Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g33090 Schrenkiella parvula HOM05D005913 ORTHO05D007138 5.6e-71 270.8 133 100.0
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.0e-16 90.5 162 43.2
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.0e-16 90.5 162 43.2
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 2.3e-16 89.4 150 43.3
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 2.3e-16 89.4 150 43.3
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 2.3e-16 89.4 134 45.5
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 1.5e-15 86.7 150 39.3
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 1.4e-13 80.1 150 37.3
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 3.2e-13 79.0 150 36.7
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 2.0e-12 76.3 139 39.6
BcaC07g42450 Brassica carinata HOM05D005913 ORTHO05D007138 9.5e-10 67.4 133 39.1
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 9.5e-10 67.4 133 39.1
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 1.0e-08 63.9 157 33.8
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 4.0e-08 62.0 157 32.5
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 8.9e-08 60.8 147 32.0
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 7.5e-07 57.8 149 32.9
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 1.3e-06 57.0 149 36.2
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 1.3e-06 57.0 149 36.2
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 2.9e-06 55.8 143 32.9


User provided reference genes

Program Settings