Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g32050 Schrenkiella parvula HOM05D003477 ORTHO05D004043 1.2e-30 136.3 98 100.0
AL7G17010 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 5.9e-25 117.5 98 82.7
Thhalv10026653m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 1.3e-24 116.3 92 93.5
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 2.9e-24 115.2 92 92.4
CARHR242520 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.1e-23 113.2 98 81.6
Carub.0007s0610 Capsella rubella HOM05D003477 ORTHO05D004043 2.5e-23 112.1 98 64.3
AT4G34265 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 1.8e-21 105.9 92 76.1
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 5.2e-21 104.4 92 79.3
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 1.1e-20 103.2 92 79.3
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 2.0e-20 102.4 92 79.3
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 2.0e-20 102.4 92 79.3
Cpa.g.sc106.115 Carica papaya HOM05D003477 ORTHO05D004043 3.3e-20 101.7 99 74.7
Aa31LG2G16840 Aethionema arabicum HOM05D003477 ORTHO05D004043 6.3e-19 97.4 92 58.7
Aa31LG8G13000 Aethionema arabicum HOM05D003477 ORTHO05D004043 1.1e-18 96.7 92 76.1
CARHR105430 Cardamine hirsuta HOM05D003477 ORTHO05D004043 1.6e-17 92.8 92 56.5
AL3G46800 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 3.5e-17 91.7 92 71.7
AT2G15000 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 3.5e-17 91.7 92 71.7
Sp3g28420 Schrenkiella parvula HOM05D003477 ORTHO05D004043 3.5e-17 91.7 92 71.7
Thhalv10022939m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 4.5e-17 91.3 93 54.8
BcaB08g34577 Brassica carinata HOM05D003477 ORTHO05D004043 1.0e-16 90.1 92 70.7
A03p45360 Brassica napus HOM05D003477 ORTHO05D004043 1.0e-16 90.1 92 52.2
BraA03t13668Z Brassica rapa HOM05D003477 ORTHO05D004043 1.0e-16 90.1 92 52.2
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 1.7e-16 89.4 53 83.0
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 2.2e-16 89.0 93 55.9
BcaC01g03075 Brassica carinata HOM05D003477 ORTHO05D004043 2.5e-15 85.5 92 56.5
C03p56260 Brassica napus HOM05D003477 ORTHO05D004043 2.5e-15 85.5 92 56.5
BolC3t17914H Brassica oleracea HOM05D003477 ORTHO05D004043 2.5e-15 85.5 92 56.5
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 3.2e-15 85.1 99 50.5
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 7.2e-15 84.0 99 49.5
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 9.4e-15 83.6 99 50.5
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 9.4e-15 83.6 99 49.5
A07p05410 Brassica napus HOM05D003477 ORTHO05D004043 2.1e-14 82.4 92 71.7
C07p08710 Brassica napus HOM05D003477 ORTHO05D004043 2.1e-14 82.4 92 71.7
BolC7t41282H Brassica oleracea HOM05D003477 ORTHO05D004043 2.1e-14 82.4 92 71.7
BraA07t28337Z Brassica rapa HOM05D003477 ORTHO05D004043 2.1e-14 82.4 92 71.7
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 2.1e-14 82.4 99 49.5
BcaC06g36034 Brassica carinata HOM05D003477 ORTHO05D004043 2.7e-14 82.0 93 72.0
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 4.7e-14 81.3 99 51.5
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 4.7e-14 81.3 53 77.4
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 4.7e-14 81.3 53 77.4
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 8.0e-14 80.5 99 48.5
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 8.0e-14 80.5 96 54.2
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 1.0e-13 80.1 99 46.5
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 1.4e-13 79.7 46 78.3
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 2.3e-13 79.0 46 76.1
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.0e-13 78.6 53 79.2
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.0e-13 78.6 53 79.2
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 3.0e-13 78.6 92 48.9
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 3.0e-13 78.6 99 51.5
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 4.0e-13 78.2 92 47.8
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 5.2e-13 77.8 92 52.2
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 6.8e-13 77.4 92 50.0
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 6.8e-13 77.4 92 50.0
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 8.8e-13 77.0 92 46.7
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 8.8e-13 77.0 46 78.3
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 8.8e-13 77.0 92 48.9
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 8.8e-13 77.0 46 78.3
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 1.2e-12 76.6 53 79.2
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 1.5e-12 76.3 45 68.9
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 2.0e-12 75.9 92 43.5
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 2.0e-12 75.9 92 47.8
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 2.6e-12 75.5 46 73.9
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 2.6e-12 75.5 92 48.9
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 2.6e-12 75.5 92 47.8
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 3.4e-12 75.1 92 46.7
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 4.4e-12 74.7 92 42.4
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 4.4e-12 74.7 46 76.1
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 5.7e-12 74.3 46 76.1
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 5.7e-12 74.3 98 44.9
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 7.5e-12 73.9 46 71.7
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 7.5e-12 73.9 92 46.7
BcaNung04987 Brassica carinata HOM05D003477 ORTHO05D004043 9.8e-12 73.6 92 52.2
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 1.3e-11 73.2 92 50.0
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.3e-11 73.2 45 75.6
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 2.2e-11 72.4 46 73.9
Lalb_Chr21g0308261 Lupinus albus HOM05D003477 ORTHO05D004043 2.8e-11 72.0 52 65.4
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 2.8e-11 72.0 46 73.9
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 3.7e-11 71.6 94 48.9
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 4.8e-11 71.2 92 43.5
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 4.8e-11 71.2 92 43.5
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 4.8e-11 71.2 52 75.0
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 4.8e-11 71.2 99 49.5
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 6.3e-11 70.9 46 73.9
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 6.3e-11 70.9 46 69.6
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 8.3e-11 70.5 92 47.8
BcaC01g03076 Brassica carinata HOM05D003477 ORTHO05D004043 8.3e-11 70.5 47 70.2
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 8.3e-11 70.5 103 49.5
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 8.3e-11 70.5 46 73.9
Potri.001G298800 Populus trichocarpa HOM05D003477 ORTHO05D004043 8.3e-11 70.5 92 47.8
TPR.G19065 Trifolium pratense HOM05D003477 ORTHO05D004043 8.3e-11 70.5 51 72.5
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 1.1e-10 70.1 46 71.7
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 1.1e-10 70.1 50 74.0
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.4e-10 69.7 44 70.5
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.8e-10 69.3 93 43.0
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 2.4e-10 68.9 45 62.2
Sc08g0001310 Simmondsia chinensis HOM05D003477 ORTHO05D004043 2.4e-10 68.9 53 64.2
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 3.1e-10 68.6 46 69.6
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 3.1e-10 68.6 46 69.6
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 4.1e-10 68.2 92 47.8
Duzib248G0862 Durio zibethinus HOM05D003477 ORTHO05D004043 4.1e-10 68.2 50 64.0
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 4.1e-10 68.2 46 71.7
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 5.4e-10 67.8 92 52.2
Actinidia27974 Actinidia chinensis HOM05D003477 ORTHO05D004043 7.0e-10 67.4 38 78.9
Sed0021400 Sechium edule HOM05D003477 ORTHO05D004043 7.0e-10 67.4 92 43.5
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 9.1e-10 67.0 46 69.6
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 9.1e-10 67.0 92 46.7
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 9.1e-10 67.0 41 70.7
PSO675G6764 Papaver somniferum HOM05D003477 ORTHO05D004043 1.2e-09 66.6 97 40.2
ATR0315G039 Amborella trichopoda HOM05D003477 ORTHO05D004043 1.6e-09 66.2 41 70.7
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 1.6e-09 66.2 46 69.6
Potri.009G093400 Populus trichocarpa HOM05D003477 ORTHO05D004043 1.6e-09 66.2 92 50.0
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 2.0e-09 65.9 45 66.7
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.7e-09 65.5 46 67.4
Prupe.6G226300 Prunus persica HOM05D003477 ORTHO05D004043 2.7e-09 65.5 96 37.5
RcHm_v2.0_Chr2g0107061 Rosa chinensis HOM05D003477 ORTHO05D004043 2.7e-09 65.5 93 39.8
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 3.5e-09 65.1 92 46.7
Ca_24733_v3 Cicer arietinum L. HOM05D002634 ORTHO05D003100 3.5e-09 65.1 44 68.2
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 3.5e-09 65.1 41 68.3
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 3.5e-09 65.1 41 68.3
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 3.5e-09 65.1 41 68.3
Sabra09G0072000 Salix brachista HOM05D003477 ORTHO05D004043 3.5e-09 65.1 92 52.2
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 3.5e-09 65.1 92 41.3
FvH4_1g16960 Fragaria vesca HOM05D003477 ORTHO05D004043 4.5e-09 64.7 46 60.9
FAN23G2670 Fragaria x ananassa HOM05D003477 ORTHO05D004043 4.5e-09 64.7 46 60.9
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 4.5e-09 64.7 53 67.9
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 4.5e-09 64.7 92 42.4
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 4.5e-09 64.7 46 69.6
MD02G1179900 Malus domestica HOM05D003477 ORTHO05D004043 5.9e-09 64.3 94 40.4
Sed0004332 Sechium edule HOM05D003477 ORTHO05D004043 5.9e-09 64.3 53 66.0
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 7.7e-09 63.9 43 67.4
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 7.7e-09 63.9 42 69.0
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 7.7e-09 63.9 45 66.7
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 7.7e-09 63.9 48 66.7
Actinidia34393 Actinidia chinensis HOM05D003477 ORTHO05D004043 1.0e-08 63.5 92 44.6
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 1.0e-08 63.5 46 63.0
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 1.0e-08 63.5 46 67.4
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.0e-08 63.5 46 67.4
Lj2g0006602 Lotus japonicus HOM05D003477 ORTHO05D004043 1.3e-08 63.2 44 65.9
DCAR_025766 Daucus carota HOM05D003477 ORTHO05D004043 1.7e-08 62.8 40 67.5
FAN28G0243 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.7e-08 62.8 46 58.7
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 1.7e-08 62.8 44 65.9
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 2.2e-08 62.4 54 64.8
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.2e-08 62.4 46 67.4
FAN26G2600 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.2e-08 62.4 43 62.8
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 2.2e-08 62.4 44 68.2
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 2.2e-08 62.4 44 65.9
Medtr5g016330 Medicago truncatula HOM05D003477 ORTHO05D004043 2.9e-08 62.0 42 69.0
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 2.9e-08 62.0 48 64.6
Cfa004078 Carpinus fangiana HOM05D003477 ORTHO05D004043 3.8e-08 61.6 46 63.0
FAN19G2238 Fragaria x ananassa HOM05D003477 ORTHO05D004043 5.0e-08 61.2 43 62.8
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 6.5e-08 60.8 92 44.6
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 6.5e-08 60.8 95 42.1
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 6.5e-08 60.8 46 67.4
Cfa004605 Carpinus fangiana HOM05D003477 ORTHO05D004043 1.5e-07 59.7 44 68.2
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 1.5e-07 59.7 44 68.2
HanXRQChr09g0251061 Helianthus annuus HOM05D003477 ORTHO05D004043 1.5e-07 59.7 43 69.8
Atru.chr3.235 Acer truncatum HOM05D003477 ORTHO05D004043 1.9e-07 59.3 41 61.0
Lalb_Chr02g0145231 Lupinus albus HOM05D003477 ORTHO05D004043 2.5e-07 58.9 47 59.6
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 2.5e-07 58.9 94 43.6
Atru.chr5.2447 Acer truncatum HOM05D003477 ORTHO05D004043 3.2e-07 58.5 92 41.3
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.2e-07 58.5 41 63.4
Lsat_1_v5_gn_2_85381 Lactuca sativa HOM05D003477 ORTHO05D004043 5.5e-07 57.8 39 69.2
CsaV3_3G018130 Cucumis sativus L. HOM05D003477 ORTHO05D004043 7.2e-07 57.4 94 42.6
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 7.2e-07 57.4 92 41.3
Cc07_g06600 Coffea canephora HOM05D003477 ORTHO05D004043 1.2e-06 56.6 41 65.9
Glyma.01G190500 Glycine max HOM05D003477 ORTHO05D004043 1.2e-06 56.6 44 61.4
ECA238G3264 Erigeron canadensis HOM05D003477 ORTHO05D004043 1.6e-06 56.2 38 65.8
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.1e-06 55.8 36 72.2
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.1e-06 55.8 36 72.2
Ciclev10027007m.g Citrus clementina HOM05D003477 ORTHO05D004043 2.1e-06 55.8 34 67.6
Glyma.10G260750 Glycine max HOM05D003511 ORTHO05D004403 2.1e-06 55.8 52 59.6
Lalb_Chr05g0226121 Lupinus albus HOM05D003477 ORTHO05D004043 2.1e-06 55.8 42 59.5
PGSC0003DMG400024979 Solanum tuberosum HOM05D003477 ORTHO05D004043 2.1e-06 55.8 41 58.5
VMungo1215G1682 Vigna mungo HOM05D002634 ORTHO05D003100 3.6e-06 55.1 39 64.1
Sopen02g037390 Solanum pennellii HOM05D003477 ORTHO05D004043 4.7e-06 54.7 41 58.5
Solyc02g092830.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 6.1e-06 54.3 41 58.5


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