 85 77.6
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.4e-28 129.4 86 75.6
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.3e-28 128.6 89 73.0
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 2.3e-28 128.6 89 73.0
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 2.3e-28 128.6 85 74.1
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 2.3e-28 128.6 86 75.6
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 3.0e-28 128.3 84 78.6
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 3.0e-28 128.3 89 76.4
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 3.0e-28 128.3 89 71.9
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 4.0e-28 127.9 84 77.4
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 4.0e-28 127.9 86 74.4
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 4.0e-28 127.9 86 74.4
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 5.2e-28 127.5 84 77.4
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 5.2e-28 127.5 89 76.4
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 6.7e-28 127.1 82 78.0
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 8.8e-28 126.7 85 76.5
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 8.8e-28 126.7 85 76.5
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 8.8e-28 126.7 91 70.3
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 8.8e-28 126.7 85 75.3
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 1.2e-27 126.3 89 71.9
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.2e-27 126.3 82 80.5
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 2.0e-27 125.6 81 76.5
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.3e-26 122.9 81 77.8
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 1.3e-26 122.9 81 71.6
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 3.7e-26 121.3 89 70.8
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 6.3e-26 120.6 89 67.4
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 6.3e-26 120.6 89 67.4
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 2.4e-25 118.6 86 68.6
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 2.7e-24 115.2 88 67.0
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 4.5e-24 114.4 87 69.0
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.0e-23 113.2 85 69.4
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.3e-23 112.8 74 78.4
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.9e-23 111.7 76 75.0
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 5.0e-23 110.9 89 64.0
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 6.5e-23 110.5 72 77.8
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 1.1e-22 109.8 83 65.1
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 5.5e-22 107.5 89 62.9
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 9.4e-22 106.7 72 76.4
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.4e-20 102.8 69 73.9
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 5.2e-20 100.9 83 66.3
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 5.2e-20 100.9 75 78.7
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.8e-20 100.1 69 72.5
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 8.8e-20 100.1 81 66.7
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.2e-19 99.8 77 75.3
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 5.7e-19 97.4 84 59.5
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.3e-18 96.3 73 63.0
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 4.8e-18 94.4 61 77.0
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 4.8e-18 94.4 73 63.0
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.4e-17 92.8 64 75.0
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 4.1e-17 91.3 83 61.4
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.2e-16 89.7 81 56.8
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.0e-16 89.0 56 83.9
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 3.5e-16 88.2 77 59.7
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 4.5e-16 87.8 75 61.3
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 5.9e-16 87.4 62 74.2
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.5e-14 82.0 64 68.8
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 2.8e-13 78.6 74 52.7
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 1.0e-12 76.6 96 52.1
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.0e-12 76.6 50 70.0
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 2.3e-12 75.5 50 72.0
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 3.4e-11 71.6 87 47.1
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 2.2e-10 68.9 89 52.8
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 9.2e-09 63.5 56 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.6e-08 62.8 62 46.8


User provided reference genes

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