Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 4.5e-36 154.1 78 100.0
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 1.2e-33 146.0 78 94.9
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 2.1e-33 145.2 77 93.5
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 3.6e-33 144.4 78 93.6
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 1.8e-32 142.1 78 92.3
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 4.0e-32 141.0 78 94.9
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 1.5e-31 139.0 77 88.3
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 1.5e-31 139.0 77 88.3
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 2.6e-31 138.3 78 91.0
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 9.8e-31 136.3 78 91.0
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 1.2e-28 129.4 78 85.9
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 1.7e-27 125.6 80 83.8
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 4.7e-25 117.5 75 73.3
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 2.3e-24 115.2 73 75.3
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 3.0e-24 114.8 77 72.7
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 3.0e-24 114.8 73 75.3
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 4.0e-24 114.4 75 74.7
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 6.8e-24 113.6 76 72.4
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 8.8e-24 113.2 71 74.6
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 1.2e-23 112.8 74 75.7
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.5e-23 112.5 71 73.2
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 2.0e-23 112.1 73 78.1
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 3.4e-23 111.3 76 75.0
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 3.4e-23 111.3 76 75.0
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 4.4e-23 110.9 71 76.1
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 4.4e-23 110.9 69 78.3
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 5.7e-23 110.5 71 74.6
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 7.5e-23 110.2 76 69.7
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 9.8e-23 109.8 71 74.6
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 9.8e-23 109.8 71 74.6
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 1.3e-22 109.4 71 71.8
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 1.7e-22 109.0 69 72.5
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 3.7e-22 107.8 71 74.6
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 4.9e-22 107.5 76 73.7
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 4.9e-22 107.5 71 73.2
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 8.3e-22 106.7 72 72.2
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 1.1e-21 106.3 71 67.6
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 1.4e-21 105.9 76 67.1
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 2.4e-21 105.1 76 72.4
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 5.4e-21 104.0 71 73.2
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 7.0e-21 103.6 69 75.4
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 9.1e-21 103.2 76 68.4
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 9.1e-21 103.2 71 71.8
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.6e-20 102.4 71 67.6
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 1.6e-20 102.4 76 69.7
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 5.9e-20 100.5 71 66.2
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 7.7e-20 100.1 71 70.4
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 1.3e-19 99.4 71 67.6
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 1.3e-19 99.4 78 67.9
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 2.3e-19 98.6 73 68.5
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 2.3e-19 98.6 76 64.5
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 2.3e-19 98.6 75 68.0
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.9e-19 98.2 71 66.2
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 3.8e-19 97.8 76 65.8
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 6.6e-19 97.1 71 67.6
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 6.6e-19 97.1 71 64.8
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 6.6e-19 97.1 77 64.9
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 6.6e-19 97.1 65 72.3
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 1.1e-18 96.3 74 63.5
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 1.9e-18 95.5 67 68.7
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 2.5e-18 95.1 71 66.2
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 2.5e-18 95.1 75 66.7
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 3.3e-18 94.7 75 65.3
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 5.5e-18 94.0 71 59.2
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 7.2e-18 93.6 75 61.3
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 7.2e-18 93.6 76 63.2
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 4.7e-17 90.9 60 73.3
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 1.0e-16 89.7 60 71.7
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 1.0e-16 89.7 60 71.7
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 1.0e-16 89.7 43 97.7
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 1.4e-16 89.4 66 65.2
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 1.4e-16 89.4 72 62.5
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 1.5e-15 85.9 82 57.3
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 1.5e-15 85.9 71 60.6
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 7.5e-15 83.6 71 54.9
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 9.8e-15 83.2 85 50.6
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 1.3e-14 82.8 53 73.6
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 6.3e-14 80.5 81 51.9
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 8.3e-14 80.1 54 70.4
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 1.1e-13 79.7 56 62.5
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 4.1e-13 77.8 54 68.5
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 4.6e-12 74.3 62 56.5
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 5.0e-11 70.9 52 67.3
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 1.9e-10 68.9 58 63.8
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 7.3e-10 67.0 53 60.4
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 1.0e-08 63.2 52 51.9
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 1.8e-08 62.4 52 65.4
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 8.9e-08 60.1 43 62.8
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 1.2e-07 59.7 52 59.6
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 2.0e-07 58.9 37 62.2
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 4.4e-07 57.8 70 47.1


User provided reference genes

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