Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g31170 Schrenkiella parvula HOM05D010996 ORTHO05D009840 1.1e-50 203.0 100 100.0
A03p62020 Brassica napus HOM05D010996 ORTHO05D009840 5.2e-37 157.5 100 82.0
BraA03t15242Z Brassica rapa HOM05D010996 ORTHO05D009840 5.2e-37 157.5 100 82.0
BcaC09g52160 Brassica carinata HOM05D010996 ORTHO05D009840 6.8e-37 157.1 101 82.2
C01p05220 Brassica napus HOM05D010996 ORTHO05D009840 4.4e-36 154.5 101 80.2
C07p59670 Brassica napus HOM05D010996 ORTHO05D009840 4.4e-36 154.5 100 80.0
BolC1t00501H Brassica oleracea HOM05D010996 ORTHO05D009840 4.4e-36 154.5 101 80.2
BcaNung02175 Brassica carinata HOM05D010996 ORTHO05D009840 1.3e-35 152.9 98 80.6
A01p04810 Brassica napus HOM05D010996 ORTHO05D009840 1.1e-34 149.8 100 79.0
BraA01t00464Z Brassica rapa HOM05D010996 ORTHO05D009840 1.1e-34 149.8 100 79.0
AT4G33467 Arabidopsis thaliana HOM05D010996 ORTHO05D009840 3.6e-30 134.8 104 68.3
BolC7t46412H Brassica oleracea HOM05D010996 ORTHO05D009840 6.2e-30 134.0 90 77.8
AL7G18090 Arabidopsis lyrata HOM05D010996 ORTHO05D009840 5.3e-29 131.0 102 67.6
CARHR241540 Cardamine hirsuta HOM05D010996 ORTHO05D009840 1.2e-28 129.8 103 68.9
Carub.0007s0701 Capsella rubella HOM05D010996 ORTHO05D009840 4.4e-28 127.9 104 65.4
Thhalv10026675m.g Eutrema salsugineum HOM05D010996 ORTHO05D009840 7.6e-28 127.1 95 73.7
BcaNung05339 Brassica carinata HOM05D000119 ORTHO05D000054 9.3e-18 93.6 57 80.7
THA.LOC104819498 Tarenaya hassleriana HOM05D010996 ORTHO05D009840 2.0e-12 75.9 96 50.0
Aa31sc146G10 Aethionema arabicum HOM05D010996 ORTHO05D009840 1.1e-10 70.1 54 64.8
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 1.8e-08 62.8 94 42.6
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 1.8e-08 62.8 101 41.6
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 3.0e-08 62.0 97 43.3
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 1.1e-07 60.1 93 44.1
Potri.005G058800 Populus trichocarpa HOM05D008093 ORTHO05D009840 1.5e-07 59.7 102 42.2
Hma1.2p1_0476F.1_g160900 Hydrangea macrophylla HOM05D008093 ORTHO05D009840 2.5e-07 58.9 97 46.4
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 2.5e-07 58.9 101 45.5
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 2.5e-07 58.9 106 43.4
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 4.3e-07 58.2 93 41.9
Nitab4.5_0002667g0080 Nicotiana tabacum HOM05D008093 ORTHO05D009840 4.3e-07 58.2 99 43.4
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 4.3e-07 58.2 105 42.9
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 5.7e-07 57.8 99 44.4
Medtr8g093620 Medicago truncatula HOM05D008093 ORTHO05D009840 7.4e-07 57.4 96 42.7
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 1.3e-06 56.6 91 41.8
CsaV3_2G018270 Cucumis sativus L. HOM05D008093 ORTHO05D009840 2.1e-06 55.8 99 46.5
Psat7g045640 Pisum sativum HOM05D008093 ORTHO05D009840 2.8e-06 55.5 95 40.0
QL06p028768 Quercus lobata HOM05D008093 ORTHO05D009840 2.8e-06 55.5 50 58.0
COL.COLO4_35729 Corchorus olitorius HOM05D008093 ORTHO05D009840 3.7e-06 55.1 92 38.0
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 3.7e-06 55.1 100 43.0
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 3.7e-06 55.1 106 42.5
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 6.2e-06 54.3 92 39.1
CiPaw.04G083000 Carya illinoinensis HOM05D008093 ORTHO05D009840 8.2e-06 53.9 94 41.5
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 8.2e-06 53.9 94 42.6
Lalb_Chr12g0203141 Lupinus albus HOM05D008093 ORTHO05D009840 8.2e-06 53.9 101 36.6


User provided reference genes

Program Settings