Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 9.2e-65 250.0 118 100.0
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 1.7e-63 245.7 118 98.3
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 1.7e-63 245.7 118 98.3
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 1.7e-63 245.7 118 98.3
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 1.7e-63 245.7 118 98.3
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 5.0e-63 244.2 118 97.5
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 6.6e-63 243.8 118 97.5
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 6.6e-63 243.8 118 97.5
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 1.1e-62 243.0 118 97.5
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 3.3e-62 241.5 118 96.6
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 3.3e-62 241.5 118 95.8
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 4.3e-62 241.1 118 95.8
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 4.3e-62 241.1 118 95.8
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 4.3e-62 241.1 118 95.8
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 4.3e-62 241.1 118 95.8
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 4.3e-62 241.1 118 95.8
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 8.0e-61 236.9 117 95.7
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 8.0e-61 236.9 118 94.9
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 1.4e-60 236.1 118 92.4
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 1.8e-60 235.7 118 94.1
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 1.4e-57 226.1 153 75.2
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 1.4e-57 226.1 118 88.1
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 2.5e-54 215.3 110 90.9
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.8e-53 211.8 116 84.5
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.8e-53 211.8 116 84.5
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 3.6e-53 211.5 116 84.5
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 8.0e-53 210.3 116 84.5
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.0e-52 209.9 116 84.5
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.0e-52 209.9 116 84.5
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.4e-52 209.5 116 83.6
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.4e-52 209.5 116 84.5
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 3.1e-52 208.4 116 83.6
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 8.9e-52 206.8 116 81.9
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 3.4e-51 204.9 116 81.9
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 3.4e-51 204.9 114 83.3
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 4.4e-51 204.5 116 81.9
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 5.8e-51 204.1 112 83.0
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 9.8e-51 203.4 116 80.2
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 9.8e-51 203.4 116 80.2
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 1.7e-50 202.6 116 81.0
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.7e-50 202.6 113 81.4
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 1.7e-50 202.6 116 80.2
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 2.2e-50 202.2 115 80.9
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 2.2e-50 202.2 115 81.7
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 2.9e-50 201.8 116 79.3
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 6.4e-50 200.7 116 78.4
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 8.3e-50 200.3 116 78.4
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 1.1e-49 199.9 112 81.2
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 1.1e-49 199.9 116 78.4
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 1.1e-49 199.9 116 79.3
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 1.4e-49 199.5 112 80.4
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.4e-49 199.5 116 79.3
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 1.4e-49 199.5 114 80.7
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 3.2e-49 198.4 115 77.4
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 4.1e-49 198.0 113 80.5
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 5.4e-49 197.6 112 82.1
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 5.4e-49 197.6 116 79.3
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 7.0e-49 197.2 116 78.4
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.2e-48 196.4 113 79.6
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 1.2e-48 196.4 116 78.4
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 112 77.7
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.2e-48 196.4 112 77.7
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.2e-48 196.4 115 76.5
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 1.6e-48 196.1 112 81.2
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 2.0e-48 195.7 117 77.8
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 2.0e-48 195.7 115 78.3
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 2.7e-48 195.3 113 78.8
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 2.7e-48 195.3 111 79.3
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 3.5e-48 194.9 118 78.8
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 3.5e-48 194.9 112 79.5
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 3.5e-48 194.9 111 81.1
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 4.6e-48 194.5 112 78.6
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 4.6e-48 194.5 112 77.7
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 7.8e-48 193.7 113 77.0
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 7.8e-48 193.7 112 79.5
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 1.0e-47 193.4 113 77.9
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 1.0e-47 193.4 116 75.9
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.0e-47 193.4 115 76.5
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 1.3e-47 193.0 112 78.6
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 1.3e-47 193.0 116 75.9
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 1.3e-47 193.0 113 77.0
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 1.7e-47 192.6 111 78.4
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 1.7e-47 192.6 113 77.0
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.3e-47 192.2 113 76.1
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 2.3e-47 192.2 113 77.0
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 2.3e-47 192.2 115 77.4
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 3.0e-47 191.8 115 74.8
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 3.0e-47 191.8 116 77.6
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 3.9e-47 191.4 112 73.2
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 5.0e-47 191.0 113 75.2
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 6.6e-47 190.7 113 77.9
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 8.6e-47 190.3 116 75.0
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 1.5e-46 189.5 108 80.6
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 1.9e-46 189.1 108 79.6
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 1.9e-46 189.1 115 75.7
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 3.3e-46 188.3 116 75.9
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 4.3e-46 188.0 115 73.0
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 1.2e-45 186.4 113 72.6
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 1.2e-45 186.4 115 73.0
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 2.1e-45 185.7 116 75.9
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 2.8e-45 185.3 111 74.8
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 3.6e-45 184.9 112 77.7
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 8.1e-45 183.7 137 65.7
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 8.1e-45 183.7 111 74.8
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 1.5e-43 179.5 104 75.0
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 2.0e-43 179.1 104 75.0
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 2.0e-43 179.1 118 76.3
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 4.4e-43 177.9 103 76.7
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.2e-42 175.6 105 78.1
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 4.9e-42 174.5 116 72.4
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 4.9e-42 174.5 104 78.8
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 1.9e-41 172.6 101 75.2
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 2.4e-41 172.2 102 78.4
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 3.2e-41 171.8 104 76.9
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 4.1e-41 171.4 109 73.4
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 5.4e-41 171.0 105 70.5
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 3.5e-40 168.3 180 50.0
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 6.6e-39 164.1 101 72.3
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 1.1e-38 163.3 95 81.1
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 1.1e-38 163.3 121 65.3
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 6.8e-36 154.1 91 79.1
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 3.8e-34 148.3 115 63.5
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 1.2e-32 143.3 112 58.0
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 3.5e-32 141.7 113 54.0
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 6.0e-32 141.0 115 61.7
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 1.3e-31 139.8 111 56.8
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 7.3e-30 134.0 85 70.6
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 4.7e-29 131.3 109 53.2
CBR_g22898 Chara braunii HOM05D000019 ORTHO05D000048 3.2e-25 118.6 114 50.0
BolC3t20846H Brassica oleracea HOM05D005368 ORTHO05D006417 7.1e-25 117.5 83 75.9
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 2.1e-24 115.9 103 52.4
Gohir.A13G090800 Gossypium hirsutum HOM05D005368 ORTHO05D006417 7.8e-24 114.0 85 67.1
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 1.7e-23 112.8 99 53.5
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 1.5e-22 109.8 58 77.6
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.6e-21 106.3 60 75.0
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 1.6e-21 106.3 57 78.9
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 2.1e-21 105.9 91 57.1
BcaNung04613 Brassica carinata HOM05D005368 ORTHO05D006417 1.1e-20 103.6 55 87.3
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 9.0e-20 100.5 58 74.1
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 2.6e-19 99.0 113 47.8
MCO15G169 Micromonas commoda HOM05D005368 ORTHO05D006417 9.9e-19 97.1 96 49.0
BcaNung02377 Brassica carinata HOM05D005368 ORTHO05D006417 1.7e-18 96.3 47 91.5
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 1.9e-17 92.8 152 38.8
Migut.B00174 Erythranthe guttata HOM05D005368 ORTHO05D006417 1.6e-16 89.7 55 76.4
HanXRQChr17g0544121 Helianthus annuus HOM05D005368 ORTHO05D006417 4.6e-16 88.2 58 77.6
MD05G1026100 Malus domestica HOM05D005333 ORTHO05D005776 2.5e-14 82.4 79 55.7
Cre11.g467668 Chlamydomonas reinhardtii HOM05D005368 ORTHO05D006417 2.4e-09 65.9 99 35.4
VMungo0540G1094 Vigna mungo HOM05D003030 ORTHO05D006417 4.3e-06 55.1 82 42.7


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