Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 2.1e-133 479.2 269 100.0
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 2.1e-109 399.4 252 92.1
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 3.8e-106 388.7 252 92.1
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 1.6e-104 383.3 252 83.7
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 1.7e-103 379.8 252 87.7
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 6.2e-101 371.3 251 87.6
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 2.2e-98 362.8 259 77.6
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 1.0e-95 354.0 252 84.5
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 2.8e-93 345.9 247 79.8
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 3.6e-93 345.5 247 79.8
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.1e-76 290.8 209 81.3
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.3e-69 267.3 196 84.2
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 6.3e-69 265.0 258 67.4
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 1.0e-58 231.1 221 62.9
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 2.9e-58 229.6 252 56.7
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 1.1e-57 227.6 256 58.2
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 2.5e-57 226.5 145 79.3
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.2e-57 225.7 148 73.0
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 9.4e-57 224.6 148 73.0
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 2.1e-56 223.4 167 72.5
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 7.9e-56 221.5 251 59.4
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 1.8e-55 220.3 258 57.0
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 3.9e-55 219.2 212 60.4
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 3.9e-55 219.2 256 57.8
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 3.9e-55 219.2 256 57.8
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 5.2e-55 218.8 251 56.6
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 8.8e-55 218.0 256 57.8
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 8.8e-55 218.0 127 83.5
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.1e-54 217.6 230 62.2
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.5e-54 217.2 124 80.6
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 2.0e-54 216.9 151 73.5
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 2.6e-54 216.5 259 56.8
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 3.3e-54 216.1 130 82.3
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 4.4e-54 215.7 209 59.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.7e-53 213.8 262 55.3
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 2.2e-53 213.4 155 65.8
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 3.7e-53 212.6 122 84.4
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 4.8e-53 212.2 249 50.2
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 6.3e-53 211.8 263 52.5
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 6.3e-53 211.8 153 68.0
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 8.2e-53 211.5 155 69.0
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 1.1e-52 211.1 127 79.5
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 2.4e-52 209.9 153 69.9
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 2.4e-52 209.9 127 80.3
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 4.1e-52 209.1 260 56.2
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 7.0e-52 208.4 252 52.0
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 7.0e-52 208.4 127 75.6
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.2e-51 207.6 144 68.1
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 2.0e-51 206.8 228 56.1
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 2.6e-51 206.5 139 73.4
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 2.6e-51 206.5 250 50.0
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 5.9e-51 205.3 140 71.4
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 5.9e-51 205.3 129 72.9
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 5.9e-51 205.3 153 67.3
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 7.7e-51 204.9 248 51.2
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 7.7e-51 204.9 126 80.2
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 1.3e-50 204.1 166 60.8
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 2.9e-50 203.0 159 66.7
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.9e-50 203.0 126 73.0
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 2.9e-50 203.0 136 69.9
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 3.8e-50 202.6 126 77.8
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 8.5e-50 201.4 260 50.0
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 7.2e-49 198.4 124 78.2
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 7.2e-49 198.4 127 72.4
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 9.4e-49 198.0 127 73.2
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 9.4e-49 198.0 136 66.9
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.1e-48 196.8 124 76.6
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 4.7e-48 195.7 127 71.7
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 6.1e-48 195.3 234 50.9
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 1.0e-47 194.5 153 60.8
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 4.0e-47 192.6 256 46.9
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 4.0e-47 192.6 144 63.2
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 3.3e-46 189.5 109 82.6
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.3e-45 187.6 248 47.2
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.7e-45 187.2 115 78.3
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 2.2e-45 186.8 138 63.8
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 2.8e-45 186.4 145 66.9
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 2.8e-45 186.4 125 66.4
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.7e-45 186.0 159 57.2
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 8.2e-45 184.9 133 63.9
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.8e-44 183.7 130 66.9
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 3.1e-44 183.0 235 49.4
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 4.1e-44 182.6 223 58.3
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 4.1e-44 182.6 147 59.2
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 5.3e-44 182.2 165 55.2
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 9.1e-44 181.4 131 67.9
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 4.5e-43 179.1 125 64.8
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 5.9e-43 178.7 130 66.2
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 7.7e-43 178.3 127 63.8
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.2e-42 176.8 124 66.1
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 3.8e-42 176.0 229 48.5
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 5.0e-42 175.6 127 63.0
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 1.9e-41 173.7 145 62.1
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 4.2e-41 172.6 130 61.5
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 1.2e-40 171.0 109 76.1
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.6e-40 170.6 226 48.2
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 4.7e-40 169.1 146 52.7
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.0e-39 166.4 252 43.7
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 4.0e-39 166.0 109 74.3
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 3.4e-38 162.9 121 63.6
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 9.8e-38 161.4 125 60.0
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 4.1e-36 156.0 97 73.2
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 8.6e-34 148.3 125 59.2
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 8.6e-34 148.3 125 59.2
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 3.6e-32 142.9 90 75.6
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 5.2e-31 139.0 149 48.3
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 5.4e-28 129.0 132 47.7
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 1.6e-27 127.5 133 49.6
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 8.6e-26 121.7 92 62.0
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.2e-22 111.3 249 41.4
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 3.1e-15 86.7 113 45.1
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 2.0e-14 84.0 51 80.4
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 4.9e-13 79.3 154 33.1
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 6.4e-13 79.0 48 72.9
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 9.5e-09 65.1 105 34.3
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 8.9e-07 58.5 98 28.6


User provided reference genes

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